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Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1798 51.19 0 1976656..1978341 - 561 170081461 fadD ECDH10B_1943 - acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) 1799 53.61 0 1978546..1979127 - 193 170081462 yeaY ECDH10B_1944 - lipoprotein 1800 55.60 0 1979167..1979862 - 231 170081463 yeaZ ECDH10B_1945 - peptidase 1801 55.21 0 1979920..1981830 - 636 170081464 yoaA ECDH10B_1946 - hypothetical protein 1802 51.59 0 1981962..1982306 + 114 170081465 yoaB ECDH10B_1947 - hypothetical protein 1803 41.67 -1 1982668..1983027 + 119 170081466 yoaC ECDH10B_1948 - hypothetical protein 1804 56.11 +1 1983147..1983326 - 59 170081467 yoaH ECDH10B_1949 - hypothetical protein 1805 54.92 0 1984765..1985343 + 192 170081468 yeaB ECDH10B_1951 - NUDIX hydrolase 1806 53.99 0 1985527..1986891 + 454 170081469 sdaA ECDH10B_1952 - L-serine deaminase I 1807 50.53 0 1987022..1988620 + 532 170081470 yoaD ECDH10B_1953 - phosphodiesterase 1808 53.89 0 1988624..1990180 - 518 170081471 yoaE ECDH10B_1954 - fused membrane protein; protein 1809 50.31 0 1990643..1991614 + 323 170081472 manX ECDH10B_1955 - fused mannose-specific PTS enzymes: IIA component; IIB component 1810 51.56 0 1991677..1992477 + 266 170081473 manY ECDH10B_1956 - mannose-specific enzyme IIC component of PTS 1811 52.73 0 1992481..1993341 + 286 170081474 manZ ECDH10B_1957 - mannose-specific enzyme IID component of PTS 1812 45.10 -1 1993396..1993854 + 152 170081475 yobD ECDH10B_1958 - inner membrane protein 1813 51.68 0 1994283..1994849 + 188 170081476 yebN ECDH10B_1959 - inner membrane protein 1814 51.36 0 1994846..1995655 - 269 170081477 rrmA ECDH10B_1960 - 23S rRNA m1G745 methyltransferase 1815 46.67 0 1995821..1996030 - 69 170081478 cspC ECDH10B_1961 - CspA family stress protein 1816 42.36 -1 1996043..1996186 - 47 170081479 yobF ECDH10B_1962 - hypothetical protein 1817 43.40 -1 1996856..1997143 - 95 170081480 yebO ECDH10B_1963 - hypothetical protein 1818 46.53 0 1997218..1997361 - 47 170081481 yobG ECDH10B_1964 - hypothetical protein 1819 43.75 -1 1997520..1997759 + 79 170081482 yobH ECDH10B_1965 - hypothetical protein 1820 49.75 0 1997903..1998694 - 263 170081483 kdgR ECDH10B_1966 - DNA-binding transcriptional regulator 1821 52.33 0 1998871..2000244 + 457 170081484 yebQ ECDH10B_1967 - transporter 1822 53.51 0 2000290..2001171 - 293 170081485 htpX ECDH10B_1968 - endopeptidase 1823 50.37 0 2001363..2003411 - 682 170081486 prc ECDH10B_1969 - carboxy-terminal protease for penicillin-binding protein 3 1824 52.93 0 2003431..2004129 - 232 170081487 proQ ECDH10B_1970 - structural transport element 1825 47.83 0 2004226..2004777 - 183 170081488 yebR ECDH10B_1971 - hypothetical protein 1826 50.08 0 2004853..2006136 + 427 170081489 yebS ECDH10B_1972 - inner membrane protein 1827 53.64 0 2006105..2008738 + 877 170081490 yebT ECDH10B_1973 - hypothetical protein 1828 51.81 0 2008818..2010257 + 479 170081491 yebU ECDH10B_1974 - methyltransferase 1829 48.52 0 2010375..2010611 + 78 170081492 yebV ECDH10B_1975 - hypothetical protein 1830 45.83 -1 2010716..2010907 + 63 170081493 yebW ECDH10B_1976 - hypothetical protein 1831 47.79 0 2010908..2011564 - 218 170081494 pphA ECDH10B_1977 - serine/threonine-specific protein phosphatase 1 1832 45.91 -1 2011960..2012301 - 113 170081495 yebY ECDH10B_1980 - hypothetical protein 1833 53.15 0 2012314..2013186 - 290 170081496 yebZ ECDH10B_1981 - inner membrane protein 1834 49.87 0 2013190..2013564 - 124 170081497 yobA ECDH10B_1982 - hypothetical protein 1835 48.48 0 2013703..2013933 + 76 170081498 holE ECDH10B_1983 - DNA polymerase III, theta subunit 1836 52.05 0 2014035..2014691 + 218 170081499 yobB ECDH10B_1984 - hypothetical protein 1837 51.89 0 2014715..2015377 + 220 170081500 exoX ECDH10B_1985 - DNA exonuclease X 1838 49.83 0 2015374..2017434 - 686 170081501 ptrB ECDH10B_1986 - protease II 1839 52.73 0 2017643..2018302 - 219 170081502 yebE ECDH10B_1987 - hypothetical protein 1840 48.78 0 2018629..2018997 - 122 170081503 yebF ECDH10B_1988 - hypothetical protein 1841 49.48 0 2019052..2019342 - 96 170081504 yebG ECDH10B_1989 - protein regulated by LexA 1842 53.77 0 2019476..2020654 + 392 170081505 purT ECDH10B_1990 - phosphoribosylglycinamide formyltransferase 2 1843 56.23 +1 2020710..2021351 - 213 170081506 eda ECDH10B_1991 - multifunctional 2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase and oxaloacetate decarboxylase 1844 53.64 0 2021388..2023199 - 603 170081507 edd ECDH10B_1992 - 6-phosphogluconate dehydratase 1845 51.69 0 2023434..2024909 - 491 170081508 zwf ECDH10B_1993 - glucose-6-phosphate dehydrogenase 1846 48.97 0 2025247..2026116 + 289 170081509 yebK ECDH10B_1994 - DNA-binding transcriptional regulator 1847 52.81 0 2026244..2027686 + 480 170081510 pykA ECDH10B_1995 - pyruvate kinase II 1848 51.54 0 2027817..2028788 - 323 170081511 lpxM ECDH10B_1996 - myristoyl-acyl carrier protein (ACP)-dependent acyltransferase 1849 52.46 0 2028908..2030230 - 440 170081512 yebA ECDH10B_1997 - peptidase 1850 49.09 0 2030246..2031178 - 310 170081513 znuA ECDH10B_1998 - zinc ABC transporter periplasmic substrate-binding protein 1851 49.21 0 2031257..2032012 + 251 170081514 znuC ECDH10B_1999 - zinc ABC transporter ATP-binding protein 1852 51.91 0 2032009..2032794 + 261 170081515 znuB ECDH10B_2000 - zinc ABC transporter membrane protein 1853 52.72 0 2032941..2033951 - 336 170081516 ruvB ECDH10B_2001 - ATP-dependent DNA helicase, component of RuvABC resolvasome 1854 53.27 0 2033960..2034571 - 203 170081517 ruvA ECDH10B_2002 - component of RuvABC resolvasome, regulatory subunit 1855 44.11 -1 2034846..2035448 + 200 170081518 yebB ECDH10B_2003 - hypothetical protein 1856 55.94 +1 2035450..2035971 - 173 170081519 ruvC ECDH10B_2004 - component of RuvABC resolvasome, endonuclease 1857 52.23 0 2036006..2036746 - 246 170081520 yebC ECDH10B_2005 - hypothetical protein 1858 52.54 0 2036775..2037227 - 150 170081521 nudB ECDH10B_2006 - dATP pyrophosphohydrolase 1859 53.75 0 2037345..2039117 - 590 170081522 aspS ECDH10B_2007 - aspartyl-tRNA synthetase 1860 53.09 0 2039427..2039993 + 188 170081523 yecD ECDH10B_2008 - hydrolase 1861 51.04 0 2039990..2040808 + 272 170081524 yecE ECDH10B_2009 - hypothetical protein 1862 50.76 0 2040861..2041256 + 131 170081525 yecN ECDH10B_2010 - inner membrane protein 1863 50.67 0 2041297..2042040 + 247 170081526 yecO ECDH10B_2011 - methyltransferase 1864 52.06 0 2042037..2043008 + 323 170081527 yecP ECDH10B_2012 - S-adenosyl-L-methionine-dependent methyltransferase 1865 51.32 0 2043173..2045602 - 809 170081528 torZ ECDH10B_2013 - trimethylamine N-oxide reductase system III, catalytic subunit 1866 47.41 0 2045627..2046727 - 366 170081529 torY ECDH10B_2014 - TMAO reductase III (TorYZ), cytochrome c-type subunit 1867 51.94 0 2047115..2047861 - 248 170081530 cutC ECDH10B_2015 - copper homeostasis protein 1868 50.79 0 2047875..2048441 - 188 170081531 yecM ECDH10B_2016 - metal-binding protein 1869 53.29 0 2048657..2050390 + 577 170081532 argS ECDH10B_2017 - arginyl-tRNA synthetase 1870 38.85 -2 2050567..2051055 + 162 170081533 yecT ECDH10B_2018 - hypothetical protein 1871 52.67 0 2051175..2051567 - 130 170081534 flhE ECDH10B_2019 - hypothetical protein 1872 54.88 0 2051567..2053645 - 692 170081535 flhA ECDH10B_2020 - flagellar export pore protein 1873 54.92 0 2053638..2054786 - 382 170081536 flhB ECDH10B_2021 - flagellar export pore protein 1874 53.49 0 2054988..2055632 - 214 170081537 cheZ ECDH10B_2022 - chemotaxis regulator, protein phosphatase for CheY 1875 49.23 0 2055643..2056032 - 129 170081538 cheY ECDH10B_2023 - chemotaxis regulator transmitting signal to flagellar motor component 1876 54.29 0 2056047..2057096 - 349 170081539 cheB ECDH10B_2024 - fused chemotaxis regulator and protein-glutamate methylesterase in two-component regulatory system with CheA 1877 54.24 0 2057099..2057959 - 286 170081540 cheR ECDH10B_2025 - chemotaxis regulator, protein-glutamate methyltransferase 1878 53.56 0 2057978..2059579 - 533 170081541 tap ECDH10B_2026 - methyl-accepting protein IV 1879 52.77 0 2059625..2061286 - 553 170081542 tar ECDH10B_2027 - methyl-accepting chemotaxis protein II 1880 51.98 0 2061431..2061934 - 167 170081543 cheW ECDH10B_2028 - purine-binding chemotaxis protein 1881 53.18 0 2063924..2064850 - 308 170081544 motB ECDH10B_2030 - hypothetical protein 1882 51.35 0 2064847..2065734 - 295 170081545 motA ECDH10B_2031 - proton conductor component of flagella motor 1883 46.39 0 2066456..2066815 - 119 170081546 flhD ECDH10B_2033 - DNA-binding transcriptional dual regulator with FlhC 1884 44.99 -1 2068785..2069213 + 142 170081547 yecG ECDH10B_2036 - universal stress protein 1885 49.19 0 2069220..2070644 - 474 170081548 otsA ECDH10B_2037 - trehalose-6-phosphate synthase 1886 50.56 0 2070619..2071419 - 266 170081549 otsB ECDH10B_2038 - trehalose-6-phosphate phosphatase, biosynthetic 1887 51.11 0 2071586..2072575 - 329 170081550 araH ECDH10B_2039 - subunit of L-arabinose ABC transporter containing membrane components 1888 52.28 0 2072587..2074101 - 504 170081551 araG ECDH10B_2040 - subunit of L-arabinose ABC transporter containing ATP-binding components 1889 51.82 0 2074171..2075160 - 329 170081552 araF ECDH10B_2041 - periplasmic-binding component of L-arabinose ABC transporter (precursor) 1890 47.82 0 2075957..2076460 + 167 170081553 yecI ECDH10B_2042 - ferritin-like protein 1891 48.41 0 2076539..2076790 - 83 170081554 yecJ ECDH10B_2043 - hypothetical protein 1892 50.31 0 2077254..2077577 + 107 170081555 yecR ECDH10B_2045 - hypothetical protein 1893 42.77 -1 2077748..2078245 + 165 170081556 ftn ECDH10B_2046 - ferritin iron storage protein (cytoplasmic) 1894 47.08 0 2078283..2078522 - 79 170081557 yecH ECDH10B_2047 - hypothetical protein 1895 51.24 0 2078713..2079924 + 403 170081558 tyrP ECDH10B_2048 - tyrosine transporter 1896 53.00 0 2079986..2080651 - 221 170081559 yecA ECDH10B_2049 - metal-binding protein 1897 52.46 0 2081301..2081849 - 182 170081560 pgsA ECDH10B_2053 - phosphatidylglycerophosphate synthetase 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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