version 1.0
Escherichia coli E24377A, complete genome - 1..4979619 4749 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 305 50.35 0 348993..350420 + 475 157159192 - EcE24377A_0322 - iron-sulfur cluster binding protein 306 52.59 0 350413..351108 + 231 157158990 - EcE24377A_0323 - hypothetical protein 307 41.92 -1 351182..351379 - 65 157157674 - EcE24377A_0324 - hypothetical protein 308 37.07 -2 351351..352019 - 222 157155567 - EcE24377A_0325 - hypothetical protein 309 57.57 +1 352232..353902 - 556 157158516 betA EcE24377A_0326 - choline dehydrogenase 310 58.38 +1 353916..355388 - 490 157156812 betB EcE24377A_0327 - betaine aldehyde dehydrogenase 311 56.80 +1 355402..355989 - 195 157155650 betI EcE24377A_0328 - transcriptional regulator BetI 312 52.54 0 356127..356402 + 91 157156382 - EcE24377A_0329 - IS1, transposase orfA 313 54.76 0 356321..356824 + 167 157157054 - EcE24377A_0330 - IS1, transposase orfB 314 55.21 0 356894..358927 + 677 157158744 betT EcE24377A_0331 - choline transport protein BetT 315 49.60 0 359500..363483 + 1327 157158257 - EcE24377A_0332 - putative outer membrane autotransporter 316 46.10 0 363625..364713 + 362 157158021 - EcE24377A_0333 - LuxR-family transcriptional regulator 317 49.09 0 364755..365687 - 310 157156304 - EcE24377A_0334 - LysR family transcriptional regulator 318 52.81 0 365779..366276 - 165 157159229 - EcE24377A_0335 - hypothetical protein 319 38.46 -2 366353..366586 + 77 157157384 - EcE24377A_0336 - hypothetical protein 320 45.38 0 366534..367139 + 201 157155799 - EcE24377A_0337 - ankyrin repeat-containing protein 321 46.99 0 367179..368042 + 287 157158698 - EcE24377A_0338 - hypothetical protein 322 55.30 0 368032..369579 + 515 157154800 - EcE24377A_0339 - acyl-CoA synthetase 323 58.91 +1 369579..370997 + 472 157155327 - EcE24377A_0340 - hypothetical protein 324 57.10 +1 371140..372090 + 316 157157266 - EcE24377A_0341 - putative carbamate kinase 325 55.98 0 372238..373482 + 414 157155685 - EcE24377A_0342 - deaminase 326 43.54 -1 373751..374191 + 146 157157414 - EcE24377A_0343 - hypothetical protein 327 30.39 -2 374219..374320 - 33 157159464 - EcE24377A_0344 - hypothetical protein 328 47.97 0 374445..375428 + 327 157156551 - EcE24377A_0345 - sugar ABC transporter, periplasmic sugar-binding protein 329 51.18 0 375477..376961 + 494 157156018 - EcE24377A_0346 - sugar ABC transporter, ATP-binding protein 330 50.62 0 376954..377925 + 323 157156768 - EcE24377A_0347 - sugar ABC transporter, permease protein 331 51.31 0 377922..378878 + 318 157156045 - EcE24377A_0348 - sugar ABC transporter, permease protein 332 53.52 0 378965..380014 + 349 157155687 - EcE24377A_0349 - zinc-binding dehydrogenase family oxidoreductase 333 38.97 -2 380257..381072 + 271 157154994 - EcE24377A_0350 - hypothetical protein 334 50.46 0 381746..382393 - 215 157159412 - EcE24377A_0352 - putative homoserine/threonine efflux protein 335 39.49 -1 382564..382839 + 91 157156208 - EcE24377A_0353 - hypothetical protein 336 55.26 0 382937..384523 - 528 157159324 prpR EcE24377A_0354 - propionate catabolism operon regulatory protein PrpR 337 33.33 -2 384584..384682 + 32 157158609 - EcE24377A_0355 - hypothetical protein 338 56.23 +1 384761..385651 + 296 157158231 prpB EcE24377A_0356 - 2-methylisocitrate lyase 339 55.13 0 385696..386865 + 389 157157579 prpC EcE24377A_0357 - methylcitrate synthase 340 56.75 +1 386899..388350 + 483 157158262 prpD EcE24377A_0358 - 2-methylcitrate dehydratase 341 58.13 +1 388390..390276 + 628 157157602 prpE EcE24377A_0359 - propionyl-CoA synthetase 342 53.57 0 390513..391772 + 419 157156666 codB EcE24377A_0360 - cytosine permease 343 53.04 0 391762..393045 + 427 157156161 codA EcE24377A_0361 - cytosine deaminase 344 55.22 0 393085..393984 - 299 157155582 cynR EcE24377A_0362 - DNA-binding transcriptional regulator CynR 345 50.00 0 393907..394002 + 31 157155049 - EcE24377A_0363 - hypothetical protein 346 57.58 +1 394094..394753 + 219 157157076 cynT EcE24377A_0364 - carbonic anhydrase 347 52.02 0 394784..395254 + 156 157157752 cynS EcE24377A_0365 - cyanate hydratase 348 58.27 +1 395287..396441 + 384 157155715 cynX EcE24377A_0366 - putative cyanate transporter 349 46.25 0 396520..397773 - 417 157156415 lacY EcE24377A_0367 - galactoside permease 350 56.03 0 397825..400899 - 1024 157154977 lacZ EcE24377A_0368 - beta-D-galactosidase 351 55.86 0 401022..402113 - 363 157155643 lacI EcE24377A_0369 - lac repressor 352 53.59 0 402181..403128 - 315 157158422 mhpR EcE24377A_0370 - DNA-binding transcriptional activator MhpR 353 56.82 +1 403205..404869 + 554 157159034 mhpA EcE24377A_0371 - 3-(3-hydroxyphenyl)propionate hydroxylase 354 57.35 +1 404871..405815 + 314 157157662 mhpB EcE24377A_0372 - 3-(2,3-dihydroxyphenyl)propionate dioxygenase 355 54.20 0 405818..406699 + 293 157155601 mhpC EcE24377A_0373 - 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase 356 55.56 0 406709..407518 + 269 157156243 mhpD EcE24377A_0374 - 2-keto-4-pentenoate hydratase 357 54.89 0 407515..408465 + 316 157156149 mhpF EcE24377A_0375 - acetaldehyde dehydrogenase 358 56.31 +1 408462..409475 + 337 157155206 mhpE EcE24377A_0376 - 4-hydroxy-2-ketovalerate aldolase 359 56.93 +1 409651..410862 + 403 157155702 - EcE24377A_0377 - putative 3-hydroxyphenylpropionic transporter MhpT 360 47.96 0 410964..411503 + 179 157158343 - EcE24377A_0378 - hypothetical protein 361 60.19 +1 411525..411632 + 35 157159466 - EcE24377A_0379 - hypothetical protein 362 49.04 0 411729..412562 - 277 157157121 fghA1 EcE24377A_0380 - S-formylglutathione hydrolase 363 53.60 0 412655..413764 - 369 157155527 - EcE24377A_0381 - alcohol dehydrogenase class III 364 53.26 0 413799..414074 - 91 157158905 - EcE24377A_0382 - regulator protein FrmR 365 50.13 0 414260..415033 - 257 157156597 - EcE24377A_0383 - hypothetical protein 366 45.12 0 415035..415475 - 146 157157408 - EcE24377A_0384 - putative acyltransferase 367 49.71 0 415594..416790 - 398 157155529 - EcE24377A_0385 - glycosyl transferase, group 2 family protein 368 43.60 -1 416800..417471 - 223 157156377 - EcE24377A_0386 - putative GlcNAc-PI de-N-acetylase 369 22.22 -2 417643..417750 + 35 157158716 - EcE24377A_0387 - hypothetical protein 370 35.11 -2 417909..418133 - 74 157159237 - EcE24377A_0388 - hypothetical protein 371 55.87 0 418087..419049 + 320 157157826 tauA EcE24377A_0389 - taurine transporter substrate binding subunit 372 58.45 +1 419825..420652 + 275 157157564 tauC EcE24377A_0391 - taurine transporter subunit 373 54.11 0 420649..421500 + 283 157156427 tauD EcE24377A_0392 - taurine dioxygenase 374 54.15 0 421658..422632 - 324 157156861 hemB EcE24377A_0393 - delta-aminolevulinic acid dehydratase 375 55.19 0 423338..424243 - 301 157155082 - EcE24377A_0394 - insertion element IS2 transposase InsD 376 53.01 0 424201..424566 - 121 157154869 - EcE24377A_0395 - insertion sequence 2 OrfA protein 377 45.43 0 424630..427398 + 922 157157315 - EcE24377A_0396 - outer membrane autotransporter 378 39.74 -1 427486..428109 + 207 157158707 - EcE24377A_0397 - putative DNA-binding transcriptional regulator 379 54.92 0 428110..429267 - 385 157156874 ampH EcE24377A_0398 - beta-lactamase/D-alanine carboxypeptidase 380 41.18 -1 429313..429414 - 33 157157661 - EcE24377A_0399 - hypothetical protein 381 45.13 0 429405..429599 + 64 157155278 - EcE24377A_0400 - hypothetical protein 382 51.11 0 429619..430839 + 406 157156455 smbA EcE24377A_0401 - transport protein 383 53.42 0 430852..431946 + 364 157157309 - EcE24377A_0402 - putative lipoprotein 384 52.38 0 431947..432051 - 34 157158985 - EcE24377A_0403 - hypothetical protein 385 52.43 0 432005..432313 - 102 157158624 - EcE24377A_0404 - hypothetical protein 386 44.35 -1 432441..432785 + 114 157154885 - EcE24377A_0405 - hypothetical protein 387 51.14 0 432809..433903 - 364 157155036 ddlA EcE24377A_0406 - D-alanyl-alanine synthetase A 388 35.32 -2 433984..434184 + 66 157155189 - EcE24377A_0407 - hypothetical protein 389 29.82 -2 434207..434320 + 37 157156970 - EcE24377A_0408 - hypothetical protein 390 46.36 0 434366..434626 + 86 157157736 - EcE24377A_0409 - hypothetical protein 391 53.25 0 434727..436142 + 471 157156143 phoA EcE24377A_0410 - bacterial alkaline phosphatase 392 47.04 0 436261..436581 + 106 157157063 psiF EcE24377A_0411 - hypothetical protein 393 53.85 0 436683..437798 + 371 157157429 - EcE24377A_0412 - diguanylate cyclase AdrA 394 54.57 0 437815..438624 - 269 157157179 proC EcE24377A_0413 - pyrroline-5-carboxylate reductase 395 56.43 +1 438744..439202 + 152 157157816 - EcE24377A_0414 - hypothetical protein 396 51.81 0 439385..439909 + 174 157158472 aroL EcE24377A_0415 - shikimate kinase II 397 48.44 0 439959..440150 + 63 157159121 - EcE24377A_0416 - hypothetical protein 398 46.46 0 440408..441085 + 225 157155263 aroM EcE24377A_0417 - hypothetical protein 399 51.93 0 441157..441441 + 94 157155801 - EcE24377A_0418 - hypothetical protein 400 48.58 0 441649..441930 + 93 157155471 - EcE24377A_0419 - hypothetical protein 401 51.54 0 442088..442999 - 303 157156282 - EcE24377A_0420 - recombination associated protein 402 54.90 0 443124..444032 + 302 157155583 mak EcE24377A_0421 - fructokinase 403 54.61 0 444011..444151 + 46 157157314 - EcE24377A_0422 - hypothetical protein 404 50.20 0 444175..445443 - 422 157156635 araJ EcE24377A_0423 - protein AraJ 50.48 MEAN 5.64 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0