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Escherichia coli E24377A, complete genome - 1..4979619 4749 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3800 34.28 -2 3964303..3965148 + 281 157157739 - EcE24377A_3990 - hypothetical protein 3801 32.79 -2 3965343..3965525 + 60 157158425 - EcE24377A_3991 - hypothetical protein 3802 45.86 0 3965772..3966338 + 188 157157056 - EcE24377A_3992 - Slp family outer membrane lipoprotein 3803 39.74 -1 3966494..3967024 + 176 157157438 dctR EcE24377A_3993 - transcriptional regulator DctR 3804 45.68 0 3967066..3967713 - 215 157155965 - EcE24377A_3994 - putative Mg(2+) transport ATPase 3805 40.12 -1 3967777..3968115 - 112 157158063 hdeB EcE24377A_3995 - acid-resistance protein 3806 42.64 -1 3968219..3968551 - 110 157158855 hdeA EcE24377A_3996 - acid-resistance protein 3807 46.60 0 3968806..3969378 + 190 157159293 - EcE24377A_3997 - acid-resistance membrane protein 3808 32.95 -2 3970177..3970704 + 175 157157442 gadE EcE24377A_3998 - transcriptional regulator GadE 3809 54.58 0 3971043..3972200 + 385 157158536 mdtE EcE24377A_3999 - multidrug resistance efflux protein MdtE 3810 52.95 0 3972225..3975338 + 1037 157156681 mdtF EcE24377A_4000 - multidrug resistance protein MdtF 3811 41.70 -1 3975701..3976429 - 242 157157215 gadW EcE24377A_4001 - transcriptional regulator GadW 3812 32.41 -2 3976502..3976609 - 35 157155338 - EcE24377A_4002 - hypothetical protein 3813 41.21 -1 3976797..3977621 - 274 157157443 gadX EcE24377A_4003 - DNA-binding transcriptional regulator GadX 3814 37.25 -2 3977273..3977425 + 50 157155719 - EcE24377A_4004 - hypothetical protein 3815 54.03 0 3977991..3979391 - 466 157158967 gadA EcE24377A_4005 - glutamate decarboxylase 3816 53.70 0 3981403..3983052 + 549 157154859 treF EcE24377A_4007 - trehalase 3817 47.93 0 3983103..3983705 - 200 157155556 - EcE24377A_4008 - LuxR family transcriptional regulator 3818 53.67 0 3984225..3985124 + 299 157157897 - EcE24377A_4009 - LysR family transcriptional regulator 3819 53.16 0 3985173..3986186 + 337 157157396 - EcE24377A_4010 - putative ribonuclease 3820 56.01 0 3986597..3987919 + 440 157156887 - EcE24377A_4011 - MFS transporter, metabolite:H+ symporter (MHS) family protein 3821 53.32 0 3988153..3990213 - 686 157156366 - EcE24377A_4012 - AsmA family protein 3822 52.99 0 3990283..3991050 - 255 157155034 - EcE24377A_4013 - EAL domain-containing protein 3823 56.88 +1 3991282..3992211 + 309 157157550 kdgK EcE24377A_4014 - 2-dehydro-3-deoxygluconokinase 3824 54.04 0 3992307..3993803 - 498 157156623 - EcE24377A_4015 - M16 family peptidase 3825 51.83 0 3994024..3995310 - 428 157156520 dctA EcE24377A_4016 - C4-dicarboxylate transporter DctA 3826 52.51 0 3995493..3997448 - 651 157155547 - EcE24377A_4017 - putative phosphodiesterase 3827 57.52 +1 3997563..4000985 - 1140 157154865 bcsC EcE24377A_4018 - cellulose synthase subunit BcsC 3828 54.64 0 4001018..4002115 - 365 157156981 bcsZ EcE24377A_4019 - endo-1,4-D-glucanase 3829 54.96 0 4002131..4004470 - 779 157156498 bcsB EcE24377A_4020 - cellulose synthase regulator protein 3830 55.29 0 4004481..4007099 - 872 157155670 bcsA EcE24377A_4021 - cellulose synthase catalytic subunit 3831 53.78 0 4007096..4007848 - 250 157155125 - EcE24377A_4022 - cell division protein 3832 46.03 0 4007860..4008048 - 62 157158461 - EcE24377A_4023 - hypothetical protein 3833 49.20 0 4008387..4009892 + 501 157156797 - EcE24377A_4024 - hypothetical protein 3834 48.44 0 4009889..4010080 + 63 157156763 bcsF EcE24377A_4025 - cellulose biosynthesis protein BcsF 3835 52.50 0 4010077..4011756 + 559 157157989 - EcE24377A_4026 - hypothetical protein 3836 55.56 0 4012212..4012319 - 35 157157448 - EcE24377A_4027 - hypothetical protein 3837 51.44 0 4012326..4012568 - 80 157159368 - EcE24377A_4028 - hypothetical protein 3838 48.15 0 4013081..4013242 - 53 157158864 - EcE24377A_4030 - hypothetical protein 3839 45.20 0 4013392..4014663 + 423 157155310 - EcE24377A_4031 - serine transporter family protein 3840 55.52 0 4014693..4015697 - 334 157154821 dppF EcE24377A_4032 - dipeptide transporter ATP-binding subunit 3841 56.50 +1 4015694..4016677 - 327 157158362 dppD EcE24377A_4033 - dipeptide transporter ATP-binding subunit 3842 59.14 +1 4016688..4017590 - 300 157158176 dppC EcE24377A_4034 - dipeptide transporter 3843 56.37 +1 4017600..4018619 - 339 157158002 dppB EcE24377A_4035 - dipeptide transporter permease DppB 3844 51.74 0 4018927..4020534 - 535 157159059 dppA EcE24377A_4037 - dipeptide ABC transporter, periplasmic dipeptide-binding protein 3845 37.82 -2 4020723..4020878 + 51 157158337 - EcE24377A_4038 - hypothetical protein 3846 55.05 0 4021378..4022358 + 326 157154744 - EcE24377A_4039 - IS621, transposase 3847 50.53 0 4022894..4024585 - 563 157155176 - EcE24377A_4041 - phosphoethanolamine transferase 3848 51.28 0 4024909..4026117 - 402 157156915 - EcE24377A_4042 - major facilitator family transporter 3849 50.07 0 4026346..4027044 - 232 157156251 - EcE24377A_4043 - hypothetical protein 3850 50.00 0 4027202..4027765 + 187 157158800 tag EcE24377A_4044 - 3-methyl-adenine DNA glycosylase I 3851 52.15 0 4027762..4028202 + 146 157158159 - EcE24377A_4046 - hypothetical protein 3852 54.58 0 4028171..4030504 - 777 157157784 bisC EcE24377A_4045 - biotin sulfoxide reductase 3853 57.88 +1 4030657..4031316 + 219 157158823 - EcE24377A_4047 - putative outer membrane lipoprotein 3854 44.44 -1 4031332..4031457 + 41 157159315 - EcE24377A_4048 - hypothetical protein 3855 51.90 0 4031420..4032394 + 324 157155889 tkrA EcE24377A_4049 - 2-ketogluconate reductase 3856 50.07 0 4032444..4033154 - 236 157158777 - EcE24377A_4050 - putative lipoprotein 3857 44.33 -1 4033588..4033878 + 96 157154791 - EcE24377A_4051 - putative transcriptional regulator 3858 48.83 0 4034159..4034371 + 70 157155319 - EcE24377A_4052 - major cold shock protein 3859 34.64 -2 4034559..4034711 - 50 157157721 hokA EcE24377A_4053 - small toxic polypeptide 3860 55.70 0 4035037..4037106 - 689 157156177 glyS EcE24377A_4054 - glycyl-tRNA synthetase subunit beta 3861 55.92 0 4037116..4038027 - 303 157159336 glyQ EcE24377A_4055 - glycyl-tRNA synthetase subunit alpha 3862 47.67 0 4038122..4038421 - 99 157158831 - EcE24377A_4056 - hypothetical protein 3863 46.89 0 4038596..4039591 + 331 157155350 - EcE24377A_4057 - acyltransferase family protein 3864 41.55 -1 4039633..4040070 - 145 157154845 - EcE24377A_4058 - hypothetical protein 3865 40.94 -1 4040116..4040457 - 113 157156182 - EcE24377A_4059 - hypothetical protein 3866 54.16 0 4040626..4042080 - 484 157155057 xylB EcE24377A_4060 - xylulokinase 3867 50.64 0 4042152..4043474 - 440 157157106 xylA EcE24377A_4061 - xylose isomerase 3868 43.81 -1 4043840..4044832 + 330 157156386 xylF EcE24377A_4062 - D-xylose transporter subunit XylF 3869 47.28 0 4044910..4046451 + 513 157158341 xylG EcE24377A_4063 - xylose transporter ATP-binding subunit 3870 53.64 0 4046429..4047610 + 393 157158260 xylH EcE24377A_4064 - D-xylose ABC transporter, permease protein 3871 48.69 0 4047688..4048866 + 392 157155828 xylR EcE24377A_4065 - xylose operon regulatory protein 3872 47.52 0 4048974..4049798 - 274 157155273 bax EcE24377A_4066 - hypothetical protein 3873 52.63 0 4050118..4052148 + 676 157158372 malS EcE24377A_4068 - periplasmic alpha-amylase precursor 3874 52.39 0 4052326..4053579 + 417 157156349 - EcE24377A_4069 - valine--pyruvate transaminase 3875 53.80 0 4053730..4054203 - 157 157157371 - EcE24377A_4070 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 3876 52.77 0 4054305..4055117 - 270 157156720 - EcE24377A_4071 - IclR family transcriptional regulator 3877 53.35 0 4055354..4056352 + 332 157156962 dlgD EcE24377A_4072 - 2,3-diketo-L-gulonate reductase 3878 45.30 0 4056364..4056831 + 155 157158283 - EcE24377A_4073 - hypothetical protein 3879 43.88 -1 4056949..4057422 + 157 157155519 - EcE24377A_4074 - 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM 3880 50.86 0 4057425..4058702 + 425 157158213 - EcE24377A_4075 - TRAP transporter DctM family protein 3881 51.17 0 4058715..4059701 + 328 157157642 yiaO EcE24377A_4076 - TRAP transporter solute receptor DctP family protein 3882 57.31 +1 4059705..4061201 + 498 157159228 lyx EcE24377A_4077 - cryptic L-xylulose kinase 3883 57.92 +1 4061198..4061860 + 220 157158725 sgbH EcE24377A_4078 - 3-keto-L-gulonate-6-phosphate decarboxylase 3884 55.52 0 4061853..4062713 + 286 157154976 - EcE24377A_4079 - putative L-xylulose 5-phosphate 3-epimerase 3885 57.61 +1 4062707..4063402 + 231 157159253 sgbE EcE24377A_4080 - L-ribulose-5-phosphate 4-epimerase 3886 49.26 0 4063749..4064489 - 246 157155960 - EcE24377A_4081 - MltA-interacting protein MipA 3887 47.38 0 4064613..4065587 + 324 157155429 - EcE24377A_4083 - LysR family transcriptional regulator 3888 50.92 0 4065584..4066720 - 378 157156525 - EcE24377A_4082 - membrane fusion protein family protein 3889 45.37 0 4066726..4067049 - 107 157157037 - EcE24377A_4084 - hypothetical protein 3890 41.31 -1 4067163..4067375 + 70 157158282 - EcE24377A_4085 - hypothetical protein 3891 55.30 0 4067594..4069132 - 512 157159129 aldB EcE24377A_4086 - aldehyde dehydrogenase B 3892 50.00 0 4069297..4070448 - 383 157154897 adhB EcE24377A_4087 - putative alcohol dehydrogenase 3893 56.59 +1 4070638..4072482 - 614 157155659 selB EcE24377A_4088 - selenocysteinyl-tRNA-specific translation factor 3894 55.89 0 4072479..4073870 - 463 157156233 selA EcE24377A_4089 - selenocysteine synthase 3895 52.55 0 4073968..4074576 - 202 157156960 - EcE24377A_4090 - predicted glutathione S-transferase 3896 34.72 -2 4074575..4074718 + 47 157157872 - EcE24377A_4091 - hypothetical protein 3897 58.97 +1 4074805..4079040 + 1411 157156193 - EcE24377A_4092 - protein rhsB precursor 3898 33.69 -2 4079500..4080342 + 280 157158173 - EcE24377A_4093 - hypothetical protein 3899 47.94 0 4080384..4081328 + 314 157156060 - EcE24377A_4094 - RHS domain-containing protein 50.48 MEAN 5.64 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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