version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 73 54.00 0 81809..82321 + 170 170079736 secM ECDH10B_0079 - regulator of secA translation 74 52.40 0 82383..85088 + 901 170079737 secA ECDH10B_0080 - preprotein translocase subunit, ATPase 75 49.23 0 85148..85537 + 129 170079738 mutT ECDH10B_0081 - nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP 76 51.52 0 85753..85950 - 65 170079739 yacG ECDH10B_0082 - zinc-binding protein 77 51.48 0 85960..86703 - 247 170079740 yacF ECDH10B_0083 - hypothetical protein 78 52.66 0 86703..87323 - 206 170079741 coaE ECDH10B_0084 - dephospho-CoA kinase 79 51.34 0 87548..88591 + 347 170079742 guaC ECDH10B_0085 - GMP reductase 80 51.95 0 88626..89828 - 400 170079743 hofC ECDH10B_0086 - assembly protein in type IV pilin biogenesis, transmembrane protein 81 53.46 0 89818..91203 - 461 170079744 hofB ECDH10B_0087 - hypothetical protein 82 53.06 0 91213..91653 - 146 170079745 ppdD ECDH10B_0088 - major pilin subunit 83 53.13 0 91856..92749 - 297 170079746 nadC ECDH10B_0089 - quinolinate phosphoribosyltransferase 84 53.80 0 92837..93388 + 183 170079747 ampD ECDH10B_0090 - N-acetyl-anhydromuranmyl-L-alanine amidase 85 52.05 0 93385..94239 + 284 170079748 ampE ECDH10B_0091 - inner membrane protein 86 52.69 0 94282..95655 - 457 170079749 aroP ECDH10B_0092 - aromatic amino acid transporter 87 55.82 0 96196..96960 + 254 170079750 pdhR ECDH10B_0093 - DNA-binding transcriptional dual regulator 88 53.04 0 97121..99784 + 887 170079751 aceE ECDH10B_0094 - pyruvate dehydrogenase, decarboxylase component E1, thiamin-binding 89 54.68 0 99799..101691 + 630 170079752 aceF ECDH10B_0095 - pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2 90 53.05 0 102016..103440 + 474 170079753 lpd ECDH10B_0096 - lipoamide dehydrogenase, E3 component IS part of three enzyme complexes 91 53.88 0 103511..105364 - 617 170079754 yacH ECDH10B_0097 - hypothetical protein 92 55.89 +1 105719..108316 + 865 170079755 acnB ECDH10B_0098 - bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase 93 52.07 0 108492..108854 + 120 170079756 yacL ECDH10B_0099 - hypothetical protein 94 46.16 -1 108892..109686 - 264 170079757 speD ECDH10B_0100 - S-adenosylmethionine decarboxylase 95 50.75 0 109702..110568 - 288 170079758 speE ECDH10B_0101 - spermidine synthase (putrescine aminopropyltransferase) 96 50.00 0 110674..111021 - 115 170079759 yacC ECDH10B_0102 - hypothetical protein 97 54.67 0 111187..112737 + 516 170079760 cueO ECDH10B_0103 - multicopper oxidase (laccase) 98 55.42 0 112939..115329 - 796 170079761 gcd ECDH10B_0104 - glucose dehydrogenase 99 50.65 0 115535..116071 + 178 170079762 hpt ECDH10B_0105 - hypoxanthine phosphoribosyltransferase 100 50.68 0 116112..116774 - 220 170079763 can ECDH10B_0106 - carbonic anhydrase 101 49.62 0 116883..117809 + 308 170079764 yadG ECDH10B_0107 - ABC transporter ATP-binding protein 102 50.71 0 117806..118576 + 256 170079765 yadH ECDH10B_0108 - ABC transporter membrane protein 103 49.21 0 118681..119121 + 146 170079766 yadI ECDH10B_0109 - PTS enzyme IIA 104 49.51 0 119185..120414 + 409 170079767 yadE ECDH10B_0110 - polysaccharide deacetylase lipoprotein 105 52.49 0 120418..120798 - 126 170079768 panD ECDH10B_0111 - aspartate 1-decarboxylase 106 48.84 0 121072..121974 + 300 170079769 yadD ECDH10B_0112 - transposase 107 52.70 0 122048..122899 - 283 170079770 panC ECDH10B_0113 - pantothenate synthetase 108 54.59 0 122911..123705 - 264 170079771 panB ECDH10B_0114 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 109 40.36 -2 123819..125057 - 412 170079772 yadC ECDH10B_0115 - fimbrial-like adhesin protein 110 41.37 -2 125107..125703 - 198 170079773 yadK ECDH10B_0116 - fimbrial-like adhesin protein 111 42.57 -1 125730..126335 - 201 170079774 yadL ECDH10B_0117 - fimbrial-like adhesin protein 112 42.81 -1 126347..126916 - 189 170079775 yadM ECDH10B_0118 - fimbrial-like adhesin protein 113 43.34 -1 126933..129530 - 865 170079776 htrE ECDH10B_0119 - outer membrane usher protein 114 44.40 -1 129565..130305 - 246 170079777 ecpD ECDH10B_0120 - periplasmic pilin chaperone 115 44.79 -1 130403..130987 - 194 170079778 yadN ECDH10B_0121 - fimbrial-like adhesin protein 116 50.00 0 131357..131836 - 159 170079779 folK ECDH10B_0122 - 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase 117 55.87 0 131833..133230 - 465 170079780 pcnB ECDH10B_0123 - poly(A) polymerase I 118 53.61 0 133290..134216 - 308 170079781 yadB ECDH10B_0124 - glutamyl-Q tRNA(Asp) synthetase 119 52.63 0 134253..134708 - 151 170079782 dksA ECDH10B_0125 - DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein 120 49.36 0 134886..135590 - 234 170079783 sfsA ECDH10B_0126 - DNA-binding transcriptional regulator 121 55.93 +1 135605..136135 - 176 170079784 ligT ECDH10B_0127 - 2'-5' RNA ligase 122 56.58 +1 136209..138638 + 809 170079785 hrpB ECDH10B_0128 - ATP-dependent helicase 123 55.15 0 138834..141368 + 844 170079786 mrcB ECDH10B_0129 - bifunctional glycosyl transferase and transpeptidase 124 51.20 0 141588..143831 + 747 170079787 fhuA ECDH10B_0130 - ferrichrome outer membrane transporter 125 56.89 +1 143882..144679 + 265 170079788 fhuC ECDH10B_0131 - ATP-binding component of iron-hydroxamate transporter 126 54.66 0 144679..145569 + 296 170079789 fhuD ECDH10B_0132 - iron-hydroxamate ABC transporter periplasmic-binding component 127 59.76 +1 145566..147548 + 660 170079790 fhuB ECDH10B_0133 - iron-hydroxamate ABC transporter membrane protein 128 55.50 0 147706..148986 - 426 170079791 hemL ECDH10B_0134 - glutamate-1-semialdehyde aminotransferase (aminomutase) 129 53.87 0 149211..150632 + 473 170079792 clcA ECDH10B_0135 - chloride channel, voltage-gated 130 50.72 0 150714..151058 + 114 170079793 yadR ECDH10B_0136 - hypothetical protein 131 53.69 0 151105..151728 - 207 170079794 yadS ECDH10B_0137 - inner membrane protein 132 52.93 0 151766..152566 - 266 170079795 btuF ECDH10B_0138 - periplasmic binding component of cobalamin (vitamin B-12) transporter 133 52.36 0 152559..153257 - 232 170079796 pfs ECDH10B_0139 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 134 47.96 0 153341..154858 + 505 170079797 dgt ECDH10B_0140 - deoxyguanosine triphosphate triphosphohydrolase 135 53.96 0 154988..156412 + 474 170079798 degP ECDH10B_0141 - serine endoprotease (protease Do), membrane-associated 136 52.85 0 156567..157724 + 385 170079799 cdaR ECDH10B_0142 - DNA-binding transcriptional activator 137 44.44 -1 157813..158199 - 128 170079800 yaeH ECDH10B_0143 - hypothetical protein 138 51.41 0 158361..159173 - 270 170079801 yaeI ECDH10B_0144 - phosphatase 139 53.09 0 159227..160051 - 274 170079802 dapD ECDH10B_0145 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 140 53.95 0 160082..162754 - 890 170079803 glnD ECDH10B_0146 - uridylyltransferase/uridylyl-removing enzyme 141 50.44 0 162816..163610 - 264 170079804 map ECDH10B_0147 - methionine aminopeptidase 142 51.38 0 163978..164703 + 241 170079805 rpsB ECDH10B_0149 - 30S ribosomal subunit protein S2 143 49.88 0 164961..165812 + 283 170079806 tsf ECDH10B_0150 - protein chain elongation factor EF-Ts 144 52.75 0 165959..166684 + 241 170079807 pyrH ECDH10B_0151 - uridylate kinase 145 50.90 0 166976..167533 + 185 170079808 frr ECDH10B_0152 - ribosome recycling factor 146 52.63 0 167625..168821 + 398 170079809 dxr ECDH10B_0153 - 1-deoxy-d-xylulose 5-phosphate reductoisomerase 147 50.00 0 169007..169768 + 253 170079810 ispU ECDH10B_0154 - undecaprenyl pyrophosphate synthase 148 50.82 0 169781..170638 + 285 170079811 cdsA ECDH10B_0155 - CDP-diglyceride synthase 149 50.92 0 170650..172002 + 450 170079812 rseP ECDH10B_0156 - inner membrane zinc RIP metalloprotease 150 50.68 0 172032..174464 + 810 170079813 ecfK ECDH10B_0157 - hypothetical protein 151 50.21 0 174586..175071 + 161 170079814 skp ECDH10B_0158 - periplasmic chaperone 152 52.83 0 175075..176100 + 341 170079815 lpxD ECDH10B_0159 - UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase 153 50.44 0 176205..176660 + 151 170079816 fabZ ECDH10B_0160 - (3R)-hydroxymyristol acyl carrier protein dehydratase 154 53.11 0 176664..177452 + 262 170079817 lpxA ECDH10B_0161 - UDP-N-acetylglucosamine acetyltransferase 155 53.79 0 177452..178600 + 382 170079818 lpxB ECDH10B_0162 - tetraacyldisaccharide-1-P synthase 156 57.29 +1 178597..179193 + 198 170079819 rnhB ECDH10B_0163 - ribonuclease HII, degrades RNA of DNA-RNA hybrids 157 54.95 0 179230..182712 + 1160 170079820 dnaE ECDH10B_0164 - DNA polymerase III alpha subunit 158 52.29 0 182725..183684 + 319 170079821 accA ECDH10B_0165 - acetyl-CoA carboxylase, carboxytransferase, alpha subunit 159 50.89 0 183783..185924 + 713 170079822 ldcC ECDH10B_0166 - lysine decarboxylase 2, constitutive 160 50.51 0 185981..186370 + 129 170079823 yaeR ECDH10B_0167 - lyase 161 58.04 +1 186435..187733 + 432 170079824 tilS ECDH10B_0168 - tRNA(Ile)-lysidine synthetase 162 47.84 0 187782..188036 - 84 170079825 rof ECDH10B_0169 - modulator of Rho-dependent transcription termination 163 50.75 0 188029..188229 - 66 170079826 yaeP ECDH10B_0170 - hypothetical protein 164 52.38 0 188395..188940 + 181 170079827 yaeQ ECDH10B_0171 - hypothetical protein 165 54.14 0 188937..189359 + 140 170079828 yaeJ ECDH10B_0172 - hypothetical protein 166 52.32 0 189373..190083 + 236 170079829 nlpE ECDH10B_0173 - lipoprotein involved with copper homeostasis and adhesion 167 49.33 0 190283..191107 - 274 170079830 yaeF ECDH10B_0174 - lipoprotein 168 54.51 0 191161..192879 - 572 170079831 proS ECDH10B_0175 - prolyl-tRNA synthetase 169 55.23 0 192991..193698 - 235 170079832 yaeB ECDH10B_0176 - hypothetical protein 170 53.33 0 193695..194099 - 134 170079833 rcsF ECDH10B_0177 - outer membrane protein, signal 171 49.14 0 194217..195032 - 271 170079834 metQ ECDH10B_0178 - receptor component of DL-methionine uptake transporter (MUT) 172 52.29 0 195072..195725 - 217 170079835 metI ECDH10B_0179 - membrane component of DL-methionine uptake transporter (MUT) 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0