version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1730 49.86 0 1908050..1908400 - 116 170081393 chbA ECDH10B_1874 - N,N'-diacetylchitobiose-specific enzyme IIA component of PTS 1731 49.23 0 1908451..1909809 - 452 170081394 chbC ECDH10B_1875 - N,N'-diacetylchitobiose-specific enzyme IIC component of PTS 1732 43.93 -1 1909894..1910214 - 106 170081395 chbB ECDH10B_1876 - N,N'-diacetylchitobiose-specific enzyme IIB component of PTS 1733 49.56 0 1910513..1910851 - 112 170081396 osmE ECDH10B_1877 - DNA-binding transcriptional activator 1734 49.52 0 1911053..1911880 + 275 170081397 nadE ECDH10B_1878 - NAD synthetase, NH3/glutamine-dependent 1735 51.58 0 1912110..1912997 + 295 170081398 cho ECDH10B_1879 - endonuclease of nucleotide excision repair 1736 51.91 0 1912957..1913532 - 191 170081399 ydjR ECDH10B_1880 - hypothetical protein 1737 50.82 0 1913735..1914220 - 161 170081400 spy ECDH10B_1881 - envelope stress induced periplasmic protein 1738 53.35 0 1914550..1915518 - 322 170081401 astE ECDH10B_1882 - succinylglutamate desuccinylase 1739 55.58 0 1915511..1916854 - 447 170081402 astB ECDH10B_1883 - succinylarginine dihydrolase 1740 58.08 +1 1916851..1918329 - 492 170081403 astD ECDH10B_1884 - succinylglutamic semialdehyde dehydrogenase 1741 56.04 +1 1918326..1919360 - 344 170081404 astA ECDH10B_1885 - arginine succinyltransferase 1742 55.04 0 1919357..1920577 - 406 170081405 astC ECDH10B_1886 - succinylornithine transaminase, PLP-dependent 1743 53.41 0 1921023..1921829 + 268 170081406 xthA ECDH10B_1887 - exonuclease III 1744 48.10 0 1921996..1922706 + 236 170081407 ydjX ECDH10B_1888 - inner membrane protein 1745 48.38 0 1922711..1923388 + 225 170081408 ydjY ECDH10B_1889 - hypothetical protein 1746 51.55 0 1923403..1924110 + 235 170081409 ydjZ ECDH10B_1890 - inner membrane protein 1747 56.28 +1 1924110..1924658 + 182 170081410 ynjA ECDH10B_1891 - hypothetical protein 1748 56.38 +1 1924668..1925834 + 388 170081411 ynjB ECDH10B_1892 - hypothetical protein 1749 57.01 +1 1925852..1927342 + 496 170081412 ynjC ECDH10B_1893 - ABC transporter membrane protein 1750 51.07 0 1927342..1927995 + 217 170081413 ynjD ECDH10B_1894 - ABC transporter ATP-binding protein 1751 53.52 0 1928062..1929369 + 435 170081414 ynjE ECDH10B_1895 - thiosulfate sulfur transferase 1752 53.46 0 1929378..1929998 - 206 170081415 ynjF ECDH10B_1896 - phosphatidyl transferase, inner membrane protein 1753 54.90 0 1930085..1930492 + 135 170081416 nudG ECDH10B_1897 - pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase 1754 50.55 0 1930458..1930730 - 90 170081417 ynjH ECDH10B_1898 - hypothetical protein 1755 53.27 0 1930966..1932309 + 447 170081418 gdhA ECDH10B_1899 - glutamate dehydrogenase, NADP-specific 1756 41.31 -2 1932426..1933466 - 346 170081419 ynjI ECDH10B_1900 - inner membrane protein 1757 55.15 0 1933594..1935555 - 653 170081420 topB ECDH10B_1901 - DNA topoisomerase III 1758 54.98 0 1935560..1936603 - 347 170081421 selD ECDH10B_1902 - selenophosphate synthase 1759 55.98 +1 1936720..1937271 - 183 170081422 ydjA ECDH10B_1903 - oxidoreductase 1760 51.75 0 1937432..1939288 + 618 170081423 sppA ECDH10B_1904 - protease IV (signal peptide peptidase) 1761 51.13 0 1939455..1940471 + 338 170081424 ansA ECDH10B_1905 - cytoplasmic L-asparaginase I 1762 53.12 0 1940482..1941123 + 213 170081425 pncA ECDH10B_1906 - nicotinamidase/pyrazinamidase 1763 45.11 -1 1941216..1942574 - 452 170081426 ydjE ECDH10B_1907 - transporter 1764 42.29 -1 1942691..1943449 - 252 170081427 ydjF ECDH10B_1908 - DNA-binding transcriptional regulator 1765 47.81 0 1943586..1944566 - 326 170081428 ydjG ECDH10B_1909 - oxidoreductase 1766 45.36 -1 1944576..1945523 - 315 170081429 ydjH ECDH10B_1910 - kinase 1767 46.74 0 1946385..1947428 - 347 170081430 ydjJ ECDH10B_1912 - oxidoreductase, Zn-dependent and NAD(P)-binding 1768 49.20 0 1947445..1948824 - 459 170081431 ydjK ECDH10B_1913 - transporter 1769 49.77 0 1948851..1949927 - 358 170081432 ydjL ECDH10B_1914 - oxidoreductase, Zn-dependent and NAD(P)-binding 1770 45.05 -1 1950297..1950569 - 90 170081433 yeaC ECDH10B_1915 - hypothetical protein 1771 48.55 0 1950611..1951024 - 137 170081434 msrB ECDH10B_1916 - methionine sulfoxide reductase B 1772 50.00 0 1951366..1952361 + 331 170081435 gapA ECDH10B_1917 - glyceraldehyde-3-phosphate dehydrogenase A 1773 49.83 0 1952445..1953329 + 294 170081436 yeaD ECDH10B_1918 - hypothetical protein 1774 50.53 0 1953377..1954231 - 284 170081437 yeaE ECDH10B_1919 - oxidoreductase 1775 52.21 0 1954321..1955067 - 248 170081438 mipA ECDH10B_1920 - scaffolding protein for murein synthesizing machinery 1776 50.13 0 1955503..1957437 + 644 170081439 yeaG ECDH10B_1921 - hypothetical protein 1777 49.14 0 1957550..1958833 + 427 170081440 yeaH ECDH10B_1922 - hypothetical protein 1778 38.48 -2 1958980..1960455 + 491 170081441 yeaI ECDH10B_1923 - diguanylate cyclase 1779 46.01 -1 1960636..1962126 + 496 170081442 yeaJ ECDH10B_1924 - diguanylate cyclase 1780 51.39 0 1962169..1962672 + 167 170081443 yeaK ECDH10B_1925 - hypothetical protein 1781 42.86 -1 1962673..1962777 - 34 170081444 yoaI ECDH10B_1926 - hypothetical protein 1782 54.81 0 1962947..1963393 + 148 170081445 yeaL ECDH10B_1927 - inner membrane protein 1783 49.88 0 1963350..1964171 - 273 170081446 yeaM ECDH10B_1928 - DNA-binding transcriptional regulator 1784 52.71 0 1964268..1965449 + 393 170081447 yeaN ECDH10B_1929 - transporter 1785 52.59 0 1965504..1965851 + 115 170081448 yeaO ECDH10B_1930 - hypothetical protein 1786 52.55 0 1965873..1966127 - 84 170081449 yoaF ECDH10B_1931 - outer membrane protein 1787 48.05 0 1966310..1967335 + 341 170081450 yeaP ECDH10B_1932 - diguanylate cyclase 1788 46.18 -1 1967602..1967850 - 82 170081451 yeaQ ECDH10B_1933 - inner membrane protein 1789 45.90 -1 1967998..1968180 - 60 170081452 yoaG ECDH10B_1934 - hypothetical protein 1790 48.33 0 1968184..1968543 - 119 170081453 yeaR ECDH10B_1935 - hypothetical protein 1791 45.23 -1 1968716..1969354 - 212 170081454 yeaS ECDH10B_1936 - neutral amino-acid efflux system 1792 52.38 0 1969481..1970404 - 307 170081455 yeaT ECDH10B_1937 - DNA-binding transcriptional regulator 1793 53.68 0 1970507..1971592 + 361 170081456 yeaU ECDH10B_1938 - dehydrogenase 1794 51.24 0 1971783..1973228 + 481 170081457 yeaV ECDH10B_1939 - transporter 1795 51.73 0 1973260..1974384 + 374 170081458 yeaW ECDH10B_1940 - 2Fe-2S cluster-containing protein 1796 50.10 0 1974440..1975405 + 321 170081459 yeaX ECDH10B_1941 - oxidoreductase 1797 54.08 0 1975459..1976586 - 375 170081460 rnd ECDH10B_1942 - ribonuclease D 1798 51.19 0 1976656..1978341 - 561 170081461 fadD ECDH10B_1943 - acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) 1799 53.61 0 1978546..1979127 - 193 170081462 yeaY ECDH10B_1944 - lipoprotein 1800 55.60 0 1979167..1979862 - 231 170081463 yeaZ ECDH10B_1945 - peptidase 1801 55.21 0 1979920..1981830 - 636 170081464 yoaA ECDH10B_1946 - hypothetical protein 1802 51.59 0 1981962..1982306 + 114 170081465 yoaB ECDH10B_1947 - hypothetical protein 1803 41.67 -1 1982668..1983027 + 119 170081466 yoaC ECDH10B_1948 - hypothetical protein 1804 56.11 +1 1983147..1983326 - 59 170081467 yoaH ECDH10B_1949 - hypothetical protein 1805 54.92 0 1984765..1985343 + 192 170081468 yeaB ECDH10B_1951 - NUDIX hydrolase 1806 53.99 0 1985527..1986891 + 454 170081469 sdaA ECDH10B_1952 - L-serine deaminase I 1807 50.53 0 1987022..1988620 + 532 170081470 yoaD ECDH10B_1953 - phosphodiesterase 1808 53.89 0 1988624..1990180 - 518 170081471 yoaE ECDH10B_1954 - fused membrane protein; protein 1809 50.31 0 1990643..1991614 + 323 170081472 manX ECDH10B_1955 - fused mannose-specific PTS enzymes: IIA component; IIB component 1810 51.56 0 1991677..1992477 + 266 170081473 manY ECDH10B_1956 - mannose-specific enzyme IIC component of PTS 1811 52.73 0 1992481..1993341 + 286 170081474 manZ ECDH10B_1957 - mannose-specific enzyme IID component of PTS 1812 45.10 -1 1993396..1993854 + 152 170081475 yobD ECDH10B_1958 - inner membrane protein 1813 51.68 0 1994283..1994849 + 188 170081476 yebN ECDH10B_1959 - inner membrane protein 1814 51.36 0 1994846..1995655 - 269 170081477 rrmA ECDH10B_1960 - 23S rRNA m1G745 methyltransferase 1815 46.67 0 1995821..1996030 - 69 170081478 cspC ECDH10B_1961 - CspA family stress protein 1816 42.36 -1 1996043..1996186 - 47 170081479 yobF ECDH10B_1962 - hypothetical protein 1817 43.40 -1 1996856..1997143 - 95 170081480 yebO ECDH10B_1963 - hypothetical protein 1818 46.53 0 1997218..1997361 - 47 170081481 yobG ECDH10B_1964 - hypothetical protein 1819 43.75 -1 1997520..1997759 + 79 170081482 yobH ECDH10B_1965 - hypothetical protein 1820 49.75 0 1997903..1998694 - 263 170081483 kdgR ECDH10B_1966 - DNA-binding transcriptional regulator 1821 52.33 0 1998871..2000244 + 457 170081484 yebQ ECDH10B_1967 - transporter 1822 53.51 0 2000290..2001171 - 293 170081485 htpX ECDH10B_1968 - endopeptidase 1823 50.37 0 2001363..2003411 - 682 170081486 prc ECDH10B_1969 - carboxy-terminal protease for penicillin-binding protein 3 1824 52.93 0 2003431..2004129 - 232 170081487 proQ ECDH10B_1970 - structural transport element 1825 47.83 0 2004226..2004777 - 183 170081488 yebR ECDH10B_1971 - hypothetical protein 1826 50.08 0 2004853..2006136 + 427 170081489 yebS ECDH10B_1972 - inner membrane protein 1827 53.64 0 2006105..2008738 + 877 170081490 yebT ECDH10B_1973 - hypothetical protein 1828 51.81 0 2008818..2010257 + 479 170081491 yebU ECDH10B_1974 - methyltransferase 1829 48.52 0 2010375..2010611 + 78 170081492 yebV ECDH10B_1975 - hypothetical protein 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0