version 1.0
Escherichia coli E24377A, complete genome - 1..4979619 4749 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 148 55.56 0 162967..163497 - 176 157154764 ligT EcE24377A_0151 - 2'-5' RNA ligase 149 56.63 +1 163571..166000 + 809 157156250 hrpB EcE24377A_0152 - ATP-dependent RNA helicase HrpB 150 55.07 0 166196..168730 + 844 157158219 mrcB EcE24377A_0153 - penicillin-binding protein 1b 151 38.52 -2 168795..168929 - 44 157157969 - EcE24377A_0154 - hypothetical protein 152 51.43 0 168950..171193 + 747 157157325 fhuA EcE24377A_0155 - ferrichrome outer membrane transporter 153 56.77 +1 171244..172041 + 265 157158286 fhuC EcE24377A_0156 - iron-hydroxamate transporter ATP-binding subunit 154 54.77 0 172041..172931 + 296 157155549 fhuD EcE24377A_0157 - iron-hydroxamate transporter substrate-binding subunit 155 59.25 +1 172928..174910 + 660 157155293 fhuB EcE24377A_0158 - iron-hydroxamate transporter permease subunit 156 55.50 0 174945..176225 - 426 157155177 hemL EcE24377A_0159 - glutamate-1-semialdehyde aminotransferase 157 53.87 0 176450..177871 + 473 157156910 clcA EcE24377A_0160 - chloride channel protein 158 51.01 0 177953..178297 + 114 157156275 - EcE24377A_0161 - iron-sulfur cluster insertion protein ErpA 159 54.01 0 178344..178967 - 207 157157954 - EcE24377A_0162 - hypothetical protein 160 52.93 0 179005..179805 - 266 157157282 btuF EcE24377A_0163 - vitamin B12-transporter protein BtuF 161 52.50 0 179798..180496 - 232 157158960 mtnN EcE24377A_0164 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 162 47.63 0 180580..182097 + 505 157155851 dgt EcE24377A_0165 - deoxyguanosinetriphosphate triphosphohydrolase 163 54.18 0 182227..183651 + 474 157155195 degP EcE24377A_0166 - serine endoprotease 164 52.87 0 183833..184963 + 376 157156858 cdaR EcE24377A_0167 - carbohydrate diacid transcriptional activator CdaR 165 44.44 -1 185052..185438 - 128 157156211 - EcE24377A_0168 - hypothetical protein 166 52.97 0 185753..186577 - 274 157156037 dapD EcE24377A_0169 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 167 53.50 0 186608..189280 - 890 157157798 glnD EcE24377A_0170 - PII uridylyl-transferase 168 50.57 0 189342..190136 - 264 157157350 map EcE24377A_0171 - methionine aminopeptidase 169 51.24 0 190504..191229 + 241 157159281 rpsB EcE24377A_0173 - 30S ribosomal protein S2 170 49.77 0 191487..192338 + 283 157158600 tsf EcE24377A_0174 - elongation factor Ts 171 52.75 0 192485..193210 + 241 157155844 pyrH EcE24377A_0175 - uridylate kinase 172 50.90 0 193502..194059 + 185 157155211 frr EcE24377A_0176 - ribosome recycling factor 173 52.55 0 194151..195347 + 398 157156618 dxr EcE24377A_0177 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 174 49.80 0 195536..196294 + 252 157155987 uppS EcE24377A_0178 - undecaprenyl pyrophosphate synthase 175 50.82 0 196307..197164 + 285 157158930 cdsA1 EcE24377A_0179 - CDP-diglyceride synthase 176 50.78 0 197176..198528 + 450 157156244 rseP EcE24377A_0180 - zinc metallopeptidase 177 50.60 0 198558..200990 + 810 157155563 yaeT EcE24377A_0181 - outer membrane protein assembly factor YaeT 178 50.41 0 201112..201597 + 161 157155451 skp EcE24377A_0182 - periplasmic chaperone 179 52.92 0 201601..202626 + 341 157154842 lpxD EcE24377A_0183 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 180 50.44 0 202731..203186 + 151 157156776 fabZ EcE24377A_0184 - (3R)-hydroxymyristoyl-ACP dehydratase 181 53.11 0 203190..203978 + 262 157156102 lpxA EcE24377A_0185 - UDP-N-acetylglucosamine acyltransferase 182 53.79 0 203978..205126 + 382 157158059 lpxB EcE24377A_0186 - lipid-A-disaccharide synthase 183 57.29 +1 205123..205719 + 198 157157454 rnhB EcE24377A_0187 - ribonuclease HII 184 55.04 0 205756..209238 + 1160 157158983 dnaE EcE24377A_0188 - DNA polymerase III subunit alpha 185 52.60 0 209251..210210 + 319 157155750 accA EcE24377A_0189 - acetyl-CoA carboxylase carboxyltransferase subunit alpha 186 51.07 0 210309..212450 + 713 157155550 ldcC EcE24377A_0190 - lysine decarboxylase, constitutive 187 51.79 0 212507..212896 + 129 157155586 - EcE24377A_0191 - hypothetical protein 188 58.43 +1 212961..214259 + 432 157158325 tilS EcE24377A_0192 - tRNA(Ile)-lysidine synthetase 189 47.51 0 214308..214568 - 86 157155017 rof EcE24377A_0193 - Rho-binding antiterminator 190 50.75 0 214555..214755 - 66 157154914 - EcE24377A_0194 - hypothetical protein 191 52.38 0 214921..215466 + 181 157156424 - EcE24377A_0195 - hypothetical protein 192 54.61 0 215463..215885 + 140 157157087 - EcE24377A_0196 - hypothetical protein 193 51.34 0 215899..216609 + 236 157157173 cutF EcE24377A_0197 - lipoprotein involved with copper homeostasis and adhesion 194 55.05 0 216859..217839 + 326 157157308 - EcE24377A_0198 - IS621, transposase 195 53.15 0 217966..218076 + 36 157156272 - EcE24377A_0200 - hypothetical protein 196 54.33 0 218919..220637 - 572 157156008 proS EcE24377A_0201 - prolyl-tRNA synthetase 197 54.94 0 220749..221456 - 235 157155318 - EcE24377A_0202 - hypothetical protein 198 54.57 0 221453..221857 - 134 157154956 rcsF EcE24377A_0203 - outer membrane lipoprotein 199 48.65 0 221975..222790 - 271 157159295 metQ EcE24377A_0204 - DL-methionine transporter substrate-binding subunit 200 51.99 0 222830..223483 - 217 157158636 metI EcE24377A_0205 - DL-methionine transporter permease subunit 201 52.71 0 223476..224507 - 343 157158405 metN EcE24377A_0206 - DL-methionine transporter ATP-binding subunit 202 50.00 0 224695..225270 + 191 157157978 - EcE24377A_0207 - D,D-heptose 1,7-bisphosphate phosphatase 203 46.02 0 231166..231969 + 267 157159277 dkgB EcE24377A_0213 - 2,5-diketo-D-gluconate reductase B 204 49.51 0 231966..232880 - 304 157155058 - EcE24377A_0212 - LysR family transcriptional regulator 205 52.43 0 233121..233921 + 266 157155840 - EcE24377A_0214 - hypothetical protein 206 49.16 0 233999..234769 + 256 157156387 - EcE24377A_0215 - UbiE/COQ5 family methlytransferase 207 52.17 0 234817..236175 - 452 157157200 mltD EcE24377A_0216 - putative membrane-bound lytic murein transglycosylase D 208 40.21 -1 236247..237002 - 251 157157699 gloB EcE24377A_0217 - putative hydroxyacylglutathione hydrolase 209 49.38 0 237036..237758 + 240 157155536 - EcE24377A_0220 - putative methyltransferase 210 49.61 0 237199..237327 - 42 157157206 - EcE24377A_0218 - hypothetical protein 211 50.00 0 237755..238222 - 155 157156093 rnhA EcE24377A_0219 - ribonuclease H 212 50.82 0 238287..239018 + 243 157156660 dnaQ EcE24377A_0221 - DNA polymerase III subunit epsilon 213 33.33 -2 239237..239335 + 32 157157811 - EcE24377A_0223 - hypothetical protein 214 42.75 -1 239557..240342 + 261 157158497 - EcE24377A_0224 - putative lipoprotein 215 38.80 -2 240968..241882 - 304 157159163 - EcE24377A_0225 - hypothetical protein 216 38.51 -2 241926..242408 - 160 157155635 - EcE24377A_0226 - hypothetical protein 217 55.95 0 242432..243784 - 450 157155016 - EcE24377A_0227 - ImpA domain-containing protein 218 56.62 +1 243795..247319 - 1174 157155738 - EcE24377A_0228 - hypothetical protein 219 57.89 +1 247338..248750 - 470 157156439 - EcE24377A_0229 - ImpA domain-containing protein 220 63.44 +2 248755..249498 - 247 157157081 - EcE24377A_0230 - type VI secretion-associated protein 221 59.64 +1 249495..252254 - 919 157157697 - EcE24377A_0231 - ATP-dependent chaperone protein ClpB 222 53.02 0 252263..253024 - 253 157158272 - EcE24377A_0232 - hypothetical protein 223 55.63 0 253029..254360 - 443 157159130 - EcE24377A_0233 - hypothetical protein 224 51.43 0 254363..254887 - 174 157158389 - EcE24377A_0234 - type VI secretion lipoprotein 225 56.91 +1 254884..256164 - 426 157159137 - EcE24377A_0235 - hypothetical protein 226 55.12 0 256189..257271 - 360 157158454 - EcE24377A_0236 - hypothetical protein 227 53.16 0 257235..259085 - 616 157155723 - EcE24377A_0237 - hypothetical protein 228 52.90 0 259089..259502 - 137 157155067 - EcE24377A_0238 - hypothetical protein 229 51.56 0 259509..260984 - 491 157157099 - EcE24377A_0239 - hypothetical protein 230 49.33 0 261035..261259 - 74 157156295 - EcE24377A_0240 - hypothetical protein 231 50.30 0 261294..261794 - 166 157158244 - EcE24377A_0241 - hypothetical protein 232 30.56 -2 262222..262365 + 47 157157420 - EcE24377A_0242 - hypothetical protein 233 54.14 0 262492..263010 + 172 157157744 - EcE24377A_0243 - hypothetical protein 234 51.45 0 263043..263180 + 45 157157261 - EcE24377A_0244 - hypothetical protein 235 55.70 0 263220..265361 + 713 157159093 - EcE24377A_0245 - type VI secretion system Vgr family protein 236 60.78 +1 265437..269684 + 1415 157158534 - EcE24377A_0246 - Rhs protein 237 27.33 -2 269668..270150 + 160 157155100 - EcE24377A_0247 - hypothetical protein 238 54.99 0 272738..273508 - 256 157158346 - EcE24377A_0251 - hypothetical protein 239 50.21 0 273662..274135 + 157 157158901 - EcE24377A_0252 - vertebrate C-lysozyme inhibitor 240 56.69 +1 274178..276622 - 814 157159278 fadE EcE24377A_0253 - acyl-CoA dehydrogenase 241 50.78 0 276862..277440 + 192 157157983 gmhA EcE24377A_0254 - phosphoheptose isomerase 242 51.61 0 277494..277586 + 30 157156263 - EcE24377A_0255 - hypothetical protein 243 53.52 0 277646..278413 + 255 157155204 - EcE24377A_0257 - glutamine amidotransferase, class II 244 49.12 0 278384..279124 - 246 157156909 - EcE24377A_0256 - hypothetical protein 245 39.43 -1 279280..279558 - 92 157155410 - EcE24377A_0258 - hypothetical protein 246 47.13 0 279561..279821 - 86 157155542 - EcE24377A_0259 - addiction module antitoxin 247 51.98 0 279971..280780 + 269 157158742 - EcE24377A_0261 - NlpC/P60 family protein 50.48 MEAN 5.64 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0