version 1.0
Escherichia coli E24377A, complete genome - 1..4979619 4749 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 4047 54.10 0 4237365..4237889 + 174 157157090 - EcE24377A_4248 - hypothetical protein 4048 55.24 0 4237446..4237865 - 139 157157156 atpC EcE24377A_4246 - F0F1 ATP synthase subunit epsilon 4049 54.95 0 4237886..4239268 - 460 157156404 atpD EcE24377A_4247 - F0F1 ATP synthase subunit beta 4050 53.36 0 4239295..4240158 - 287 157155717 atpG EcE24377A_4249 - F0F1 ATP synthase subunit gamma 4051 53.37 0 4240209..4241750 - 513 157155061 atpA EcE24377A_4250 - F0F1 ATP synthase subunit alpha 4052 51.69 0 4241763..4242296 - 177 157158846 atpH EcE24377A_4251 - F0F1 ATP synthase subunit delta 4053 52.65 0 4242311..4242781 - 156 157156607 atpF EcE24377A_4252 - F0F1 ATP synthase subunit B 4054 54.17 0 4242843..4243082 - 79 157157985 atpE EcE24377A_4253 - F0F1 ATP synthase subunit C 4055 50.00 0 4243129..4243944 - 271 157156239 atpB EcE24377A_4254 - F0F1 ATP synthase subunit A 4056 51.97 0 4243953..4244333 - 126 157159303 atpI EcE24377A_4255 - F0F1 ATP synthase subunit I 4057 54.66 0 4245641..4247530 - 629 157155354 gidA EcE24377A_4257 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 4058 49.77 0 4247909..4248352 - 147 157158881 mioC EcE24377A_4258 - flavodoxin 4059 49.46 0 4248442..4248900 - 152 157155705 asnC EcE24377A_4259 - DNA-binding transcriptional regulator AsnC 4060 55.89 0 4249052..4250044 + 330 157156517 asnA EcE24377A_4260 - asparagine synthetase AsnA 4061 52.82 0 4250049..4251500 - 483 157158067 - EcE24377A_4261 - hypothetical protein 4062 49.57 0 4251494..4252990 - 498 157157819 - EcE24377A_4262 - regulatory ATPase RavA 4063 51.47 0 4253213..4255081 + 622 157159419 kup EcE24377A_4263 - potassium transport protein Kup 4064 46.90 0 4255248..4255667 + 139 157159151 rbsD EcE24377A_4264 - D-ribose pyranase 4065 51.26 0 4255675..4257180 + 501 157158385 rbsA EcE24377A_4265 - D-ribose transporter ATP binding protein 4066 53.42 0 4257185..4258150 + 321 157155741 rbsC EcE24377A_4266 - ribose ABC transporter permease protein 4067 53.22 0 4258181..4259065 + 294 157155054 rbsB EcE24377A_4267 - D-ribose transporter subunit RbsB 4068 52.26 0 4259191..4260120 + 309 157157898 rbsK EcE24377A_4268 - ribokinase 4069 50.65 0 4260124..4261116 + 330 157156677 rbsR EcE24377A_4270 - transcriptional repressor RbsR 4070 49.57 0 4261082..4262485 - 467 157157369 - EcE24377A_4269 - DHA2 family drug:H+ antiporter-1 4071 49.49 0 4262532..4263224 - 230 157156315 - EcE24377A_4271 - GntR family transcriptional regulator 4072 48.45 0 4269025..4269864 - 279 157157500 hdfR EcE24377A_4276 - transcriptional regulator HdfR 4073 48.38 0 4269983..4270321 + 112 157159390 - EcE24377A_4277 - hypothetical protein 4074 51.08 0 4270347..4271867 - 506 157156172 - EcE24377A_4278 - putative ATP-dependent protease 4075 54.28 0 4272458..4274104 + 548 157158014 ilvG EcE24377A_4279 - acetolactate synthase 2 catalytic subunit 4076 49.62 0 4274101..4274364 + 87 157154747 ilvM EcE24377A_4280 - acetolactate synthase 2 regulatory subunit 4077 54.84 0 4274384..4275313 + 309 157158223 ilvE EcE24377A_4281 - branched-chain amino acid aminotransferase 4078 56.62 +1 4275378..4277228 + 616 157155507 ilvD EcE24377A_4282 - dihydroxy-acid dehydratase 4079 58.32 +1 4277231..4278775 + 514 157159450 ilvA EcE24377A_4284 - threonine dehydratase 4080 57.13 +1 4278772..4279662 - 296 157158220 ilvY EcE24377A_4283 - DNA-binding transcriptional regulator IlvY 4081 54.54 0 4279812..4281287 + 491 157156237 ilvC EcE24377A_4285 - ketol-acid reductoisomerase 4082 51.77 0 4281374..4281655 - 93 157159000 ppiC EcE24377A_4286 - peptidyl-prolyl cis-trans isomerase C 4083 42.67 -1 4281854..4282303 - 149 157157554 - EcE24377A_4287 - hypothetical protein 4084 53.86 0 4282520..4284541 + 673 157154755 rep EcE24377A_4288 - ATP-dependent DNA helicase Rep 4085 53.80 0 4284588..4286072 - 494 157155434 gppA EcE24377A_4289 - guanosine pentaphosphate phosphohydrolase 4086 49.49 0 4286178..4286276 + 32 157156015 - EcE24377A_4291 - hypothetical protein 4087 52.13 0 4286206..4287471 - 421 157156932 rhlB EcE24377A_4290 - ATP-dependent RNA helicase RhlB 4088 50.91 0 4287602..4287931 + 109 157158635 trx EcE24377A_4292 - thioredoxin 4089 50.16 0 4288258..4289517 + 419 157155913 rho EcE24377A_4293 - transcription termination factor Rho 4090 40.64 -1 4289527..4289745 + 72 157159061 - EcE24377A_4294 - hypothetical protein 4091 49.28 0 4289757..4290860 + 367 157158592 wecA EcE24377A_4295 - undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 4092 52.72 0 4290872..4291918 + 348 157155763 - EcE24377A_4296 - lipopolysaccharide biosynthesis protein WzzE 4093 52.17 0 4291974..4293104 + 376 157156617 - EcE24377A_4297 - UDP-N-acetylglucosamine 2-epimerase 4094 54.00 0 4293101..4294363 + 420 157158288 wecC EcE24377A_4298 - UDP-N-acetyl-D-mannosamine dehydrogenase 4095 53.56 0 4294363..4295430 + 355 157155600 rfbB1 EcE24377A_4299 - dTDP-glucose 4,6-dehydratase 4096 55.10 0 4295449..4296330 + 293 157157955 rfbA2 EcE24377A_4300 - glucose-1-phosphate thymidylyltransferase 4097 54.40 0 4296437..4296982 + 181 157159420 wecD EcE24377A_4301 - TDP-fucosamine acetyltransferase 4098 54.20 0 4296987..4298117 + 376 157158755 wecE EcE24377A_4302 - TDP-4-oxo-6-deoxy-D-glucose transaminase 4099 53.48 0 4298119..4299369 + 416 157158132 - EcE24377A_4304 - polysaccharide biosynthesis protein 4100 47.31 0 4299318..4299410 - 30 157158118 - EcE24377A_4303 - hypothetical protein 4101 52.78 0 4299366..4300445 + 359 157157567 wecF EcE24377A_4305 - 4-alpha-L-fucosyltransferase 4102 52.25 0 4300442..4301794 + 450 157157055 wzyE EcE24377A_4306 - putative enterobacterial common antigen polymerase 4103 53.58 0 4301797..4302537 + 246 157156033 - EcE24377A_4307 - putative UDP-N-acetyl-D-mannosaminuronic acid transferase 4104 37.37 -2 4302608..4302706 - 32 157154802 - EcE24377A_4308 - hypothetical protein 4105 53.39 0 4302728..4304113 + 461 157159029 - EcE24377A_4309 - putative transport protein YifK 4106 51.38 0 4304799..4306034 + 411 157158579 aslB EcE24377A_4314 - arylsulfatase-activating protein AslB 4107 51.85 0 4306118..4306279 - 53 157159354 - EcE24377A_4315 - arylsulfatase, truncation 4108 31.88 -2 4306422..4306559 - 45 157158160 - EcE24377A_4316 - hypothetical protein 4109 54.55 0 4306958..4308154 - 398 157157643 hemY EcE24377A_4317 - putative protoheme IX biogenesis protein 4110 53.77 0 4308157..4309350 - 397 157157263 - EcE24377A_4318 - putative uroporphyrinogen III C-methyltransferase 4111 53.31 0 4309372..4310112 - 246 157156739 hemD EcE24377A_4319 - uroporphyrinogen-III synthase 4112 55.35 0 4310109..4311071 - 320 157156845 hemC EcE24377A_4320 - porphobilinogen deaminase 4113 51.98 0 4311437..4313983 + 848 157156146 cyaA EcE24377A_4321 - adenylate cyclase 4114 53.27 0 4314023..4314343 - 106 157155891 cyaY EcE24377A_4322 - frataxin-like protein 4115 45.81 0 4314391..4315704 - 437 157155110 - EcE24377A_4323 - hypothetical protein 4116 48.82 0 4315701..4317179 - 492 157159280 - EcE24377A_4324 - putative lipoprotein 4117 43.70 -1 4318108..4318242 - 44 157156742 - EcE24377A_4326 - hypothetical protein 4118 51.96 0 4318451..4318654 + 67 157154951 - EcE24377A_4327 - putative lipoprotein 4119 55.52 0 4318691..4319515 + 274 157158618 dapF EcE24377A_4328 - diaminopimelate epimerase 4120 54.66 0 4319512..4320219 + 235 157158556 - EcE24377A_4329 - hypothetical protein 4121 53.73 0 4320216..4321112 + 298 157159369 xerC EcE24377A_4330 - site-specific tyrosine recombinase XerC 4122 55.79 0 4321112..4321828 + 238 157157210 - EcE24377A_4331 - flavin mononucleotide phosphatase 4123 57.56 +1 4321912..4324074 + 720 157158058 uvrD EcE24377A_4332 - DNA-dependent helicase II 4124 47.84 0 4324221..4324985 - 254 157158314 - EcE24377A_4333 - hypothetical protein 4125 43.70 -1 4324977..4325111 + 44 157158684 - EcE24377A_4334 - hypothetical protein 4126 53.00 0 4325355..4326305 + 316 157159364 corA EcE24377A_4335 - magnesium/nickel/cobalt transporter CorA 4127 30.39 -2 4326311..4326412 + 33 157155571 - EcE24377A_4337 - hypothetical protein 4128 33.75 -2 4326359..4326838 - 159 157154904 - EcE24377A_4336 - hypothetical protein 4129 32.04 -2 4326835..4327683 - 282 157157285 - EcE24377A_4338 - hypothetical protein 4130 44.61 -1 4327813..4328016 + 67 157157940 - EcE24377A_4339 - hypothetical protein 4131 50.79 0 4328986..4329873 - 295 157158296 rarD EcE24377A_4340 - RarD protein 4132 52.47 0 4329925..4330410 - 161 157158817 - EcE24377A_4341 - hypothetical protein 4133 51.03 0 4330557..4331426 + 289 157159347 pldA EcE24377A_4342 - phospholipase A 4134 54.81 0 4331559..4333388 + 609 157157237 recQ EcE24377A_4343 - ATP-dependent DNA helicase RecQ 4135 52.36 0 4333458..4334072 + 204 157157002 rhtC EcE24377A_4344 - threonine efflux system 4136 52.01 0 4334134..4334754 - 206 157155928 rhtB EcE24377A_4345 - homoserine/homoserine lactone efflux protein 4137 53.67 0 4334865..4335887 + 340 157155555 pldB EcE24377A_4346 - lysophospholipase L2 4138 51.56 0 4335895..4336695 + 266 157155533 - EcE24377A_4347 - putative sugar phosphatase 4139 55.44 0 4336771..4337670 + 299 157158733 - EcE24377A_4349 - 10 TMS drug/metabolite exporter (DME) family protein 4140 56.60 +1 4337558..4338511 - 317 157154863 metR EcE24377A_4348 - transcriptional regulator MetR 4141 55.44 0 4338628..4340889 + 753 157158034 metE EcE24377A_4350 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 4142 54.53 0 4340928..4341743 - 271 157157944 - EcE24377A_4351 - dienelactone hydrolase family protein 4143 54.07 0 4342005..4342766 + 253 157155953 udp EcE24377A_4352 - uridine phosphorylase 4144 52.80 0 4342907..4344334 + 475 157154849 rmuC EcE24377A_4353 - DNA recombination protein RmuC 4145 51.98 0 4344429..4345184 + 251 157156758 ubiE EcE24377A_4354 - ubiquinone/menaquinone biosynthesis methyltransferase 4146 55.61 0 4345198..4345803 + 201 157156110 - EcE24377A_4355 - hypothetical protein 50.48 MEAN 5.64 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0