version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1237 56.70 +1 1365173..1365814 + 213 170080900 rap ECDH10B_1336 - structure-specific endonuclease 1238 51.23 0 1366130..1366939 + 269 170080901 17 ECDH10B_1337 - prophage antitermination protein 1239 52.00 0 1367418..1367642 + 74 170080902 18 ECDH10B_1338 - lysis S family protein 1240 56.77 +1 1367620..1368114 + 164 170080903 19 ECDH10B_1339 - lysozyme-like protein 1241 53.38 0 1368111..1368569 + 152 170080904 Rz ECDH10B_1340 - Rz lysis protein 1242 52.69 0 1368331..1368516 + 61 170080905 Rz1 ECDH10B_1341 - putative lysis protein 1243 49.55 0 1368732..1369286 + 184 170080906 rha ECDH10B_1342 - Rha protein 1244 40.33 -2 1369358..1369972 - 204 170080907 - ECDH10B_1343 - hypothetical protein 1245 39.83 -2 1369953..1370183 + 76 170080908 - ECDH10B_1344 - putative Fur-regulated protein 1246 50.07 0 1370345..1371073 + 242 170080909 - ECDH10B_1345 - putative Fur-regulated protein 1247 51.10 0 1371321..1371866 + 181 170080910 1 ECDH10B_1346 - phage DNA packaging protein Nu1 1248 52.42 0 1371841..1373763 + 640 170080911 2 ECDH10B_1347 - DNA packaging protein 1249 51.69 0 1373763..1373969 + 68 170080912 W ECDH10B_1348 - head-to-tail joining protein 1250 54.93 0 1373966..1375558 + 530 170080913 B ECDH10B_1349 - head portal protein 1251 56.03 +1 1375539..1376882 + 447 170080914 C ECDH10B_1350 - head protein 1252 55.26 0 1376892..1377224 + 110 170080915 D ECDH10B_1351 - head decoration protein; major capsid protein 1253 50.53 0 1378249..1378719 + 156 170080916 cynS ECDH10B_1353 - cyanate aminohydrolase 1254 58.70 +1 1378752..1379906 + 384 170080917 cynX ECDH10B_1354 - cyanate transporter 1255 42.81 -1 1380009..1380620 - 203 170080918 lacA ECDH10B_1355 - thiogalactoside acetyltransferase 1256 46.33 -1 1380686..1381939 - 417 170080919 lacY ECDH10B_1356 - lactose/galactose transporter 1257 56.33 +1 1385095..1386177 - 360 170080920 lacI ECDH10B_1357 - DNA-binding transcriptional repressor 1258 53.69 0 1386254..1387201 - 315 170080921 mhpR ECDH10B_1358 - DNA-binding transcriptional activator, 3HPP-binding 1259 57.00 +1 1387278..1388942 + 554 170080922 mhpA ECDH10B_1359 - 3-(3-hydroxyphenyl)propionate hydroxylase 1260 57.78 +1 1388944..1389888 + 314 170080923 mhpB ECDH10B_1360 - 2,3-dihydroxyphenylpropionate 1,2-dioxygenase 1261 54.54 0 1389891..1390772 + 293 170080924 mhpC ECDH10B_1361 - 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase 1262 34.33 -2 1391119..1393215 - 698 170080925 tnpX ECDH10B_1362 - hypothetical protein 1263 44.57 -1 1393231..1393782 - 183 170080926 tnpR ECDH10B_1363 - resolvase 1264 48.45 0 1393946..1396954 + 1002 170080927 tnpA ECDH10B_1364 - transposase 1265 49.16 0 1397989..1398285 - 98 170080928 yciI ECDH10B_1366 - hypothetical protein 1266 54.44 0 1398509..1399228 + 239 170080929 tonB ECDH10B_1367 - membrane spanning protein in TonB-ExbB-ExbD complex 1267 48.37 0 1399268..1399666 - 132 170080930 yciA ECDH10B_1368 - hydrolase 1268 46.48 0 1399771..1400310 - 179 170080931 yciB ECDH10B_1369 - inner membrane protein 1269 49.33 0 1400340..1401083 - 247 170080932 yciC ECDH10B_1370 - inner membrane protein 1270 50.08 0 1401440..1402078 + 212 170080933 ompW ECDH10B_1371 - outer membrane protein W 1271 40.63 -2 1402138..1402644 - 168 170080934 yciE ECDH10B_1372 - hypothetical protein 1272 43.11 -1 1402690..1403190 - 166 170080935 yciF ECDH10B_1373 - hypothetical protein 1273 51.11 0 1403276..1403455 - 59 170080936 yciG ECDH10B_1374 - hypothetical protein 1274 53.53 0 1403836..1404642 - 268 170080937 trpA ECDH10B_1375 - tryptophan synthase, alpha subunit 1275 54.69 0 1404642..1405835 - 397 170080938 trpB ECDH10B_1376 - tryptophan synthase, beta subunit 1276 52.83 0 1405847..1407205 - 452 170080939 trpC ECDH10B_1377 - fused indole-3-glycerolphosphate synthetase; N-(5-phosphoribosyl)anthranilate isomerase 1277 56.39 +1 1407209..1408804 - 531 170080940 trpD ECDH10B_1378 - fused glutamine amidotransferase (component II) of anthranilate synthase; anthranilate phosphoribosyl transferase 1278 54.38 0 1408804..1410366 - 520 170080941 trpE ECDH10B_1379 - component I of anthranilate synthase 1279 44.44 -1 1410458..1410502 - 14 170080942 trpL ECDH10B_1380 - trp operon leader peptide 1280 54.08 0 1410640..1411521 + 293 170080943 trpH ECDH10B_1381 - hypothetical protein 1281 48.15 0 1411518..1412138 + 206 170080944 yciO ECDH10B_1382 - hypothetical protein 1282 46.99 0 1412166..1414061 + 631 170080945 yciQ ECDH10B_1383 - inner membrane protein 1283 53.77 0 1414272..1415147 + 291 170080946 rluB ECDH10B_1384 - 23S rRNA pseudouridylate synthase 1284 50.25 0 1415187..1415777 - 196 170080947 btuR ECDH10B_1385 - cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase 1285 52.44 0 1415774..1416532 - 252 170080948 yciK ECDH10B_1386 - oxoacyl-(acyl carrier protein) reductase, EmrKY-TolC system 1286 50.57 0 1416752..1417801 + 349 170080949 sohB ECDH10B_1387 - inner membrane peptidase 1287 47.22 0 1417837..1418088 - 83 170080950 yciN ECDH10B_1388 - hypothetical protein 1288 51.73 0 1418468..1421065 + 865 170080951 topA ECDH10B_1389 - DNA topoisomerase I, omega subunit 1289 48.31 0 1421275..1422249 + 324 170080952 cysB ECDH10B_1390 - DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding 1290 49.61 0 1422580..1422708 + 42 170080953 ymiA ECDH10B_1391 - hypothetical protein 1291 45.83 -1 1422711..1422878 + 55 170080954 yciX ECDH10B_1392 - hypothetical protein 1292 52.95 0 1423251..1425926 + 891 170080955 acnA ECDH10B_1393 - aconitate hydratase 1 1293 50.08 0 1425990..1426580 - 196 170080956 ribA ECDH10B_1394 - GTP cyclohydrolase II 1294 50.59 0 1426750..1427514 + 254 170080957 pgpB ECDH10B_1395 - phosphatidylglycerophosphatase B 1295 50.16 0 1427663..1427971 + 102 170080958 yciS ECDH10B_1396 - inner membrane protein 1296 51.88 0 1427978..1429147 + 389 170080959 yciM ECDH10B_1397 - hypothetical protein 1297 52.98 0 1429341..1430078 + 245 170080960 pyrF ECDH10B_1398 - orotidine-5'-phosphate decarboxylase 1298 49.85 0 1430078..1430404 + 108 170080961 yciH ECDH10B_1399 - hypothetical protein 1299 52.05 0 1430530..1430748 - 72 170080962 osmB ECDH10B_1400 - lipoprotein 1300 48.80 0 1431017..1431766 - 249 170080963 yciT ECDH10B_1401 - DNA-binding transcriptional regulator 1301 48.49 0 1432177..1434162 - 661 170080964 gmr ECDH10B_1402 - modulator of RNase II stability 1302 53.23 0 1434398..1436332 - 644 170080965 rnb ECDH10B_1403 - ribonuclease II 1303 50.80 0 1436400..1437527 - 375 170080966 yciW ECDH10B_1404 - oxidoreductase 1304 53.23 0 1437671..1438459 - 262 170080967 fabI ECDH10B_1405 - enoyl-[acyl-carrier-protein] reductase, NADH-dependent 1305 49.72 0 1438827..1439180 - 117 170080968 ycjD ECDH10B_1406 - hypothetical protein 1306 51.18 0 1439248..1440054 - 268 170080969 sapF ECDH10B_1407 - antibiotic ABC transporter ATP-binding protein 1307 51.36 0 1440056..1441048 - 330 170080970 sapD ECDH10B_1408 - antibiotic ABC transporter ATP-binding protein 1308 56.90 +1 1441048..1441938 - 296 170080971 sapC ECDH10B_1409 - antibiotic ABC transporter transmembrane protein 1309 51.45 0 1441925..1442890 - 321 170080972 sapB ECDH10B_1410 - antibiotic ABC transporter transmembrane protein 1310 54.26 0 1442887..1444530 - 547 170080973 sapA ECDH10B_1411 - antibiotic ABC transporter periplasmic-binding protein 1311 48.37 0 1444843..1445088 - 81 170080974 ymjA ECDH10B_1412 - hypothetical protein 1312 53.39 0 1445222..1446607 - 461 170080975 puuP ECDH10B_1413 - putrescine importer 1313 53.49 0 1446910..1448328 - 472 170080976 puuA ECDH10B_1414 - gamma-Glu-putrescine synthase 1314 52.29 0 1448540..1449304 + 254 170080977 puuD ECDH10B_1415 - gamma-Glu-GABA hydrolase 1315 50.90 0 1449331..1449888 + 185 170080978 puuR ECDH10B_1416 - DNA-binding transcriptional repressor 1316 57.33 +1 1450163..1451650 + 495 170080979 puuC ECDH10B_1417 - gamma-Glu-gamma-aminobutyraldehyde dehydrogenase, NAD(P)H-dependent 1317 58.24 +1 1451652..1452932 + 426 170080980 puuB ECDH10B_1418 - gamma-Glu-putrescine oxidase, FAD/NAD(P)-binding 1318 57.66 +1 1452970..1454235 + 421 170080981 puuE ECDH10B_1419 - GABA aminotransferase, PLP-dependent 1319 51.74 0 1454355..1455332 - 325 170080982 pspF ECDH10B_1420 - DNA-binding transcriptional activator 1320 49.33 0 1455499..1456167 + 222 170080983 pspA ECDH10B_1421 - regulatory protein for phage-shock-protein operon 1321 47.56 0 1456221..1456445 + 74 170080984 pspB ECDH10B_1422 - DNA-binding transcriptional regulator of psp operon 1322 50.28 0 1456445..1456804 + 119 170080985 pspC ECDH10B_1423 - DNA-binding transcriptional activator 1323 54.50 0 1456813..1457034 + 73 170080986 pspD ECDH10B_1424 - peripheral inner membrane phage-shock protein 1324 50.79 0 1457109..1457423 + 104 170080987 pspE ECDH10B_1425 - thiosulfate:cyanide sulfurtransferase (rhodanese) 1325 43.87 -1 1457636..1459315 + 559 170080988 ycjM ECDH10B_1426 - glucosyltransferase 1326 50.04 0 1459329..1460621 + 430 170080989 ycjN ECDH10B_1427 - sugar ABC transporter periplasmic-binding protein 1327 53.63 0 1460642..1461523 + 293 170080990 ycjO ECDH10B_1428 - sugar ABC transporter membrane protein 1328 52.79 0 1461510..1462352 + 280 170080991 ycjP ECDH10B_1429 - sugar ABC transporter membrane protein 1329 55.75 0 1462383..1463435 + 350 170080992 ycjQ ECDH10B_1430 - oxidoreductase, Zn-dependent and NAD(P)-binding 1330 53.61 0 1463454..1464242 + 262 170080993 ycjR ECDH10B_1431 - hypothetical protein 1331 54.73 0 1464252..1465307 + 351 170080994 ycjS ECDH10B_1432 - oxidoreductase, NADH-binding 1332 53.75 0 1465304..1467571 + 755 170080995 ycjT ECDH10B_1433 - hydrolase 1333 56.52 +1 1467568..1468227 + 219 170080996 ycjU ECDH10B_1434 - beta-phosphoglucomutase 1334 49.89 0 1469367..1470272 + 301 170080997 ompG ECDH10B_1438 - outer membrane porin 1335 45.45 -1 1470383..1471381 - 332 170080998 ycjW ECDH10B_1439 - DNA-binding transcriptional regulator 1336 54.43 0 1471537..1472934 + 465 170080999 ycjX ECDH10B_1440 - hypothetical protein 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0