version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1206 47.84 0 1338062..1338709 + 215 170080869 ychE ECDH10B_1303 - inner membrane protein 1207 47.73 0 1340224..1341855 + 543 170080870 oppA ECDH10B_1305 - oligopeptide transporter periplasmic subunit 1208 45.71 -1 1341941..1342861 + 306 170080871 oppB ECDH10B_1306 - oligopeptide ABC transporter membrane protein 1209 52.37 0 1342876..1343784 + 302 170080872 oppC ECDH10B_1307 - oligopeptide ABC transporter membrane protein 1210 51.78 0 1343796..1344809 + 337 170080873 oppD ECDH10B_1308 - oligopeptide ABC transporter ATP-binding protein 1211 51.64 0 1344806..1345810 + 334 170080874 oppF ECDH10B_1309 - ATP-binding subunit of oligopeptide ABC transporter 1212 47.27 0 1345863..1346192 - 109 170080875 yciU ECDH10B_1310 - hypothetical protein 1213 51.68 0 1346227..1347687 - 486 170080876 cls ECDH10B_1311 - cardiolipin synthase 1 1214 42.34 -1 1348058..1349311 - 417 170080877 kch ECDH10B_1312 - voltage-gated potassium channel 1215 47.40 0 1349759..1351009 + 416 170080878 int ECDH10B_1313 - integrase 1216 49.49 0 1351006..1351203 - 65 170080879 xis ECDH10B_1314 - excisionase 1217 55.69 0 1351245..1351490 - 81 170080880 - ECDH10B_1315 - hypothetical protein 1218 59.31 +1 1352518..1352952 - 144 170080881 - ECDH10B_1317 - hypothetical protein 1219 55.36 0 1352943..1353623 - 226 170080882 exo ECDH10B_1318 - exonuclease 1220 51.74 0 1353620..1354537 - 305 170080883 bet ECDH10B_1319 - RecT protein 1221 51.06 0 1354547..1354828 - 93 170080884 - ECDH10B_1320 - hypothetical protein 1222 58.51 +1 1354836..1355804 - 322 170080885 - ECDH10B_1321 - hypothetical protein 1223 43.21 -1 1355909..1356799 - 296 170080886 - ECDH10B_1322 - hypothetical protein 1224 57.14 +1 1356756..1356965 - 69 170080887 kil ECDH10B_1323 - prophage Kil protein 1225 53.23 0 1356962..1357162 - 66 170080888 - ECDH10B_1324 - hypothetical protein 1226 45.71 -1 1357122..1357331 - 69 170080889 - ECDH10B_1325 - hypothetical protein 1227 49.83 0 1357487..1357783 - 98 170080890 N ECDH10B_1326 - regulatory protein N 1228 42.10 -1 1358581..1359447 - 288 170080891 40 ECDH10B_1327 - protein 40A 1229 46.84 0 1359584..1360294 - 236 170080892 cI ECDH10B_1328 - repressor protein CI 1230 47.75 0 1360412..1360633 + 73 170080893 30 ECDH10B_1329 - regulatory protein 30 (Cro) 1231 54.64 0 1360808..1361206 + 132 170080894 cII ECDH10B_1330 - regulatory protein CII 1232 50.94 0 1361292..1362200 + 302 170080895 15 ECDH10B_1331 - replication protein 15 (O) 1233 62.46 +2 1362197..1362886 + 229 170080896 14 ECDH10B_1332 - replication protein 14 (P) 1234 56.25 +1 1362950..1363669 + 239 170080897 - ECDH10B_1333 - hypothetical protein 1235 50.40 0 1363842..1364345 + 167 170080898 - ECDH10B_1334 - hypothetical protein 1236 52.91 0 1364512..1365180 + 222 170080899 - ECDH10B_1335 - serine/threonine-protein phosphatase 1237 56.70 +1 1365173..1365814 + 213 170080900 rap ECDH10B_1336 - structure-specific endonuclease 1238 51.23 0 1366130..1366939 + 269 170080901 17 ECDH10B_1337 - prophage antitermination protein 1239 52.00 0 1367418..1367642 + 74 170080902 18 ECDH10B_1338 - lysis S family protein 1240 56.77 +1 1367620..1368114 + 164 170080903 19 ECDH10B_1339 - lysozyme-like protein 1241 53.38 0 1368111..1368569 + 152 170080904 Rz ECDH10B_1340 - Rz lysis protein 1242 52.69 0 1368331..1368516 + 61 170080905 Rz1 ECDH10B_1341 - putative lysis protein 1243 49.55 0 1368732..1369286 + 184 170080906 rha ECDH10B_1342 - Rha protein 1244 40.33 -2 1369358..1369972 - 204 170080907 - ECDH10B_1343 - hypothetical protein 1245 39.83 -2 1369953..1370183 + 76 170080908 - ECDH10B_1344 - putative Fur-regulated protein 1246 50.07 0 1370345..1371073 + 242 170080909 - ECDH10B_1345 - putative Fur-regulated protein 1247 51.10 0 1371321..1371866 + 181 170080910 1 ECDH10B_1346 - phage DNA packaging protein Nu1 1248 52.42 0 1371841..1373763 + 640 170080911 2 ECDH10B_1347 - DNA packaging protein 1249 51.69 0 1373763..1373969 + 68 170080912 W ECDH10B_1348 - head-to-tail joining protein 1250 54.93 0 1373966..1375558 + 530 170080913 B ECDH10B_1349 - head portal protein 1251 56.03 +1 1375539..1376882 + 447 170080914 C ECDH10B_1350 - head protein 1252 55.26 0 1376892..1377224 + 110 170080915 D ECDH10B_1351 - head decoration protein; major capsid protein 1253 50.53 0 1378249..1378719 + 156 170080916 cynS ECDH10B_1353 - cyanate aminohydrolase 1254 58.70 +1 1378752..1379906 + 384 170080917 cynX ECDH10B_1354 - cyanate transporter 1255 42.81 -1 1380009..1380620 - 203 170080918 lacA ECDH10B_1355 - thiogalactoside acetyltransferase 1256 46.33 -1 1380686..1381939 - 417 170080919 lacY ECDH10B_1356 - lactose/galactose transporter 1257 56.33 +1 1385095..1386177 - 360 170080920 lacI ECDH10B_1357 - DNA-binding transcriptional repressor 1258 53.69 0 1386254..1387201 - 315 170080921 mhpR ECDH10B_1358 - DNA-binding transcriptional activator, 3HPP-binding 1259 57.00 +1 1387278..1388942 + 554 170080922 mhpA ECDH10B_1359 - 3-(3-hydroxyphenyl)propionate hydroxylase 1260 57.78 +1 1388944..1389888 + 314 170080923 mhpB ECDH10B_1360 - 2,3-dihydroxyphenylpropionate 1,2-dioxygenase 1261 54.54 0 1389891..1390772 + 293 170080924 mhpC ECDH10B_1361 - 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase 1262 34.33 -2 1391119..1393215 - 698 170080925 tnpX ECDH10B_1362 - hypothetical protein 1263 44.57 -1 1393231..1393782 - 183 170080926 tnpR ECDH10B_1363 - resolvase 1264 48.45 0 1393946..1396954 + 1002 170080927 tnpA ECDH10B_1364 - transposase 1265 49.16 0 1397989..1398285 - 98 170080928 yciI ECDH10B_1366 - hypothetical protein 1266 54.44 0 1398509..1399228 + 239 170080929 tonB ECDH10B_1367 - membrane spanning protein in TonB-ExbB-ExbD complex 1267 48.37 0 1399268..1399666 - 132 170080930 yciA ECDH10B_1368 - hydrolase 1268 46.48 0 1399771..1400310 - 179 170080931 yciB ECDH10B_1369 - inner membrane protein 1269 49.33 0 1400340..1401083 - 247 170080932 yciC ECDH10B_1370 - inner membrane protein 1270 50.08 0 1401440..1402078 + 212 170080933 ompW ECDH10B_1371 - outer membrane protein W 1271 40.63 -2 1402138..1402644 - 168 170080934 yciE ECDH10B_1372 - hypothetical protein 1272 43.11 -1 1402690..1403190 - 166 170080935 yciF ECDH10B_1373 - hypothetical protein 1273 51.11 0 1403276..1403455 - 59 170080936 yciG ECDH10B_1374 - hypothetical protein 1274 53.53 0 1403836..1404642 - 268 170080937 trpA ECDH10B_1375 - tryptophan synthase, alpha subunit 1275 54.69 0 1404642..1405835 - 397 170080938 trpB ECDH10B_1376 - tryptophan synthase, beta subunit 1276 52.83 0 1405847..1407205 - 452 170080939 trpC ECDH10B_1377 - fused indole-3-glycerolphosphate synthetase; N-(5-phosphoribosyl)anthranilate isomerase 1277 56.39 +1 1407209..1408804 - 531 170080940 trpD ECDH10B_1378 - fused glutamine amidotransferase (component II) of anthranilate synthase; anthranilate phosphoribosyl transferase 1278 54.38 0 1408804..1410366 - 520 170080941 trpE ECDH10B_1379 - component I of anthranilate synthase 1279 44.44 -1 1410458..1410502 - 14 170080942 trpL ECDH10B_1380 - trp operon leader peptide 1280 54.08 0 1410640..1411521 + 293 170080943 trpH ECDH10B_1381 - hypothetical protein 1281 48.15 0 1411518..1412138 + 206 170080944 yciO ECDH10B_1382 - hypothetical protein 1282 46.99 0 1412166..1414061 + 631 170080945 yciQ ECDH10B_1383 - inner membrane protein 1283 53.77 0 1414272..1415147 + 291 170080946 rluB ECDH10B_1384 - 23S rRNA pseudouridylate synthase 1284 50.25 0 1415187..1415777 - 196 170080947 btuR ECDH10B_1385 - cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase 1285 52.44 0 1415774..1416532 - 252 170080948 yciK ECDH10B_1386 - oxoacyl-(acyl carrier protein) reductase, EmrKY-TolC system 1286 50.57 0 1416752..1417801 + 349 170080949 sohB ECDH10B_1387 - inner membrane peptidase 1287 47.22 0 1417837..1418088 - 83 170080950 yciN ECDH10B_1388 - hypothetical protein 1288 51.73 0 1418468..1421065 + 865 170080951 topA ECDH10B_1389 - DNA topoisomerase I, omega subunit 1289 48.31 0 1421275..1422249 + 324 170080952 cysB ECDH10B_1390 - DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding 1290 49.61 0 1422580..1422708 + 42 170080953 ymiA ECDH10B_1391 - hypothetical protein 1291 45.83 -1 1422711..1422878 + 55 170080954 yciX ECDH10B_1392 - hypothetical protein 1292 52.95 0 1423251..1425926 + 891 170080955 acnA ECDH10B_1393 - aconitate hydratase 1 1293 50.08 0 1425990..1426580 - 196 170080956 ribA ECDH10B_1394 - GTP cyclohydrolase II 1294 50.59 0 1426750..1427514 + 254 170080957 pgpB ECDH10B_1395 - phosphatidylglycerophosphatase B 1295 50.16 0 1427663..1427971 + 102 170080958 yciS ECDH10B_1396 - inner membrane protein 1296 51.88 0 1427978..1429147 + 389 170080959 yciM ECDH10B_1397 - hypothetical protein 1297 52.98 0 1429341..1430078 + 245 170080960 pyrF ECDH10B_1398 - orotidine-5'-phosphate decarboxylase 1298 49.85 0 1430078..1430404 + 108 170080961 yciH ECDH10B_1399 - hypothetical protein 1299 52.05 0 1430530..1430748 - 72 170080962 osmB ECDH10B_1400 - lipoprotein 1300 48.80 0 1431017..1431766 - 249 170080963 yciT ECDH10B_1401 - DNA-binding transcriptional regulator 1301 48.49 0 1432177..1434162 - 661 170080964 gmr ECDH10B_1402 - modulator of RNase II stability 1302 53.23 0 1434398..1436332 - 644 170080965 rnb ECDH10B_1403 - ribonuclease II 1303 50.80 0 1436400..1437527 - 375 170080966 yciW ECDH10B_1404 - oxidoreductase 1304 53.23 0 1437671..1438459 - 262 170080967 fabI ECDH10B_1405 - enoyl-[acyl-carrier-protein] reductase, NADH-dependent 1305 49.72 0 1438827..1439180 - 117 170080968 ycjD ECDH10B_1406 - hypothetical protein 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0