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Escherichia coli E24377A, complete genome - 1..4979619 4749 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 614 49.97 0 674908..676566 + 552 157157319 dpiB EcE24377A_0642 - sensor histidine kinase DpiB 615 50.37 0 676535..677215 + 226 157156130 dpiA EcE24377A_0643 - two-component response regulator DpiA 616 50.87 0 677256..678641 - 461 157155488 dcuC EcE24377A_0644 - C4-dicarboxylate transporter DcuC 617 29.73 -2 678686..678796 - 36 157157225 - EcE24377A_0645 - hypothetical protein 618 34.26 -2 679000..679107 + 35 157156556 - EcE24377A_0646 - hypothetical protein 619 46.88 0 679230..679790 + 186 157158250 pagP EcE24377A_0647 - palmitoyl transferase for Lipid A 620 43.81 -1 679965..680174 + 69 157157595 cspE EcE24377A_0648 - cold shock protein CspE 621 49.48 0 680228..680611 - 127 157155816 crcB EcE24377A_0649 - CrcB protein 622 53.87 0 680704..681492 + 262 157155257 - EcE24377A_0650 - carbon-nitrogen family hydrolase 623 49.51 0 681621..681824 + 67 157156847 - EcE24377A_0651 - twin arginine translocase protein E 624 53.31 0 681925..682890 - 321 157156344 lipA EcE24377A_0652 - lipoyl synthase 625 41.23 -1 682989..683102 - 37 157156510 - EcE24377A_0653 - hypothetical protein 626 44.97 0 683099..684052 - 317 157154784 - EcE24377A_0654 - putative DNA-binding transcriptional regulator 627 47.82 0 684312..684953 - 213 157155500 lipB EcE24377A_0655 - lipoyltransferase 628 46.21 0 685054..685317 - 87 157158401 - EcE24377A_0656 - hypothetical protein 629 49.75 0 685427..686638 - 403 157159257 dacA EcE24377A_0657 - D-alanyl-D-alanine carboxypeptidase fraction A 630 42.55 -1 686661..686801 + 46 157158169 - EcE24377A_0659 - hypothetical protein 631 57.85 +1 686778..687866 - 362 157158068 rlpA EcE24377A_0658 - rare lipoprotein A 632 52.11 0 687877..688989 - 370 157156312 mrdB EcE24377A_0660 - cell wall shape-determining protein 633 52.68 0 688992..690893 - 633 157155963 mrdA EcE24377A_0661 - penicillin-binding protein 2 634 58.55 +1 690924..691391 - 155 157155267 - EcE24377A_0662 - SPOUT methyltransferase superfamily protein 635 50.94 0 691395..691712 - 105 157157914 - EcE24377A_0663 - hypothetical protein 636 50.33 0 691972..692583 - 203 157156202 cobC EcE24377A_0664 - alpha-ribazole phosphatase 637 49.69 0 692607..693248 - 213 157154723 nadD EcE24377A_0665 - nicotinic acid mononucleotide adenylyltransferase 638 52.62 0 693250..694281 - 343 157155534 holA EcE24377A_0666 - DNA polymerase III subunit delta 639 52.41 0 694281..694862 - 193 157158850 - EcE24377A_0667 - LPS-assembly lipoprotein RplB 640 53.16 0 694877..697459 - 860 157158979 leuS EcE24377A_0668 - leucyl-tRNA synthetase 641 51.97 0 697694..698176 + 160 157158052 - EcE24377A_0669 - hypothetical protein 642 48.02 0 698246..699103 - 285 157156509 - EcE24377A_0670 - hypothetical protein 643 41.38 -1 699051..699224 - 57 157156200 - EcE24377A_0671 - hypothetical protein 644 32.62 -2 699214..699354 + 46 157156748 - EcE24377A_0672 - hypothetical protein 645 45.90 0 699388..700095 + 235 157155864 - EcE24377A_0673 - hypothetical protein 646 47.62 0 700092..701519 + 475 157155170 - EcE24377A_0674 - DnaJ domain-containing protein 647 42.70 -1 701529..702083 - 184 157159260 - EcE24377A_0675 - hypothetical protein 648 47.60 0 702185..702892 + 235 157158446 - EcE24377A_0676 - hypothetical protein 649 47.38 0 702889..704340 + 483 157157945 - EcE24377A_0677 - DnaJ domain-containing protein 650 49.61 0 704400..706070 - 556 157157133 hscC EcE24377A_0678 - DnaK family protein HscC 651 51.07 0 706154..707089 - 311 157156069 - EcE24377A_0679 - ribonucleoside hydrolase 1 652 51.93 0 707207..707932 - 241 157156502 gltL EcE24377A_0680 - glutamate/aspartate ABC transporter, ATP-binding protein 653 49.63 0 707932..708606 - 224 157155672 gltK EcE24377A_0681 - glutamate/aspartate ABC transporter, permease protein GltK 654 52.63 0 708606..709346 - 246 157155111 gltJ EcE24377A_0682 - glutamate/aspartate ABC transporter, permease protein GltJ 655 48.40 0 709516..710424 - 302 157157607 gltI EcE24377A_0683 - glutamate and aspartate transporter subunit 656 48.78 0 710559..710681 + 40 157159333 - EcE24377A_0684 - hypothetical protein 657 49.47 0 710879..712756 + 625 157159255 - EcE24377A_0685 - S54 family peptidase 658 55.95 0 712834..714372 - 512 157158732 lnt EcE24377A_0686 - apolipoprotein N-acyltransferase 659 51.54 0 714397..715275 - 292 157154891 corC EcE24377A_0687 - magnesium and cobalt efflux protein CorC 660 51.50 0 715365..715832 - 155 157156781 - EcE24377A_0688 - putative metalloprotease 661 54.76 0 715829..716869 - 346 157157740 - EcE24377A_0689 - PhoH family protein 662 50.00 0 716888..717031 + 47 157159267 - EcE24377A_0691 - hypothetical protein 663 53.96 0 717022..718446 - 474 157157673 miaB EcE24377A_0690 - tRNA-I(6)A37 thiotransferase enzyme MiaB 664 56.12 +1 718592..719767 + 391 157158593 ubiF EcE24377A_0692 - 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 665 52.25 0 720893..722557 - 554 157156873 asnB EcE24377A_0699 - asparagine synthetase B 666 53.92 0 722814..723566 - 250 157155303 nagD EcE24377A_0700 - UMP phosphatase 667 53.32 0 723614..724834 - 406 157158174 nagC EcE24377A_0701 - N-acetylglucosamine repressor 668 52.22 0 724843..725991 - 382 157156004 nagA1 EcE24377A_0702 - N-acetylglucosamine-6-phosphate deacetylase 669 48.31 0 726051..726851 - 266 157159152 nagB EcE24377A_0703 - glucosamine-6-phosphate deaminase 670 54.55 0 727184..729130 + 648 157155109 nagE EcE24377A_0705 - N-acetyl glucosamine specific PTS system components IIABC 671 43.09 -1 729100..729222 - 40 157157357 - EcE24377A_0704 - hypothetical protein 672 52.97 0 729333..730997 + 554 157159259 glnS EcE24377A_0706 - glutaminyl-tRNA synthetase 673 39.25 -1 731000..731185 - 61 157156481 - EcE24377A_0707 - hypothetical protein 674 35.24 -2 731148..731252 - 34 157157009 - EcE24377A_0708 - hypothetical protein 675 51.46 0 731443..732849 + 468 157158347 oprD EcE24377A_0709 - porin D 676 47.71 0 732899..733225 + 108 157155578 - EcE24377A_0710 - putative lipoprotein 677 47.87 0 733310..733756 - 148 157156224 fur EcE24377A_0711 - ferric uptake regulator 678 48.46 0 734045..734692 - 215 157157770 fldA EcE24377A_0712 - flavodoxin FldA 679 53.74 0 734715..735008 - 97 157154857 - EcE24377A_0713 - LexA regulated protein 680 50.72 0 735148..735912 - 254 157156449 - EcE24377A_0714 - hypothetical protein 681 49.63 0 736097..736642 + 181 157155619 seqA EcE24377A_0715 - replication initiation regulator SeqA 682 55.45 0 736668..738308 + 546 157155077 pgm EcE24377A_0716 - phosphoglucomutase 683 50.45 0 738364..739683 - 439 157159107 potE EcE24377A_0717 - putrescine transporter 684 48.37 0 739680..741887 - 735 157158479 speF EcE24377A_0718 - ornithine decarboxylase 685 21.48 -2 742412..742546 + 44 157154803 - EcE24377A_0719 - hypothetical protein 686 57.37 +1 742568..743245 - 225 157155566 kdpE EcE24377A_0720 - DNA-binding transcriptional activator KdpE 687 57.65 +1 743242..745926 - 894 157157107 kdpD EcE24377A_0721 - sensor protein KdpD 688 53.93 0 745919..746491 - 190 157156599 kdpC EcE24377A_0722 - potassium-transporting ATPase subunit C 689 56.12 +1 746500..748548 - 682 157159118 kdpB EcE24377A_0723 - potassium-transporting ATPase subunit B 690 55.50 0 748571..750244 - 557 157158452 kdpA EcE24377A_0724 - potassium-transporting ATPase subunit A 691 46.57 0 750244..750447 - 67 157155728 kdpF EcE24377A_0725 - K+-transporting ATPase, F subunit 692 50.24 0 750645..750851 + 68 157155052 - EcE24377A_0726 - hypothetical protein 693 59.78 +1 751094..755287 + 1397 157155232 - EcE24377A_0727 - protein rhsA precursor 694 54.46 0 755731..757164 + 477 157156917 - EcE24377A_0728 - RHS domain-containing protein 695 36.49 -2 757161..757730 + 189 157157299 - EcE24377A_0729 - hypothetical protein 696 38.04 -2 757956..758210 + 84 157158968 - EcE24377A_0730 - ISEc2, transposase 697 50.00 0 759245..759754 + 169 157158604 - EcE24377A_0732 - hypothetical protein 698 53.14 0 759751..761169 + 472 157154932 phrB EcE24377A_0733 - deoxyribodipyrimidine photolyase 699 51.96 0 761211..762692 - 493 157156984 - EcE24377A_0734 - amino acid/peptide transporter 700 53.23 0 762963..763706 + 247 157157712 - EcE24377A_0735 - putative hydrolase-oxidase 701 57.53 +1 763729..764385 + 218 157157256 - EcE24377A_0736 - allophanate hydrolase, subunit 1 702 56.06 0 764379..765311 + 310 157159077 - EcE24377A_0737 - allophanate hydrolase, subunit 2 703 56.73 +1 765301..766035 + 244 157158558 - EcE24377A_0738 - hypothetical protein 704 52.27 0 766071..766862 + 263 157155050 nei EcE24377A_0740 - endonuclease VIII 705 44.26 -1 768056..769117 - 353 157155342 - EcE24377A_0742 - hypothetical protein 706 49.59 0 769114..769845 - 243 157156567 - EcE24377A_0743 - periplasmic pilus chaperone family protein 707 49.80 0 769860..772361 - 833 157156026 - EcE24377A_0744 - fimbrial usher family protein 708 47.80 0 772370..772936 - 188 157158772 - EcE24377A_0745 - putative type 1 fimbrial protein 709 21.71 -2 773008..773136 - 42 157158265 - EcE24377A_0746 - hypothetical protein 710 50.08 0 773327..774610 - 427 157155745 gltA EcE24377A_0747 - type II citrate synthase 711 49.14 0 775304..775708 + 134 157154902 sdhC EcE24377A_0748 - succinate dehydrogenase cytochrome b556 large membrane subunit 712 50.86 0 775702..776049 + 115 157156814 sdhD EcE24377A_0749 - succinate dehydrogenase cytochrome b556 small membrane subunit 713 56.03 0 776049..777815 + 588 157156147 sdhA EcE24377A_0750 - succinate dehydrogenase flavoprotein subunit 50.48 MEAN 5.64 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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