version 1.0
Escherichia coli E24377A, complete genome - 1..4979619 4749 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3936 47.37 0 4121094..4121891 - 265 157158623 rfaP EcE24377A_4131 - lipopolysaccharide core biosynthesis protein RfaP 3937 48.36 0 4121884..4123008 - 374 157157470 rfaG EcE24377A_4132 - lipopolysaccharide core biosynthesis protein RfaG 3938 47.12 0 4123005..4124027 - 340 157157104 rfaQ EcE24377A_4133 - lipopolysaccharide core biosynthesis protein 3939 53.91 0 4124476..4125753 + 425 157157302 waaA EcE24377A_4134 - 3-deoxy-D-manno-octulosonic-acid transferase 3940 53.12 0 4125761..4126240 + 159 157158987 coaD EcE24377A_4135 - phosphopantetheine adenylyltransferase 3941 54.32 0 4126279..4127088 - 269 157158292 mutM EcE24377A_4136 - formamidopyrimidine-DNA glycosylase 3942 40.48 -1 4127186..4127353 - 55 157155857 rpmG EcE24377A_4137 - 50S ribosomal protein L33 3943 53.16 0 4127374..4127610 - 78 157155847 rpmB EcE24377A_4138 - 50S ribosomal protein L28 3944 47.98 0 4127827..4128495 - 222 157155076 radC EcE24377A_4139 - DNA repair protein RadC 3945 53.48 0 4128667..4129887 + 406 157156838 coaBC EcE24377A_4140 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 3946 54.61 0 4129868..4130323 + 151 157157952 dut EcE24377A_4141 - deoxyuridine 5'-triphosphate nucleotidohydrolase 3947 52.60 0 4130430..4131026 + 198 157157966 - EcE24377A_4142 - nucleoid occlusion protein 3948 53.12 0 4131063..4131704 - 213 157157293 pyrE EcE24377A_4143 - orotate phosphoribosyltransferase 3949 56.62 +1 4131770..4132486 - 238 157158506 rph EcE24377A_4144 - ribonuclease PH 3950 53.82 0 4132613..4133476 + 287 157155093 - EcE24377A_4145 - hypothetical protein 3951 46.81 0 4133493..4133633 - 46 157157093 - EcE24377A_4146 - hypothetical protein 3952 47.64 0 4133697..4134521 + 274 157157859 - EcE24377A_4147 - DNA-damage-inducible protein D 3953 53.24 0 4134813..4135430 + 205 157157348 - EcE24377A_4149 - hypothetical protein 3954 52.81 0 4135427..4137115 - 562 157158891 ligB EcE24377A_4148 - NAD-dependent DNA ligase LigB 3955 48.88 0 4137367..4137990 + 207 157158438 gmk EcE24377A_4151 - guanylate kinase 3956 53.26 0 4138045..4138320 + 91 157155218 rpoZ EcE24377A_4152 - DNA-directed RNA polymerase subunit omega 3957 53.67 0 4138339..4140447 + 702 157156870 spoT EcE24377A_4153 - bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 3958 55.65 0 4140454..4141143 + 229 157156957 trmH EcE24377A_4154 - tRNA guanosine-2'-O-methyltransferase 3959 57.16 +1 4141149..4143230 + 693 157155919 recG EcE24377A_4156 - ATP-dependent DNA helicase RecG 3960 50.29 0 4143215..4144081 - 288 157155212 - EcE24377A_4155 - hypothetical protein 3961 54.31 0 4144084..4145289 - 401 157155900 gltS EcE24377A_4157 - sodium/glutamate symporter 3962 55.03 0 4145569..4146960 + 463 157158354 yicE EcE24377A_4158 - xanthine permease 3963 53.92 0 4147081..4148790 + 569 157159023 - EcE24377A_4159 - AsmA family protein 3964 51.96 0 4148843..4151161 - 772 157157323 yicI EcE24377A_4160 - alpha-xylosidase YicI 3965 46.10 0 4151129..4151269 + 46 157157917 - EcE24377A_4162 - hypothetical protein 3966 49.17 0 4151171..4152610 - 479 157157276 - EcE24377A_4161 - putative transporter 3967 34.07 -2 4153479..4153613 + 44 157159308 - EcE24377A_4165 - hypothetical protein 3968 46.16 0 4153576..4154760 + 394 157154878 setC EcE24377A_4166 - sugar efflux transporter C 3969 48.81 0 4154871..4155794 + 307 157155559 - EcE24377A_4167 - carboxylate/amino acid/amine transporter 3970 47.25 0 4155798..4156616 - 272 157155413 nlpA EcE24377A_4168 - cytoplasmic membrane lipoprotein-28 3971 42.86 -1 4156838..4157131 + 97 157156083 - EcE24377A_4169 - hypothetical protein 3972 52.21 0 4157172..4158527 - 451 157157594 nepI EcE24377A_4170 - ribonucleoside transporter 3973 52.76 0 4158573..4159025 - 150 157157145 - EcE24377A_4171 - hypothetical protein 3974 47.35 0 4159078..4160490 - 470 157158084 - EcE24377A_4172 - sulfate permease family inorganic anion transporter 3975 54.61 0 4160587..4162353 + 588 157158837 ade EcE24377A_4173 - cryptic adenine deaminase 3976 53.09 0 4162398..4163789 - 463 157159158 uhpT EcE24377A_4174 - sugar phosphate antiporter 3977 54.85 0 4163927..4165246 - 439 157155233 uhpC EcE24377A_4175 - regulatory protein UhpC 3978 56.89 +1 4165256..4166749 - 497 157156876 uhpB EcE24377A_4176 - sensory histidine kinase UhpB 3979 46.49 0 4166658..4166771 - 37 157156342 - EcE24377A_4177 - hypothetical protein 3980 59.05 +1 4166758..4167348 - 196 157156118 uhpA EcE24377A_4178 - DNA-binding transcriptional activator UhpA 3981 48.11 0 4167422..4167712 - 96 157157982 ilvN EcE24377A_4179 - acetolactate synthase 1 regulatory subunit 3982 56.48 +1 4167716..4169404 - 562 157157654 ilvB EcE24377A_4180 - acetolactate synthase catalytic subunit 3983 57.22 +1 4170681..4171865 + 394 157158889 emrD EcE24377A_4181 - multidrug resistance protein D 3984 53.82 0 4171873..4172370 - 165 157158721 - EcE24377A_4182 - hypothetical protein 3985 50.14 0 4172367..4172729 - 120 157155834 - EcE24377A_4183 - hypothetical protein 3986 52.30 0 4172719..4173066 - 115 157155480 - EcE24377A_4184 - hypothetical protein 3987 48.00 0 4173176..4173625 + 149 157157962 - EcE24377A_4185 - hypothetical protein 3988 51.94 0 4173672..4175165 - 497 157157618 - EcE24377A_4186 - sulfatase 3989 53.73 0 4175162..4176877 - 571 157159014 - EcE24377A_4187 - putative symporter YidK 3990 43.51 -1 4177044..4177937 + 297 157155026 - EcE24377A_4189 - AraC family transcriptional regulator 3991 51.44 0 4178748..4180625 - 625 157157824 - EcE24377A_4190 - PTS system, alpha-glucoside-specific IIBC component 3992 50.77 0 4180660..4181376 + 238 157157178 - EcE24377A_4192 - GntR family transcriptional regulator 3993 52.77 0 4181373..4183034 - 553 157159179 - EcE24377A_4191 - hypothetical protein 3994 43.21 -1 4183065..4183226 + 53 157159428 - EcE24377A_4193 - hypothetical protein 3995 48.95 0 4183231..4183659 - 142 157157574 ibpB EcE24377A_4194 - heat shock chaperone IbpB 3996 47.34 0 4183771..4184184 - 137 157155984 ibpA EcE24377A_4195 - heat shock protein IbpA 3997 46.24 0 4184383..4184475 - 30 157155591 - EcE24377A_4196 - hypothetical protein 3998 50.98 0 4184415..4184822 + 135 157158540 - EcE24377A_4197 - hypothetical protein 3999 55.23 0 4184824..4186038 - 404 157158706 - EcE24377A_4198 - hypothetical protein 4000 50.89 0 4186139..4187203 + 354 157159239 - EcE24377A_4200 - putative oxidoreductase 4001 53.14 0 4187200..4188537 - 445 157157668 - EcE24377A_4199 - d-galactonate transporter 4002 51.87 0 4188612..4189760 - 382 157158203 - EcE24377A_4201 - mandelate racemase/muconate lactonizing enzyme family protein 4003 59.06 +1 4189757..4190374 - 205 157156056 - EcE24377A_4202 - 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 4004 54.61 0 4190358..4191236 - 292 157158999 dgoK EcE24377A_4203 - 2-dehydro-3-deoxygalactonokinase 4005 55.07 0 4191233..4191922 - 229 157157269 dgoR EcE24377A_4204 - galactonate operon transcriptional repressor 4006 43.18 -1 4192095..4192856 + 253 157157741 - EcE24377A_4205 - hypothetical protein 4007 51.29 0 4192902..4193714 - 270 157157907 yidA EcE24377A_4206 - sugar phosphatase 4008 50.63 0 4193829..4194227 - 132 157156966 - EcE24377A_4207 - hypothetical protein 4009 46.08 0 4194360..4194461 + 33 157155028 - EcE24377A_4208 - hypothetical protein 4010 55.24 0 4194467..4196881 - 804 157155879 gyrB EcE24377A_4209 - DNA gyrase subunit B 4011 54.56 0 4196910..4197983 - 357 157155989 recF EcE24377A_4210 - recombination protein F 4012 54.77 0 4197983..4199083 - 366 157156673 dnaN EcE24377A_4211 - DNA polymerase III subunit beta 4013 53.85 0 4199088..4200491 - 467 157155055 dnaA EcE24377A_4212 - chromosomal replication initiation protein 4014 51.77 0 4201098..4201238 + 46 157157421 rpmH EcE24377A_4213 - 50S ribosomal protein L34 4015 55.83 0 4201255..4201614 + 119 157156562 rnpA EcE24377A_4214 - ribonuclease P 4016 53.79 0 4201838..4203484 + 548 157156055 - EcE24377A_4215 - putative inner membrane protein translocase component YidC 4017 56.48 +1 4203590..4204954 + 454 157155417 trmE EcE24377A_4216 - tRNA modification GTPase TrmE 4018 50.35 0 4205492..4206907 + 471 157155675 tnaA EcE24377A_4217 - tryptophanase 4019 46.71 0 4206998..4208245 + 415 157158998 tnaB EcE24377A_4218 - tryptophan permease TnaB 4020 52.81 0 4208377..4209552 + 391 157159363 mdtL EcE24377A_4219 - multidrug efflux system protein MdtL 4021 52.29 0 4209527..4210486 + 319 157157265 - EcE24377A_4220 - DNA-binding transcriptional regulator YidZ 4022 52.53 0 4210643..4211392 + 249 157156582 - EcE24377A_4221 - hypothetical protein 4023 52.91 0 4211414..4211980 + 188 157156262 - EcE24377A_4222 - NADPH-dependent FMN reductase 4024 53.96 0 4212034..4213371 - 445 157156784 - EcE24377A_4223 - sulfate permease family inorganic anion transporter 4025 48.35 0 4213538..4214203 + 221 157154762 yieH EcE24377A_4224 - 6-phosphogluconate phosphatase 4026 43.88 -1 4214270..4214743 + 157 157155421 - EcE24377A_4225 - putative inner membrane protein 4027 44.22 -1 4214792..4215379 + 195 157155247 - EcE24377A_4226 - hypothetical protein 4028 49.65 0 4215441..4216163 - 240 157155622 - EcE24377A_4227 - putative 6-phosphogluconolactonase 4029 50.50 0 4216178..4217272 - 364 157158571 - EcE24377A_4228 - putative esterase 4030 45.21 0 4217374..4218990 - 538 157159088 bglH EcE24377A_4229 - glucoside specific outer membrane porin BglH 4031 48.24 0 4219076..4220470 - 464 157156633 - EcE24377A_4230 - 6-phospho-beta-glucosidase 4032 51.60 0 4220489..4222366 - 625 157157352 bglF EcE24377A_4231 - beta-glucoside-specific PTS system components IIABC 4033 43.18 -1 4221600..4221731 + 43 157156483 - EcE24377A_4232 - hypothetical protein 4034 42.77 -1 4222500..4223336 - 278 157156505 - EcE24377A_4233 - transcriptional antiterminator BglG 4035 33.33 -2 4223402..4223524 + 40 157159406 - EcE24377A_4234 - hypothetical protein 50.48 MEAN 5.64 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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