version 1.0
Escherichia coli E24377A, complete genome - 1..4979619 4749 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2355 54.41 0 2456118..2457104 + 328 157157928 - EcE24377A_2471 - CobW/P47K family protein 2356 44.26 -1 2457143..2457856 + 237 157158442 - EcE24377A_2472 - PAP2 family protein 2357 46.74 0 2458268..2458834 + 188 157156071 - EcE24377A_2473 - putative outer membrane lipoprotein 2358 50.55 0 2459015..2460571 + 518 157155463 - EcE24377A_2474 - hypothetical protein 2359 50.74 0 2460653..2462467 + 604 157157339 - EcE24377A_2475 - ABC transporter, peripllasmic solute-binding proteins 2360 51.42 0 2462468..2463562 + 364 157156772 - EcE24377A_2476 - ABC transporter, permease protein 2361 52.73 0 2463562..2464587 + 341 157158803 - EcE24377A_2477 - ABC transporter, permease protein 2362 51.45 0 2464589..2466178 + 529 157155364 - EcE24377A_2478 - ABC transporter, ATP-binding protein 2363 48.70 0 2466182..2466526 - 114 157156668 - EcE24377A_2479 - hypothetical protein 2364 53.57 0 2466859..2468049 - 396 157158188 bcr EcE24377A_2480 - bicyclomycin/multidrug efflux system 2365 52.59 0 2468077..2468772 - 231 157155587 rsuA EcE24377A_2481 - 16S rRNA pseudouridylate synthase A 2366 52.92 0 2468921..2470681 + 586 157154738 - EcE24377A_2482 - putative helicase 2367 50.53 0 2470806..2471090 + 94 157158450 rplY EcE24377A_2483 - 50S ribosomal protein L25 2368 52.48 0 2471229..2472236 - 335 157158201 ndpA EcE24377A_2484 - nucleoid-associated protein NdpA 2369 38.33 -2 2472281..2472400 - 39 157158345 - EcE24377A_2485 - hypothetical protein 2370 49.56 0 2472418..2472645 + 75 157156880 - EcE24377A_2486 - hypothetical protein 2371 52.36 0 2472665..2474425 + 586 157155141 - EcE24377A_2487 - sulfatase family protein 2372 34.38 -2 2477387..2477482 + 31 157158735 - EcE24377A_2491 - hypothetical protein 2373 52.01 0 2477591..2478238 + 215 157156289 narP EcE24377A_2492 - transcriptional regulator NarP 2374 53.66 0 2478273..2479325 - 350 157156945 - EcE24377A_2493 - cytochrome c-type biogenesis family protein 2375 54.66 0 2479322..2479879 - 185 157157963 dsbE EcE24377A_2494 - thiol:disulfide interchange protein DsbE 2376 57.20 +1 2479876..2481819 - 647 157158675 ccmF EcE24377A_2495 - cytochrome c-type biogenesis protein CcmF 2377 53.96 0 2481816..2482295 - 159 157158146 ccmE EcE24377A_2496 - cytochrome c-type biogenesis protein CcmE 2378 57.14 +1 2482292..2482501 - 69 157157647 ccmD EcE24377A_2497 - heme exporter protein D 2379 55.28 0 2482498..2483235 - 245 157155253 ccmC EcE24377A_2498 - heme exporter protein C 2380 55.96 0 2483277..2483939 - 220 157155955 ccmB EcE24377A_2499 - heme exporter protein CcmB 2381 55.66 0 2483936..2484553 - 205 157155394 ccmA EcE24377A_2500 - cytochrome c biogenesis protein CcmA 2382 51.58 0 2484572..2485174 - 200 157154917 napC EcE24377A_2501 - cytochrome c-type protein NapC 2383 55.56 0 2485184..2485633 - 149 157155939 napB EcE24377A_2502 - diheme cytochrome c550 2384 56.25 +1 2485630..2486493 - 287 157157831 napH EcE24377A_2503 - quinol dehydrogenase membrane component 2385 58.91 +1 2486480..2487175 - 231 157154989 - EcE24377A_2504 - quinol dehydrogenase periplasmic component 2386 55.93 0 2487182..2489668 - 828 157155597 napA EcE24377A_2505 - nitrate reductase 2387 54.55 0 2489665..2489928 - 87 157157310 napD EcE24377A_2506 - assembly protein for periplasmic nitrate reductase 2388 54.55 0 2489918..2490412 - 164 157159007 napF EcE24377A_2507 - ferredoxin-type protein 2389 49.90 0 2490820..2491308 + 162 157157746 eco EcE24377A_2508 - ecotin precursor 2390 54.22 0 2491457..2493103 - 548 157157678 mqo EcE24377A_2509 - malate:quinone oxidoreductase 2391 53.35 0 2493321..2494964 - 547 157157028 - EcE24377A_2510 - multidrug transporter membrane component/ATP-binding component 2392 52.53 0 2495040..2495690 - 216 157156371 alkB EcE24377A_2511 - alkylated DNA repair protein AlkB 2393 57.37 +1 2495690..2496754 - 354 157156573 ada EcE24377A_2512 - regulatory protein Ada 2394 52.75 0 2496828..2497883 - 351 157156220 apbE EcE24377A_2513 - thiamine biosynthesis lipoprotein ApbE 2395 50.64 0 2497995..2499086 - 363 157157896 ompC EcE24377A_2514 - outer membrane porin protein C 2396 49.35 0 2499825..2502497 + 890 157154810 yojN EcE24377A_2515 - phosphotransfer intermediate protein in two-component regulatory system with RcsBC 2397 47.77 0 2502514..2503164 + 216 157155457 rcsB EcE24377A_2517 - transcriptional regulator RcsB 2398 50.98 0 2503161..2503262 - 33 157156212 - EcE24377A_2516 - hypothetical protein 2399 44.79 -1 2503193..2503288 + 31 157156685 - EcE24377A_2518 - hypothetical protein 2400 50.84 0 2503364..2506213 - 949 157154824 rcsC EcE24377A_2519 - hybrid sensory kinase in two-component regulatory system with RcsB and YojN 2401 48.96 0 2506383..2506478 + 31 157155592 - EcE24377A_2520 - hypothetical protein 2402 52.51 0 2506488..2507264 - 258 157158749 - EcE24377A_2521 - hypothetical protein 2403 54.79 0 2507269..2508918 - 549 157158399 - EcE24377A_2522 - hypothetical protein 2404 53.78 0 2508919..2513433 - 1504 157157431 - EcE24377A_2523 - alpha-2-macroglobulin family protein 2405 52.23 0 2513457..2514107 - 216 157156164 - EcE24377A_2524 - hypothetical protein 2406 50.98 0 2514077..2515765 - 562 157158702 - EcE24377A_2525 - hypothetical protein 2407 53.81 0 2515914..2518541 - 875 157154912 gyrA EcE24377A_2526 - DNA gyrase subunit A 2408 54.08 0 2518688..2519410 + 240 157154839 ubiG EcE24377A_2527 - 3-demethylubiquinone-9 3-methyltransferase 2409 51.48 0 2519471..2523229 - 1252 157155352 - EcE24377A_2528 - adhesin 2410 50.51 0 2522981..2523079 + 32 157158041 - EcE24377A_2529 - hypothetical protein 2411 30.11 -2 2523590..2523682 + 30 157158872 - EcE24377A_2530 - hypothetical protein 2412 53.98 0 2523925..2526210 + 761 157156706 nrdA EcE24377A_2531 - ribonucleotide-diphosphate reductase subunit alpha 2413 50.49 0 2526299..2527429 + 376 157157492 nrdB EcE24377A_2532 - ribonucleotide-diphosphate reductase subunit beta 2414 56.08 0 2527429..2527683 + 84 157155326 - EcE24377A_2533 - 2Fe-2S ferredoxin YfaE 2415 49.46 0 2527737..2528387 - 216 157158946 inaA EcE24377A_2534 - hypothetical protein 2416 42.51 -1 2528602..2528808 + 68 157157241 - EcE24377A_2535 - hypothetical protein 2417 45.78 0 2528850..2529926 - 358 157157861 glpQ EcE24377A_2536 - glycerophosphodiester phosphodiesterase 2418 52.54 0 2529931..2531289 - 452 157156117 glpT EcE24377A_2537 - sn-glycerol-3-phosphate transporter 2419 34.85 -2 2531340..2531537 + 65 157156931 - EcE24377A_2538 - hypothetical protein 2420 57.34 +1 2531562..2533190 + 542 157155213 glpA EcE24377A_2539 - sn-glycerol-3-phosphate dehydrogenase subunit A 2421 56.03 0 2533180..2534439 + 419 157155773 glpB EcE24377A_2540 - anaerobic glycerol-3-phosphate dehydrogenase subunit B 2422 54.07 0 2534436..2535626 + 396 157156419 glpC EcE24377A_2541 - sn-glycerol-3-phosphate dehydrogenase subunit C 2423 48.84 0 2535820..2536722 + 300 157156837 - EcE24377A_2542 - hypothetical protein 2424 54.97 0 2536763..2537275 - 170 157156572 - EcE24377A_2543 - HpcH/HpaI aldolase/citrate lyase family protein 2425 53.95 0 2537288..2538490 - 400 157158520 - EcE24377A_2544 - competence damage-inducible protein A 2426 53.78 0 2538590..2539132 - 180 157156254 - EcE24377A_2545 - outer membrane protein, YfaZ 2427 46.71 0 2539411..2539836 + 141 157156936 - EcE24377A_2546 - NUDIX family hydrolase 2428 43.62 -1 2539875..2540477 - 200 157159312 - EcE24377A_2547 - phosphoglycerate mutase family protein 2429 51.67 0 2540785..2541924 + 379 157155035 arnB EcE24377A_2548 - UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 2430 49.85 0 2541928..2542896 + 322 157158548 arnC EcE24377A_2549 - undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase 2431 51.29 0 2542896..2544878 + 660 157159038 arnA EcE24377A_2550 - bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase 2432 52.64 0 2544875..2545765 + 296 157155478 - EcE24377A_2551 - polysaccharide deacetylase domain-containing protein 2433 51.00 0 2545765..2547417 + 550 157154965 arnT EcE24377A_2552 - 4-amino-4-deoxy-L-arabinose transferase 2434 53.57 0 2547414..2547749 + 111 157155030 - EcE24377A_2553 - SMR family multidrug efflux pump 2435 48.06 0 2547749..2548135 + 128 157158788 - EcE24377A_2555 - hypothetical protein 2436 47.57 0 2548129..2548395 - 88 157157275 pmrD EcE24377A_2554 - polymyxin B resistance protein pmrD 2437 56.42 +1 2548505..2549860 - 451 157158327 menE EcE24377A_2556 - O-succinylbenzoic acid--CoA ligase 2438 59.61 +1 2549857..2550819 - 320 157158055 menC EcE24377A_2557 - O-succinylbenzoate synthase 2439 54.90 0 2550819..2551676 - 285 157157379 menB EcE24377A_2558 - naphthoate synthase 2440 56.52 +1 2551691..2552449 - 252 157159079 - EcE24377A_2559 - acyl-CoA thioester hydrolase YfbB 2441 57.99 +1 2552446..2554116 - 556 157158309 menD EcE24377A_2560 - 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase 2442 54.01 0 2554205..2555500 - 431 157157025 menF EcE24377A_2562 - menaquinone-specific isochorismate synthase 2443 51.96 0 2555579..2555884 - 101 157157711 - EcE24377A_2563 - hypothetical protein 2444 47.19 0 2555939..2556400 - 153 157158359 - EcE24377A_2564 - hypothetical protein 2445 50.65 0 2556465..2557382 + 305 157158471 rnz EcE24377A_2565 - ribonuclease Z 2446 35.88 -2 2557573..2558790 + 405 157159127 - EcE24377A_2566 - deubiquitinase 2447 45.04 0 2559920..2560423 + 167 157155210 - EcE24377A_2568 - hypothetical protein 2448 57.48 +1 2560490..2561947 - 485 157156426 nuoN EcE24377A_2569 - NADH dehydrogenase subunit N 2449 54.77 0 2561954..2563483 - 509 157157094 nuoM EcE24377A_2570 - NADH dehydrogenase subunit M 2450 56.95 +1 2563647..2565488 - 613 157157147 nuoL EcE24377A_2571 - NADH dehydrogenase subunit L 2451 54.46 0 2565485..2565787 - 100 157157786 nuoK EcE24377A_2572 - NADH dehydrogenase subunit K 2452 53.69 0 2565784..2566338 - 184 157157709 nuoJ EcE24377A_2573 - NADH dehydrogenase subunit J 2453 54.14 0 2566350..2566892 - 180 157157555 nuoI EcE24377A_2574 - NADH dehydrogenase subunit I 2454 54.29 0 2566907..2567884 - 325 157156632 nuoH EcE24377A_2575 - NADH dehydrogenase subunit H 50.48 MEAN 5.64 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0