version 1.0
Escherichia coli E24377A, complete genome - 1..4979619 4749 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3511 52.16 0 3684272..3685126 + 284 157156385 - EcE24377A_3693 - hypothetical protein 3512 49.08 0 3685123..3685395 + 90 157156736 ptsO EcE24377A_3694 - phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) 3513 50.87 0 3685609..3686241 + 210 157157272 - EcE24377A_3696 - hypothetical protein 3514 51.85 0 3686238..3686966 - 242 157158590 mtgA EcE24377A_3695 - monofunctional biosynthetic peptidoglycan transglycosylase 3515 52.91 0 3686963..3687616 - 217 157159096 elbB EcE24377A_3697 - isoprenoid biosynthesis protein with amidotransferase-like domain 3516 50.71 0 3687846..3690182 - 778 157159325 arcB EcE24377A_3698 - aerobic respiration control sensor protein ArcB 3517 55.91 0 3690278..3691207 - 309 157156653 - EcE24377A_3699 - radical SAM family protein 3518 56.89 +1 3691882..3696342 + 1486 157158022 gltB EcE24377A_3700 - glutamate synthase subunit alpha 3519 55.60 0 3696355..3697773 + 472 157158812 gltD EcE24377A_3701 - glutamate synthase subunit beta 3520 48.94 0 3697957..3699084 + 375 157159171 - EcE24377A_3702 - hypothetical protein 3521 47.31 0 3699144..3699608 - 154 157155045 - EcE24377A_3703 - hypothetical protein 3522 59.59 +1 3699605..3700480 - 291 157155309 - EcE24377A_3704 - N-acetylmannosamine kinase 3523 57.83 +1 3700477..3701166 - 229 157156142 - EcE24377A_3705 - N-acetylmannosamine-6-phosphate 2-epimerase 3524 55.47 0 3701214..3702704 - 496 157157675 nanT1 EcE24377A_3706 - putative sialic acid transporter 3525 51.90 0 3702813..3703706 - 297 157158110 nanA EcE24377A_3707 - N-acetylneuraminate lyase 3526 52.49 0 3703828..3704610 - 260 157157774 nanR EcE24377A_3708 - transcriptional regulator NanR 3527 50.87 0 3704999..3706321 + 440 157155112 - EcE24377A_3709 - putative cryptic C4-dicarboxylate transporter DcuD 3528 48.89 0 3706296..3706430 + 44 157156406 - EcE24377A_3711 - hypothetical protein 3529 55.02 0 3706364..3706861 - 165 157157016 sspB EcE24377A_3710 - ClpXP protease specificity-enhancing factor 3530 53.68 0 3706867..3707505 - 212 157158762 sspA EcE24377A_3712 - stringent starvation protein A 3531 52.16 0 3707900..3708292 - 130 157157775 rpsI EcE24377A_3713 - 30S ribosomal protein S9 3532 50.58 0 3708308..3708736 - 142 157154937 rplM EcE24377A_3714 - 50S ribosomal protein L13 3533 51.86 0 3708955..3710082 - 375 157159011 - EcE24377A_3715 - AFG1 family ATPase 3534 54.39 0 3710276..3710674 + 132 157156704 - EcE24377A_3716 - cytochrome d ubiquinol oxidase subunit III 3535 52.12 0 3710828..3712195 + 455 157156170 degQ EcE24377A_3717 - serine endoprotease 3536 52.53 0 3712285..3713352 + 355 157157456 degS EcE24377A_3718 - serine endoprotease 3537 52.18 0 3713414..3714352 - 312 157155698 mdh EcE24377A_3719 - malate dehydrogenase 3538 48.41 0 3714787..3715257 + 156 157158570 argR EcE24377A_3720 - arginine repressor 3539 48.48 0 3715622..3715885 + 87 157159141 ycfR EcE24377A_3721 - protein YcfR 3540 42.49 -1 3715941..3716213 - 90 157156620 - EcE24377A_3722 - hypothetical protein 3541 52.79 0 3716305..3718272 - 655 157156987 aaeB EcE24377A_3723 - p-hydroxybenzoic acid efflux subunit AaeB 3542 53.70 0 3718278..3719210 - 310 157155237 aaeA EcE24377A_3724 - p-hydroxybenzoic acid efflux subunit AaeA 3543 47.62 0 3719218..3719490 - 90 157156323 aaeX EcE24377A_3725 - hypothetical protein 3544 52.69 0 3719604..3720533 + 309 157158690 aaeR EcE24377A_3726 - putative DNA-binding transcriptional regulator 3545 54.63 0 3720661..3722106 - 481 157159207 tldD EcE24377A_3727 - protease TldD 3546 53.38 0 3722262..3726062 - 1266 157157619 - EcE24377A_3728 - hypothetical protein 3547 52.24 0 3726130..3727599 - 489 157159301 cafA EcE24377A_3729 - ribonuclease G 3548 54.04 0 3727589..3728182 - 197 157158373 maf1 EcE24377A_3730 - Maf-like protein 3549 50.92 0 3728191..3728679 - 162 157155778 lytS EcE24377A_3731 - rod shape-determining protein MreD 3550 55.89 0 3728679..3729782 - 367 157156676 mreC EcE24377A_3733 - cell wall structural complex MreBCD transmembrane component MreC 3551 54.50 0 3729848..3730891 - 347 157158081 mreB EcE24377A_3734 - rod shape-determining protein MreB 3552 48.68 0 3730999..3731187 + 62 157157440 - EcE24377A_3735 - hypothetical protein 3553 50.49 0 3731196..3733136 - 646 157159387 - EcE24377A_3736 - regulatory protein CsrD 3554 55.08 0 3733288..3734262 + 324 157158862 - EcE24377A_3737 - quinone oxidoreductase 3555 51.80 0 3735240..3735710 + 156 157158042 accB EcE24377A_3739 - acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 3556 53.33 0 3735721..3737070 + 449 157157399 accC EcE24377A_3740 - acetyl-CoA carboxylase biotin carboxylase subunit 3557 55.14 0 3737179..3737421 + 80 157159070 - EcE24377A_3741 - hypothetical protein 3558 54.41 0 3737411..3738862 + 483 157155341 panF EcE24377A_3742 - sodium/panthothenate symporter 3559 54.54 0 3738874..3739755 + 293 157155833 prmA EcE24377A_3743 - ribosomal protein L11 methyltransferase 3560 27.96 -2 3739820..3739912 + 30 157156693 - EcE24377A_3744 - hypothetical protein 3561 52.17 0 3740084..3741049 + 321 157156175 dusB EcE24377A_3745 - tRNA-dihydrouridine synthase B 3562 47.14 0 3741075..3741371 + 98 157158082 fis EcE24377A_3746 - DNA-binding protein Fis 3563 48.02 0 3741457..3742341 + 294 157157471 - EcE24377A_3747 - putative methyltransferase 3564 41.06 -1 3742398..3742604 + 68 157159436 - EcE24377A_3748 - hypothetical protein 3565 44.04 -1 3742607..3743269 - 220 157158036 - EcE24377A_3749 - DNA-binding transcriptional regulator EnvR 3566 52.42 0 3743668..3744825 + 385 157155709 acrE EcE24377A_3750 - acriflavine resistance protein E 3567 51.30 0 3744837..3747941 + 1034 157155020 acrF EcE24377A_3751 - acriflavine resistance protein F 3568 54.95 0 3748194..3748415 + 73 157158583 - EcE24377A_3752 - putative lipoprotein 3569 46.33 0 3748641..3748817 + 58 157155506 - EcE24377A_3753 - hypothetical protein 3570 50.00 0 3748846..3749871 + 341 157159268 - EcE24377A_3754 - amino acid ABC transporter, periplasmic amino acid-binding protein 3571 50.17 0 3749939..3751120 + 393 157158458 - EcE24377A_3755 - His/Glu/Gln/Arg/opine ABC transporter permease 3572 52.08 0 3751130..3752233 + 367 157158180 - EcE24377A_3756 - His/Glu/Gln/Arg/opine ABC transporter permease 3573 47.30 0 3752241..3752999 + 252 157157435 - EcE24377A_3757 - amino acid ABC transporter, ATP-binding protein 3574 45.92 0 3758722..3759603 + 293 157159463 - EcE24377A_3763 - hypothetical protein 3575 48.06 0 3759579..3759836 - 85 157156190 - EcE24377A_3762 - hypothetical protein 3576 48.96 0 3759833..3760651 - 272 157157510 aroE EcE24377A_3764 - shikimate 5-dehydrogenase 3577 52.59 0 3760656..3761273 - 205 157154846 - EcE24377A_3765 - putative ribosome maturation factor 3578 49.91 0 3761233..3761775 - 180 157155337 - EcE24377A_3766 - topoisomerase DNA-binding C4 zinc finger domain-containing protein 3579 45.78 0 3761804..3762277 - 157 157156173 smg EcE24377A_3767 - hypothetical protein 3580 51.02 0 3762249..3763373 - 374 157156735 dprA EcE24377A_3768 - hypothetical protein 3581 46.47 0 3763503..3764012 + 169 157156138 def1 EcE24377A_3769 - peptide deformylase 3582 52.85 0 3764027..3764974 + 315 157156687 fmt EcE24377A_3770 - methionyl-tRNA formyltransferase 3583 50.16 0 3765020..3766309 + 429 157157639 rsmB EcE24377A_3771 - 16S rRNA methyltransferase B 3584 50.40 0 3766331..3767707 + 458 157159217 trkA EcE24377A_3772 - potassium transporter peripheral membrane component 3585 45.01 0 3767837..3768247 + 136 157154868 mscL EcE24377A_3774 - large-conductance mechanosensitive channel 3586 42.92 -1 3768244..3768462 - 72 157156652 - EcE24377A_3773 - hypothetical protein 3587 49.77 0 3768518..3768943 - 141 157159430 zntR EcE24377A_3775 - zinc-responsive transcriptional regulator 3588 47.43 0 3768954..3769322 - 122 157158769 - EcE24377A_3776 - hypothetical protein 3589 53.65 0 3769429..3769812 - 127 157158062 rplQ EcE24377A_3777 - 50S ribosomal protein L17 3590 52.12 0 3769853..3770842 - 329 157157450 rpoA EcE24377A_3778 - DNA-directed RNA polymerase subunit alpha 3591 50.72 0 3770868..3771488 - 206 157156792 rpsD EcE24377A_3779 - 30S ribosomal protein S4 3592 51.28 0 3771522..3771911 - 129 157156126 rpsK EcE24377A_3780 - 30S ribosomal protein S11 3593 51.82 0 3771928..3772284 - 118 157156782 rpsM EcE24377A_3781 - 30S ribosomal protein S13 3594 47.86 0 3772431..3772547 - 38 157155446 rpmJ1 EcE24377A_3782 - 50S ribosomal protein L36 3595 49.47 0 3772579..3773910 - 443 157158750 secY EcE24377A_3783 - preprotein translocase subunit SecY 3596 53.56 0 3773918..3774352 - 144 157157035 rplO EcE24377A_3784 - 50S ribosomal protein L15 3597 50.00 0 3774356..3774535 - 59 157156512 rpmD EcE24377A_3785 - 50S ribosomal protein L30 3598 50.00 0 3774539..3775042 - 167 157155673 rpsE EcE24377A_3786 - 30S ribosomal protein S5 3599 53.67 0 3775057..3775410 - 117 157158906 rplR EcE24377A_3787 - 50S ribosomal protein L18 3600 52.06 0 3775420..3775953 - 177 157158568 rplF EcE24377A_3788 - 50S ribosomal protein L6 3601 50.13 0 3775966..3776358 - 130 157157108 rpsH EcE24377A_3789 - 30S ribosomal protein S8 3602 52.61 0 3776392..3776697 - 101 157158065 rpsN EcE24377A_3790 - 30S ribosomal protein S14 3603 49.81 0 3776712..3777251 - 179 157158313 rplE EcE24377A_3791 - 50S ribosomal protein L5 3604 46.35 0 3777266..3777580 - 104 157159126 rplX EcE24377A_3792 - 50S ribosomal protein L24 3605 51.08 0 3777591..3777962 - 123 157155839 rplN EcE24377A_3793 - 50S ribosomal protein L14 3606 47.45 0 3778127..3778381 - 84 157156252 rpsQ EcE24377A_3794 - 30S ribosomal protein S17 3607 54.17 0 3778381..3778572 - 63 157157167 rpmC EcE24377A_3795 - 50S ribosomal protein L29 3608 51.82 0 3778572..3778982 - 136 157157561 rplP EcE24377A_3796 - 50S ribosomal protein L16 3609 51.00 0 3778995..3779696 - 233 157157923 rpsC EcE24377A_3797 - 30S ribosomal protein S3 3610 49.85 0 3779714..3780046 - 110 157155565 rplV EcE24377A_3798 - 50S ribosomal protein L22 50.48 MEAN 5.64 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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