version 1.0
Escherichia coli E24377A, complete genome - 1..4979619 4749 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3486 52.51 0 3667740..3668912 - 390 157155525 - EcE24377A_3668 - GTPase ObgE 3487 52.69 0 3668928..3669893 - 321 157157359 - EcE24377A_3669 - putative transporter 3488 50.00 0 3670020..3670277 - 85 157157764 rpmA EcE24377A_3670 - 50S ribosomal protein L27 3489 44.87 0 3670271..3670816 + 181 157159423 - EcE24377A_3672 - hypothetical protein 3490 48.40 0 3670298..3670609 - 103 157158786 rplU EcE24377A_3671 - 50S ribosomal protein L21 3491 52.78 0 3670868..3671839 + 323 157155105 ispB EcE24377A_3673 - octaprenyl diphosphate synthase 3492 50.54 0 3672066..3672344 + 92 157155714 sfsB EcE24377A_3674 - DNA-binding transcriptional regulator Nlp 3493 53.33 0 3672392..3673651 - 419 157155579 murA EcE24377A_3675 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3494 50.37 0 3673706..3673975 - 89 157155993 - EcE24377A_3676 - BolA/YrbA family protein 3495 48.25 0 3673772..3674113 + 113 157156647 - EcE24377A_3677 - hypothetical protein 3496 53.40 0 3674120..3674413 - 97 157157685 yrbB EcE24377A_3678 - YrbB 3497 53.14 0 3674401..3675036 + 211 157155371 - EcE24377A_3680 - hypothetical protein 3498 52.52 0 3674413..3675048 - 211 157154788 ttg2D EcE24377A_3679 - toluene tolerance protein Ttg2D 3499 49.82 0 3675067..3675618 - 183 157156204 - EcE24377A_3681 - Mce family protein 3500 55.17 0 3675623..3676405 - 260 157156689 - EcE24377A_3682 - toluene ABC transporter, permease protein 3501 54.57 0 3676413..3677222 - 269 157157540 - EcE24377A_3683 - putative ABC transporter ATP-binding protein YrbF 3502 51.74 0 3677432..3678409 + 325 157158033 - EcE24377A_3684 - putative calcium/sodium:proton antiporter 3503 52.28 0 3678423..3679409 + 328 157158811 kdsD EcE24377A_3685 - D-arabinose 5-phosphate isomerase 3504 52.56 0 3679430..3679996 + 188 157159366 kdsC EcE24377A_3686 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 3505 46.35 0 3679993..3680568 + 191 157155458 - EcE24377A_3687 - hypothetical protein 3506 49.64 0 3680537..3681094 + 185 157156158 lptA EcE24377A_3688 - hypothetical protein 3507 54.13 0 3681101..3681826 + 241 157158469 lptB EcE24377A_3689 - putative ABC transporter ATP-binding protein YhbG 3508 52.72 0 3681874..3683307 + 477 157158873 rpoN EcE24377A_3690 - RNA polymerase factor sigma-54 3509 44.79 -1 3683330..3683617 + 95 157159184 yfiA EcE24377A_3691 - putative sigma(54) modulation protein 3510 51.63 0 3683735..3684226 + 163 157155389 ptsN EcE24377A_3692 - sugar-specific enzyme IIA component of PTS 3511 52.16 0 3684272..3685126 + 284 157156385 - EcE24377A_3693 - hypothetical protein 3512 49.08 0 3685123..3685395 + 90 157156736 ptsO EcE24377A_3694 - phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) 3513 50.87 0 3685609..3686241 + 210 157157272 - EcE24377A_3696 - hypothetical protein 3514 51.85 0 3686238..3686966 - 242 157158590 mtgA EcE24377A_3695 - monofunctional biosynthetic peptidoglycan transglycosylase 3515 52.91 0 3686963..3687616 - 217 157159096 elbB EcE24377A_3697 - isoprenoid biosynthesis protein with amidotransferase-like domain 3516 50.71 0 3687846..3690182 - 778 157159325 arcB EcE24377A_3698 - aerobic respiration control sensor protein ArcB 3517 55.91 0 3690278..3691207 - 309 157156653 - EcE24377A_3699 - radical SAM family protein 3518 56.89 +1 3691882..3696342 + 1486 157158022 gltB EcE24377A_3700 - glutamate synthase subunit alpha 3519 55.60 0 3696355..3697773 + 472 157158812 gltD EcE24377A_3701 - glutamate synthase subunit beta 3520 48.94 0 3697957..3699084 + 375 157159171 - EcE24377A_3702 - hypothetical protein 3521 47.31 0 3699144..3699608 - 154 157155045 - EcE24377A_3703 - hypothetical protein 3522 59.59 +1 3699605..3700480 - 291 157155309 - EcE24377A_3704 - N-acetylmannosamine kinase 3523 57.83 +1 3700477..3701166 - 229 157156142 - EcE24377A_3705 - N-acetylmannosamine-6-phosphate 2-epimerase 3524 55.47 0 3701214..3702704 - 496 157157675 nanT1 EcE24377A_3706 - putative sialic acid transporter 3525 51.90 0 3702813..3703706 - 297 157158110 nanA EcE24377A_3707 - N-acetylneuraminate lyase 3526 52.49 0 3703828..3704610 - 260 157157774 nanR EcE24377A_3708 - transcriptional regulator NanR 3527 50.87 0 3704999..3706321 + 440 157155112 - EcE24377A_3709 - putative cryptic C4-dicarboxylate transporter DcuD 3528 48.89 0 3706296..3706430 + 44 157156406 - EcE24377A_3711 - hypothetical protein 3529 55.02 0 3706364..3706861 - 165 157157016 sspB EcE24377A_3710 - ClpXP protease specificity-enhancing factor 3530 53.68 0 3706867..3707505 - 212 157158762 sspA EcE24377A_3712 - stringent starvation protein A 3531 52.16 0 3707900..3708292 - 130 157157775 rpsI EcE24377A_3713 - 30S ribosomal protein S9 3532 50.58 0 3708308..3708736 - 142 157154937 rplM EcE24377A_3714 - 50S ribosomal protein L13 3533 51.86 0 3708955..3710082 - 375 157159011 - EcE24377A_3715 - AFG1 family ATPase 3534 54.39 0 3710276..3710674 + 132 157156704 - EcE24377A_3716 - cytochrome d ubiquinol oxidase subunit III 3535 52.12 0 3710828..3712195 + 455 157156170 degQ EcE24377A_3717 - serine endoprotease 3536 52.53 0 3712285..3713352 + 355 157157456 degS EcE24377A_3718 - serine endoprotease 3537 52.18 0 3713414..3714352 - 312 157155698 mdh EcE24377A_3719 - malate dehydrogenase 3538 48.41 0 3714787..3715257 + 156 157158570 argR EcE24377A_3720 - arginine repressor 3539 48.48 0 3715622..3715885 + 87 157159141 ycfR EcE24377A_3721 - protein YcfR 3540 42.49 -1 3715941..3716213 - 90 157156620 - EcE24377A_3722 - hypothetical protein 3541 52.79 0 3716305..3718272 - 655 157156987 aaeB EcE24377A_3723 - p-hydroxybenzoic acid efflux subunit AaeB 3542 53.70 0 3718278..3719210 - 310 157155237 aaeA EcE24377A_3724 - p-hydroxybenzoic acid efflux subunit AaeA 3543 47.62 0 3719218..3719490 - 90 157156323 aaeX EcE24377A_3725 - hypothetical protein 3544 52.69 0 3719604..3720533 + 309 157158690 aaeR EcE24377A_3726 - putative DNA-binding transcriptional regulator 3545 54.63 0 3720661..3722106 - 481 157159207 tldD EcE24377A_3727 - protease TldD 3546 53.38 0 3722262..3726062 - 1266 157157619 - EcE24377A_3728 - hypothetical protein 3547 52.24 0 3726130..3727599 - 489 157159301 cafA EcE24377A_3729 - ribonuclease G 3548 54.04 0 3727589..3728182 - 197 157158373 maf1 EcE24377A_3730 - Maf-like protein 3549 50.92 0 3728191..3728679 - 162 157155778 lytS EcE24377A_3731 - rod shape-determining protein MreD 3550 55.89 0 3728679..3729782 - 367 157156676 mreC EcE24377A_3733 - cell wall structural complex MreBCD transmembrane component MreC 3551 54.50 0 3729848..3730891 - 347 157158081 mreB EcE24377A_3734 - rod shape-determining protein MreB 3552 48.68 0 3730999..3731187 + 62 157157440 - EcE24377A_3735 - hypothetical protein 3553 50.49 0 3731196..3733136 - 646 157159387 - EcE24377A_3736 - regulatory protein CsrD 3554 55.08 0 3733288..3734262 + 324 157158862 - EcE24377A_3737 - quinone oxidoreductase 3555 51.80 0 3735240..3735710 + 156 157158042 accB EcE24377A_3739 - acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 3556 53.33 0 3735721..3737070 + 449 157157399 accC EcE24377A_3740 - acetyl-CoA carboxylase biotin carboxylase subunit 3557 55.14 0 3737179..3737421 + 80 157159070 - EcE24377A_3741 - hypothetical protein 3558 54.41 0 3737411..3738862 + 483 157155341 panF EcE24377A_3742 - sodium/panthothenate symporter 3559 54.54 0 3738874..3739755 + 293 157155833 prmA EcE24377A_3743 - ribosomal protein L11 methyltransferase 3560 27.96 -2 3739820..3739912 + 30 157156693 - EcE24377A_3744 - hypothetical protein 3561 52.17 0 3740084..3741049 + 321 157156175 dusB EcE24377A_3745 - tRNA-dihydrouridine synthase B 3562 47.14 0 3741075..3741371 + 98 157158082 fis EcE24377A_3746 - DNA-binding protein Fis 3563 48.02 0 3741457..3742341 + 294 157157471 - EcE24377A_3747 - putative methyltransferase 3564 41.06 -1 3742398..3742604 + 68 157159436 - EcE24377A_3748 - hypothetical protein 3565 44.04 -1 3742607..3743269 - 220 157158036 - EcE24377A_3749 - DNA-binding transcriptional regulator EnvR 3566 52.42 0 3743668..3744825 + 385 157155709 acrE EcE24377A_3750 - acriflavine resistance protein E 3567 51.30 0 3744837..3747941 + 1034 157155020 acrF EcE24377A_3751 - acriflavine resistance protein F 3568 54.95 0 3748194..3748415 + 73 157158583 - EcE24377A_3752 - putative lipoprotein 3569 46.33 0 3748641..3748817 + 58 157155506 - EcE24377A_3753 - hypothetical protein 3570 50.00 0 3748846..3749871 + 341 157159268 - EcE24377A_3754 - amino acid ABC transporter, periplasmic amino acid-binding protein 3571 50.17 0 3749939..3751120 + 393 157158458 - EcE24377A_3755 - His/Glu/Gln/Arg/opine ABC transporter permease 3572 52.08 0 3751130..3752233 + 367 157158180 - EcE24377A_3756 - His/Glu/Gln/Arg/opine ABC transporter permease 3573 47.30 0 3752241..3752999 + 252 157157435 - EcE24377A_3757 - amino acid ABC transporter, ATP-binding protein 3574 45.92 0 3758722..3759603 + 293 157159463 - EcE24377A_3763 - hypothetical protein 3575 48.06 0 3759579..3759836 - 85 157156190 - EcE24377A_3762 - hypothetical protein 3576 48.96 0 3759833..3760651 - 272 157157510 aroE EcE24377A_3764 - shikimate 5-dehydrogenase 3577 52.59 0 3760656..3761273 - 205 157154846 - EcE24377A_3765 - putative ribosome maturation factor 3578 49.91 0 3761233..3761775 - 180 157155337 - EcE24377A_3766 - topoisomerase DNA-binding C4 zinc finger domain-containing protein 3579 45.78 0 3761804..3762277 - 157 157156173 smg EcE24377A_3767 - hypothetical protein 3580 51.02 0 3762249..3763373 - 374 157156735 dprA EcE24377A_3768 - hypothetical protein 3581 46.47 0 3763503..3764012 + 169 157156138 def1 EcE24377A_3769 - peptide deformylase 3582 52.85 0 3764027..3764974 + 315 157156687 fmt EcE24377A_3770 - methionyl-tRNA formyltransferase 3583 50.16 0 3765020..3766309 + 429 157157639 rsmB EcE24377A_3771 - 16S rRNA methyltransferase B 3584 50.40 0 3766331..3767707 + 458 157159217 trkA EcE24377A_3772 - potassium transporter peripheral membrane component 3585 45.01 0 3767837..3768247 + 136 157154868 mscL EcE24377A_3774 - large-conductance mechanosensitive channel 50.48 MEAN 5.64 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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