version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1098 53.70 0 1222267..1222806 + 179 170080761 ycfJ ECDH10B_1182 - hypothetical protein 1099 51.18 0 1222868..1223500 - 210 170080762 ycfQ ECDH10B_1183 - DNA-binding transcriptional regulator 1100 47.29 0 1223741..1223998 + 85 170080763 ycfR ECDH10B_1184 - hypothetical protein 1101 53.37 0 1224080..1225042 - 320 170080764 ycfS ECDH10B_1185 - hypothetical protein 1102 54.77 0 1225186..1228632 - 1148 170080765 mfd ECDH10B_1186 - transcription-repair coupling factor 1103 49.53 0 1228760..1229833 - 357 170080766 ycfT ECDH10B_1187 - inner membrane protein 1104 54.17 0 1230095..1231294 + 399 170080767 lolC ECDH10B_1188 - outer membrane-specific lipoprotein ABC transporter membrane protein 1105 55.13 0 1231287..1231988 + 233 170080768 lolD ECDH10B_1189 - outer membrane-specific lipoprotein ABC transporter ATP-binding protein 1106 51.89 0 1231988..1233232 + 414 170080769 lolE ECDH10B_1190 - outer membrane-specific lipoprotein ABC transporter membrane protein 1107 52.74 0 1233261..1234172 + 303 170080770 nagK ECDH10B_1191 - N-acetyl-D-glucosamine kinase 1108 51.79 0 1234188..1235027 + 279 170080771 cobB ECDH10B_1192 - deacetylase of acetyl-CoA synthetase, NAD-dependent 1109 42.59 -1 1235147..1235935 - 262 170080772 ycfZ ECDH10B_1193 - inner membrane protein 1110 43.51 -1 1235932..1236393 - 153 170080773 ymfA ECDH10B_1194 - inner membrane protein 1111 50.81 0 1236451..1237497 - 348 170080774 potD ECDH10B_1195 - polyamine ABC transporter periplasmic-binding protein 1112 50.19 0 1237494..1238288 - 264 170080775 potC ECDH10B_1196 - polyamine ABC transporter transmembrane protein 1113 50.85 0 1238285..1239112 - 275 170080776 potB ECDH10B_1197 - polyamine ABC transporter transmembrane protein 1114 50.84 0 1239126..1240262 - 378 170080777 potA ECDH10B_1198 - polyamine ABC transporter ATP-binding protein 1115 49.88 0 1240512..1241738 + 408 170080778 pepT ECDH10B_1199 - peptidase T 1116 54.01 0 1241787..1242908 - 373 170080779 ycfD ECDH10B_1200 - hypothetical protein 1117 51.33 0 1242984..1244444 - 486 170080780 phoQ ECDH10B_1201 - sensory histidine kinase in two-compoent regulatory system with PhoP 1118 47.92 0 1244444..1245115 - 223 170080781 phoP ECDH10B_1202 - DNA-binding response regulator in two-component regulatory system with PhoQ 1119 52.30 0 1245284..1246654 - 456 170080782 purB ECDH10B_1203 - adenylosuccinate lyase 1120 57.17 +1 1246658..1247299 - 213 170080783 hflD ECDH10B_1204 - lysogenization regulator 1121 53.75 0 1247335..1248441 - 368 170080784 mnmA ECDH10B_1205 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1122 50.22 0 1248495..1248956 - 153 170080785 nudJ ECDH10B_1206 - bifunctional thiamin pyrimidine pyrophosphate hydrolase and thiamin pyrophosphate hydrolase 1123 51.22 0 1248966..1249619 - 217 170080786 rluE ECDH10B_1207 - 23S rRNA pseudouridine synthase 1124 50.04 0 1249791..1251041 + 416 170080787 icd ECDH10B_1208 - isocitrate dehydrogenase, specific for NADP+ 1125 33.95 -2 1251144..1251467 - 107 170080788 elbA ECDH10B_1209 - hypothetical protein 1126 36.79 -2 1252167..1252571 - 134 170080789 ycgX ECDH10B_1210 - hypothetical protein 1127 48.77 0 1252792..1253523 - 243 170080790 ycgE ECDH10B_1211 - DNA-binding transcriptional regulator 1128 43.56 -1 1253728..1254939 - 403 170080791 ycgF ECDH10B_1212 - FAD-binding phosphodiesterase 1129 41.77 -1 1255253..1255489 + 78 170080792 ycgZ ECDH10B_1213 - hypothetical protein 1130 37.00 -2 1255532..1255804 + 90 170080793 ymgA ECDH10B_1214 - hypothetical protein 1131 34.83 -2 1255833..1256099 + 88 170080794 ymgB ECDH10B_1215 - hypothetical protein 1132 35.74 -2 1256212..1256460 + 82 170080795 ymgC ECDH10B_1216 - hypothetical protein 1133 44.62 -1 1256792..1258315 + 507 170080796 ycgG ECDH10B_1217 - inner membrane protein 1134 40.18 -2 1258447..1258665 + 72 170080797 ymgF ECDH10B_1218 - hypothetical protein 1135 45.15 -1 1261769..1262098 - 109 170080798 ymgD ECDH10B_1222 - hypothetical protein 1136 53.26 0 1262108..1262383 - 91 170080799 ymgG ECDH10B_1223 - hypothetical protein 1137 32.18 -2 1262454..1262627 - 57 170080800 ymgI ECDH10B_1224 - hypothetical protein 1138 38.17 -2 1262728..1262913 + 61 170080801 ymgJ ECDH10B_1225 - hypothetical protein 1139 43.45 -1 1263743..1264009 - 88 170080802 minE ECDH10B_1227 - cell division topological specificity factor 1140 49.94 0 1264013..1264825 - 270 170080803 minD ECDH10B_1228 - membrane ATPase of the MinC-MinD-MinE system 1141 51.01 0 1264849..1265544 - 231 170080804 minC ECDH10B_1229 - cell division inhibitor 1142 42.28 -1 1266064..1266432 + 122 170080805 ycgJ ECDH10B_1230 - hypothetical protein 1143 43.03 -1 1266535..1266936 - 133 170080806 ycgK ECDH10B_1231 - hypothetical protein 1144 43.12 -1 1267145..1267471 + 108 170080807 ycgL ECDH10B_1232 - hypothetical protein 1145 51.97 0 1267543..1268202 + 219 170080808 ycgM ECDH10B_1233 - isomerase/hydrolase 1146 47.62 0 1268279..1268740 + 153 170080809 ycgN ECDH10B_1234 - hypothetical protein 1147 41.12 -2 1268947..1269858 - 303 170080810 hlyE ECDH10B_1235 - hemolysin E 1148 48.10 0 1270231..1270650 + 139 170080811 umuD ECDH10B_1236 - DNA polymerase V, subunit D 1149 50.99 0 1270650..1271918 + 422 170080812 umuC ECDH10B_1237 - DNA polymerase V, subunit C 1150 52.73 0 1271964..1272494 - 176 170080813 dsbB ECDH10B_1238 - oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I 1151 52.85 0 1272640..1274181 - 513 170080814 nhaB ECDH10B_1239 - sodium:proton antiporter 1152 51.25 0 1274402..1275121 + 239 170080815 fadR ECDH10B_1240 - DNA-binding transcriptional dual regulator of fatty acid metabolism 1153 49.84 0 1275173..1276705 - 510 170080816 ycgB ECDH10B_1241 - hypothetical protein 1154 56.27 +1 1277035..1278333 + 432 170080817 dadA ECDH10B_1242 - D-amino acid dehydrogenase 1155 57.98 +1 1278343..1279413 + 356 170080818 dadX ECDH10B_1243 - alanine racemase 2, PLP-binding 1156 52.33 0 1279799..1281535 - 578 170080819 cvrA ECDH10B_1244 - cation/proton antiporter 1157 53.01 0 1281630..1282544 - 304 170080820 ldcA ECDH10B_1245 - L,D-carboxypeptidase A 1158 51.96 0 1282644..1283255 + 203 170080821 emtA ECDH10B_1246 - lytic murein endotransglycosylase E 1159 50.75 0 1283257..1283991 - 244 170080822 ycgR ECDH10B_1247 - YcgR 1160 53.33 0 1284192..1284446 + 84 170080823 ymgE ECDH10B_1248 - inner membrane protein 1161 41.50 -2 1284624..1285064 + 146 170080824 ycgY ECDH10B_1249 - hypothetical protein 1162 52.30 0 1285143..1286840 - 565 170080825 treA ECDH10B_1250 - periplasmic trehalase 1163 50.18 0 1287160..1288578 - 472 170080826 dhaM ECDH10B_1251 - fused dihydroxyacetone-specific PTS enzymes: HPr component; EI component 1164 53.55 0 1288589..1289221 - 210 170080827 dhaL ECDH10B_1252 - dihydroxyacetone kinase C-terminal domain-containing protein 1165 53.03 0 1289232..1290302 - 356 170080828 dhaK ECDH10B_1253 - dihydroxyacetone kinase N-terminal domain-containing protein 1166 51.46 0 1290530..1292449 + 639 170080829 dhaR ECDH10B_1254 - DNA-binding transcriptional regulator, dihydroxyacetone 1167 49.79 0 1292549..1295416 - 955 170080830 ycgV ECDH10B_1255 - adhesin 1168 51.01 0 1296185..1297276 - 363 170080831 ychF ECDH10B_1256 - GTP-binding protein 1169 49.74 0 1297393..1297977 - 194 170080832 pth ECDH10B_1257 - peptidyl-tRNA hydrolase 1170 53.05 0 1298255..1298533 + 92 170080833 ychH ECDH10B_1258 - inner membrane protein 1171 54.64 0 1298588..1300267 - 559 170080834 ychM ECDH10B_1259 - transporter 1172 52.53 0 1300392..1301339 - 315 170080835 prsA ECDH10B_1260 - phosphoribosylpyrophosphate synthase 1173 53.40 0 1301490..1302341 - 283 170080836 ispE ECDH10B_1261 - 4-diphosphocytidyl-2-C-methylerythritol kinase 1174 51.44 0 1302341..1302964 - 207 170080837 lolB ECDH10B_1262 - chaperone for lipoproteins 1175 54.34 0 1303178..1304434 + 418 170080838 hemA ECDH10B_1263 - glutamyl tRNA reductase 1176 53.00 0 1304476..1305558 + 360 170080839 prfA ECDH10B_1264 - peptide chain release factor RF-1 1177 55.16 0 1305558..1306391 + 277 170080840 prmC ECDH10B_1265 - release factors RF-1 and RF-2 N5-glutamine methyltransferase 1178 47.58 0 1306388..1306780 + 130 170080841 ychQ ECDH10B_1266 - transcriptional regulator 1179 46.42 0 1306784..1307593 + 269 170080842 ychA ECDH10B_1267 - transcriptional regulator 1180 51.58 0 1307629..1308483 + 284 170080843 kdsA ECDH10B_1268 - 3-deoxy-D-manno-octulosonate 8-phosphate synthase 1181 55.56 0 1308632..1308739 - 35 170080844 ldrA ECDH10B_1269 - toxic polypeptide, small 1182 58.33 +1 1309167..1309274 - 35 170080845 ldrB ECDH10B_1271 - toxic polypeptide, small 1183 55.56 0 1309702..1309809 - 35 170080846 ldrC ECDH10B_1273 - toxic polypeptide, small 1184 48.77 0 1310213..1311313 - 366 170080847 chaA ECDH10B_1275 - calcium/sodium:proton antiporter 1185 45.45 -1 1311583..1311813 + 76 170080848 chaB ECDH10B_1276 - cation regulator 1186 54.74 0 1311971..1312666 + 231 170080849 chaC ECDH10B_1277 - regulatory protein for cation transport 1187 51.69 0 1312710..1313063 - 117 170080850 ychN ECDH10B_1278 - hypothetical protein 1188 50.54 0 1313248..1314642 + 464 170080851 ychO ECDH10B_1279 - invasin 1189 51.77 0 1314643..1315293 - 216 170080852 narL ECDH10B_1280 - DNA-binding response regulator in two-component regulatory system with NarX (or NarQ) 1190 53.37 0 1315286..1317082 - 598 170080853 narX ECDH10B_1281 - sensory histidine kinase in two-component regulatory system with NarL 1191 53.66 0 1317421..1318812 + 463 170080854 narK ECDH10B_1282 - nitrate/nitrite transporter 1192 54.94 0 1319328..1323071 + 1247 170080855 narG ECDH10B_1283 - nitrate reductase 1, alpha subunit 1193 53.74 0 1323068..1324606 + 512 170080856 narH ECDH10B_1284 - nitrate reductase 1, beta (Fe-S) subunit 1194 56.40 +1 1324603..1325313 + 236 170080857 narJ ECDH10B_1285 - molybdenum-cofactor-assembly chaperone subunit (delta subunit) of nitrate reductase 1 1195 55.90 +1 1325313..1325990 + 225 170080858 narI ECDH10B_1286 - nitrate reductase 1, gamma (cytochrome b(NR)) subunit 1196 59.42 +1 1326173..1326448 + 91 170080859 ychS ECDH10B_1287 - hypothetical protein 1197 64.44 +2 1326551..1326640 - 29 170080860 tpr ECDH10B_1289 - protamine-like protein 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0