version 1.0
Escherichia coli str. K-12 substr. DH10B, complete genome - 1..4686137 4126 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1004 57.19 +1 1123516..1124106 - 196 170080667 rutE ECDH10B_1080 - oxidoreductase 1005 57.93 +1 1124116..1124916 - 266 170080668 rutD ECDH10B_1081 - hydrolase 1006 54.01 0 1124924..1125310 - 128 170080669 rutC ECDH10B_1082 - hypothetical protein 1007 55.41 0 1125322..1126014 - 230 170080670 rutB ECDH10B_1083 - isochorismatase 1008 55.09 0 1126014..1127162 - 382 170080671 rutA ECDH10B_1084 - monooxygenase 1009 51.33 0 1127393..1128031 + 212 170080672 rutR ECDH10B_1085 - rut operon repressor 1010 56.98 +1 1128071..1132033 - 1320 170080673 putA ECDH10B_1086 - multifunctional proline dehydrogenase, delta-1-pyrroline-5-carboxylate dehydrogenase, and DNA-binding transcriptional regulator 1011 53.68 0 1132456..1133964 + 502 170080674 putP ECDH10B_1087 - proline:sodium symporter 1012 51.33 0 1135394..1136521 + 375 170080675 efeO ECDH10B_1091 - component of a tripartite ferrous iron transporter 1013 53.77 0 1136527..1137798 + 423 170080676 efeB ECDH10B_1092 - redox component of a tripartite ferrous iron transporter 1014 52.21 0 1138143..1139207 + 354 170080677 phoH ECDH10B_1093 - hypothetical protein 1015 44.20 -1 1139257..1139670 - 137 170080678 pgaD ECDH10B_1094 - inner membrane protein 1016 46.68 0 1139672..1140997 - 441 170080679 pgaC ECDH10B_1095 - putative polysaccharide polymerase 1017 44.43 -1 1140990..1143008 - 672 170080680 pgaB ECDH10B_1096 - putatative polysaccharide N-deacetylase/carbohydrate esterase 1018 47.32 0 1143017..1145440 - 807 170080681 pgaA ECDH10B_1097 - putative outer membrane poly-beta-1,6-N-acetyl-D-glucosamine (PGA) translocation/docking protein 1019 55.13 0 1148762..1149628 - 288 170080682 insF-4 ECDH10B_1100 - IS3 element protein InsF 1020 50.16 0 1149625..1149933 - 102 170080683 insE-4 ECDH10B_1101 - IS3 element protein InsE 1021 40.53 -2 1150330..1151316 + 328 170080684 ycdU ECDH10B_1103 - inner membrane protein 1022 51.22 0 1152554..1153492 + 312 170080685 ycdW ECDH10B_1105 - 2-ketoacid reductase 1023 48.37 0 1153547..1154284 + 245 170080686 ycdX ECDH10B_1106 - zinc-binding hydrolase 1024 53.33 0 1154308..1154862 + 184 170080687 ycdY ECDH10B_1107 - hypothetical protein 1025 53.86 0 1154964..1155455 + 163 170080688 ycdZ ECDH10B_1108 - inner membrane protein 1026 50.12 0 1155519..1156352 - 277 170080689 csgG ECDH10B_1109 - outer membrane channel lipoprotein 1027 42.45 -1 1156379..1156795 - 138 170080690 csgF ECDH10B_1110 - transport protein 1028 43.08 -1 1156820..1157209 - 129 170080691 csgE ECDH10B_1111 - transport protein 1029 41.78 -1 1157214..1157864 - 216 170080692 csgD ECDH10B_1112 - DNA-binding transcriptional regulator of adhesion determinants 1030 41.89 -1 1158619..1159074 + 151 170080693 csgB ECDH10B_1113 - curlin nucleator protein, minor subunit in curli complex 1031 51.10 0 1159115..1159570 + 151 170080694 csgA ECDH10B_1114 - cryptic curlin major subunit 1032 42.64 -1 1159629..1159961 + 110 170080695 csgC ECDH10B_1115 - curli production protein 1033 43.59 -1 1160082..1160393 + 103 170080696 ymdA ECDH10B_1116 - hypothetical protein 1034 51.69 0 1160488..1161021 + 177 170080697 ymdB ECDH10B_1117 - hypothetical protein 1035 50.70 0 1161023..1162444 + 473 170080698 ymdC ECDH10B_1118 - hydrolase 1036 43.87 -1 1162452..1163609 - 385 170080699 mdoC ECDH10B_1119 - membrane protein required for modification of periplasmic glucan 1037 49.87 0 1164003..1165538 + 511 170080700 mdoG ECDH10B_1120 - glucan biosynthesis protein, periplasmic 1038 54.87 0 1165531..1168074 + 847 170080701 mdoH ECDH10B_1121 - membrane glycosyltransferase 1039 50.44 0 1168247..1168474 + 75 170080702 yceK ECDH10B_1122 - lipoprotein 1040 50.13 0 1168475..1168849 - 124 170080703 msyB ECDH10B_1123 - hypothetical protein 1041 52.49 0 1168932..1170158 - 408 170080704 mdtG ECDH10B_1124 - drug efflux system 1042 52.99 0 1170330..1171250 - 306 170080705 lpxL ECDH10B_1125 - lauryl-acyl carrier protein (ACP)-dependent acyltransferase 1043 49.76 0 1171475..1172527 + 350 170080706 yceA ECDH10B_1126 - hypothetical protein 1044 47.40 0 1172569..1173144 - 191 170080707 yceI ECDH10B_1127 - secreted protein 1045 51.15 0 1173148..1173714 - 188 170080708 yceJ ECDH10B_1128 - cytochrome b561 1046 37.59 -2 1173975..1174115 - 46 170080709 yceO ECDH10B_1129 - hypothetical protein 1047 52.46 0 1174136..1175254 - 372 170080710 solA ECDH10B_1130 - N-methyltryptophan oxidase, FAD-binding 1048 45.10 -1 1175369..1175623 - 84 170080711 bssS ECDH10B_1131 - regulator of biofilm formation 1049 47.97 0 1175910..1176155 - 81 170080712 dinI ECDH10B_1132 - DNA damage-inducible protein I 1050 53.10 0 1176229..1177275 - 348 170080713 pyrC ECDH10B_1133 - dihydro-orotase 1051 46.88 0 1177381..1177941 - 186 170080714 yceB ECDH10B_1134 - lipoprotein 1052 48.92 0 1178075..1178722 - 215 170080715 grxB ECDH10B_1135 - glutaredoxin 2 1053 55.33 0 1178786..1179994 - 402 170080716 mdtH ECDH10B_1136 - drug efflux system 1054 49.40 0 1180230..1180814 + 194 170080717 rimJ ECDH10B_1137 - ribosomal-protein-S5-alanine N-acetyltransferase 1055 51.85 0 1180825..1181472 + 215 170080718 yceH ECDH10B_1138 - hypothetical protein 1056 55.30 0 1181474..1182397 + 307 170080719 mviM ECDH10B_1139 - oxidoreductase 1057 53.71 0 1182507..1184042 + 511 170080720 yceN ECDH10B_1140 - inner membrane protein 1058 48.20 0 1184082..1184498 - 138 170080721 flgN ECDH10B_1141 - export chaperone for FlgK and FlgL 1059 52.72 0 1184503..1184796 - 97 170080722 flgM ECDH10B_1142 - anti-sigma factor for FliA (sigma 28) 1060 52.27 0 1184872..1185531 - 219 170080723 flgA ECDH10B_1143 - assembly protein for flagellar basal-body periplasmic P ring 1061 53.48 0 1185686..1186102 + 138 170080724 flgB ECDH10B_1144 - flagellar component of cell-proximal portion of basal-body rod 1062 52.84 0 1186106..1186510 + 134 170080725 flgC ECDH10B_1145 - flagellar component of cell-proximal portion of basal-body rod 1063 54.60 0 1186522..1187217 + 231 170080726 flgD ECDH10B_1146 - flagellar hook assembly protein 1064 51.53 0 1187242..1188450 + 402 170080727 flgE ECDH10B_1147 - flagellar hook protein 1065 59.13 +1 1188470..1189225 + 251 170080728 flgF ECDH10B_1148 - flagellar component of cell-proximal portion of basal-body rod 1066 53.77 0 1189397..1190179 + 260 170080729 flgG ECDH10B_1149 - flagellar component of cell-distal portion of basal-body rod 1067 53.51 0 1190232..1190930 + 232 170080730 flgH ECDH10B_1150 - flagellar protein of basal-body outer-membrane L ring 1068 54.19 0 1190942..1192039 + 365 170080731 flgI ECDH10B_1151 - flagellar basal body protein 1069 54.67 0 1192039..1192980 + 313 170080732 flgJ ECDH10B_1152 - muramidase 1070 51.82 0 1193046..1194689 + 547 170080733 flgK ECDH10B_1153 - flagellar hook-filament junction protein 1 1071 50.73 0 1194701..1195654 + 317 170080734 flgL ECDH10B_1154 - flagellar hook-filament junction protein 1072 55.65 0 1195850..1199035 - 1061 170080735 rne ECDH10B_1155 - RNase E 1073 44.55 -1 1199170..1199490 + 106 170080736 yceQ ECDH10B_1156 - hypothetical protein 1074 51.46 0 1199608..1200567 + 319 170080737 rluC ECDH10B_1157 - ribosomal large subunit pseudouridine synthase C 1075 50.09 0 1200679..1201263 - 194 170080738 yceF ECDH10B_1158 - hypothetical protein 1076 49.62 0 1201462..1201983 + 173 170080739 yceD ECDH10B_1160 - hypothetical protein 1077 54.02 0 1202035..1202208 + 57 170080740 rpmF ECDH10B_1161 - 50S ribosomal subunit protein L32 1078 52.10 0 1202289..1203359 + 356 170080741 plsX ECDH10B_1162 - fatty acid/phospholipid synthesis protein 1079 54.72 0 1203427..1204380 + 317 170080742 fabH ECDH10B_1163 - 3-oxoacyl-[acyl-carrier-protein] synthase III 1080 55.16 0 1204396..1205325 + 309 170080743 fabD ECDH10B_1164 - malonyl-CoA-[acyl-carrier-protein] transacylase 1081 51.56 0 1205338..1206072 + 244 170080744 fabG ECDH10B_1165 - 3-oxoacyl-[acyl-carrier-protein] reductase 1082 48.10 0 1206283..1206519 + 78 170080745 acpP ECDH10B_1166 - acyl carrier protein (ACP) 1083 53.30 0 1206607..1207848 + 413 170080746 fabF ECDH10B_1167 - 3-oxoacyl-[acyl-carrier-protein] synthase II 1084 50.62 0 1207968..1208777 + 269 170080747 pabC ECDH10B_1168 - 4-amino-4-deoxychorismate lyase component of para-aminobenzoate synthase multienzyme complex 1085 50.73 0 1208780..1209802 + 340 170080748 yceG ECDH10B_1169 - aminodeoxychorismate lyase 1086 54.05 0 1209792..1210433 + 213 170080749 tmk ECDH10B_1170 - thymidylate kinase 1087 54.03 0 1210430..1211434 + 334 170080750 holB ECDH10B_1171 - DNA polymerase III, delta prime subunit 1088 50.88 0 1211445..1212242 + 265 170080751 ycfH ECDH10B_1172 - metallodependent hydrolase 1089 52.65 0 1212537..1213970 + 477 170080752 ptsG ECDH10B_1173 - fused glucose-specific PTS enzymes: iibcomponent; IIC component 1090 50.00 0 1214030..1216219 - 729 170080753 fhuE ECDH10B_1174 - ferric-rhodotorulic acid outer membrane transporter 1091 50.56 0 1216553..1216912 + 119 170080754 hinT ECDH10B_1175 - purine nucleoside phosphoramidase 1092 49.47 0 1216915..1217292 + 125 170080755 ycfL ECDH10B_1176 - lipoprotein 1093 56.39 +1 1217306..1217947 + 213 170080756 ycfM ECDH10B_1177 - outer membrane lipoprotein 1094 53.33 0 1217928..1218752 + 274 170080757 thiK ECDH10B_1178 - thiamin kinase 1095 53.02 0 1218763..1219788 + 341 170080758 nagZ ECDH10B_1179 - beta-N-acetylglucosaminidase 1096 46.59 0 1219811..1220353 + 180 170080759 ycfP ECDH10B_1180 - hypothetical protein 1097 52.95 0 1220753..1222057 + 434 170080760 ndh ECDH10B_1181 - respiratory NADH dehydrogenase 2/cupric reductase 1098 53.70 0 1222267..1222806 + 179 170080761 ycfJ ECDH10B_1182 - hypothetical protein 1099 51.18 0 1222868..1223500 - 210 170080762 ycfQ ECDH10B_1183 - DNA-binding transcriptional regulator 1100 47.29 0 1223741..1223998 + 85 170080763 ycfR ECDH10B_1184 - hypothetical protein 1101 53.37 0 1224080..1225042 - 320 170080764 ycfS ECDH10B_1185 - hypothetical protein 1102 54.77 0 1225186..1228632 - 1148 170080765 mfd ECDH10B_1186 - transcription-repair coupling factor 1103 49.53 0 1228760..1229833 - 357 170080766 ycfT ECDH10B_1187 - inner membrane protein 51.13 MEAN 4.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0