version 1.0
Escherichia coli E24377A, complete genome - 1..4979619 4749 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1871 53.35 0 1951577..1952545 - 322 157155284 astE EcE24377A_1966 - succinylglutamate desuccinylase 1872 55.36 0 1952538..1953881 - 447 157155531 astB EcE24377A_1967 - succinylarginine dihydrolase 1873 57.74 +1 1953878..1955356 - 492 157156088 astD EcE24377A_1968 - succinylglutamic semialdehyde dehydrogenase 1874 55.94 0 1955353..1956387 - 344 157157503 astA EcE24377A_1969 - arginine succinyltransferase 1875 54.95 0 1956384..1957604 - 406 157158020 astC EcE24377A_1970 - bifunctional succinylornithine transaminase/acetylornithine transaminase 1876 44.44 -1 1957867..1958037 + 56 157157197 - EcE24377A_1971 - hypothetical protein 1877 53.16 0 1958050..1958856 + 268 157157800 xth EcE24377A_1972 - exonuclease III 1878 48.38 0 1959023..1959733 + 236 157156391 - EcE24377A_1973 - hypothetical protein 1879 49.52 0 1959576..1960415 + 279 157157066 - EcE24377A_1974 - hypothetical protein 1880 51.55 0 1960430..1961137 + 235 157156819 - EcE24377A_1975 - hypothetical protein 1881 56.47 +1 1961137..1961685 + 182 157155699 - EcE24377A_1976 - carboxymuconolactone decarboxylase family protein 1882 56.04 0 1961695..1962861 + 388 157155445 - EcE24377A_1977 - hypothetical protein 1883 56.77 +1 1962834..1964369 + 511 157158532 ynjC EcE24377A_1978 - ABC transporter, permease protein 1884 52.14 0 1964369..1965022 + 217 157158900 - EcE24377A_1979 - ABC transporter, ATP-binding protein 1885 53.75 0 1965089..1966396 + 435 157157667 - EcE24377A_1980 - rhodanese-like domain-containing protein 1886 53.95 0 1966405..1967025 - 206 157156475 - EcE24377A_1981 - CDP-alcohol phosphatidyltransferase family protein 1887 55.15 0 1967112..1967519 + 135 157157514 nudG EcE24377A_1983 - pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase 1888 50.92 0 1967485..1967757 - 90 157157965 - EcE24377A_1982 - hypothetical protein 1889 53.65 0 1967993..1969336 + 447 157158996 gdhA EcE24377A_1984 - glutamate dehydrogenase 1890 41.69 -1 1969453..1970493 - 346 157158320 - EcE24377A_1985 - hypothetical protein 1891 54.99 0 1970621..1972582 - 653 157157904 topB EcE24377A_1986 - DNA topoisomerase III 1892 55.17 0 1972587..1973630 - 347 157157367 selD EcE24377A_1987 - selenophosphate synthetase 1893 55.62 0 1973747..1974298 - 183 157158892 - EcE24377A_1988 - hypothetical protein 1894 47.88 0 1974352..1974516 + 54 157158383 - EcE24377A_1989 - hypothetical protein 1895 51.97 0 1974459..1976315 + 618 157158760 sppA EcE24377A_1990 - protease 4 1896 50.93 0 1976482..1977498 + 338 157158977 ansA EcE24377A_1991 - cytoplasmic asparaginase I 1897 52.80 0 1977509..1978150 + 213 157155759 pncA EcE24377A_1992 - nicotinamidase/pyrazinamidase 1898 45.33 0 1978243..1979601 - 452 157155243 ydjE EcE24377A_1993 - major facilitator family transporter 1899 42.16 -1 1979718..1980476 - 252 157158664 - EcE24377A_1994 - DeoR family transcriptional regulator 1900 47.81 0 1980613..1981593 - 326 157159254 - EcE24377A_1995 - aldo/keto reductase family oxidoreductase 1901 45.36 0 1981603..1982550 - 315 157159112 - EcE24377A_1996 - PfkB family kinase 1902 45.40 0 1982555..1983391 - 278 157154881 - EcE24377A_1997 - fructose-bisphosphate aldolase, class II 1903 46.36 0 1983412..1984455 - 347 157155393 gutB EcE24377A_1998 - sorbitol dehydrogenase 1904 49.20 0 1984472..1985851 - 459 157155942 ydjK EcE24377A_1999 - major facilitator family transporter 1905 49.86 0 1985878..1986954 - 358 157156926 - EcE24377A_2000 - zinc-binding dehydrogenase family oxidoreductase 1906 45.05 0 1987324..1987596 - 90 157158076 - EcE24377A_2001 - hypothetical protein 1907 48.31 0 1987638..1988051 - 137 157156280 msrB EcE24377A_2002 - methionine sulfoxide reductase B 1908 49.90 0 1988393..1989388 + 331 157156808 gapA EcE24377A_2003 - giyceraldehyde-3-phosphate dehydrogenase (phosphorylating) 1909 50.33 0 1989451..1990356 + 301 157154792 - EcE24377A_2004 - aldose 1-epimerase family protein 1910 50.53 0 1990407..1991261 - 284 157155366 - EcE24377A_2005 - aldo/keto reductase family oxidoreductase 1911 52.48 0 1991351..1992097 - 248 157156122 mipA EcE24377A_2006 - MltA-interacting protein MipA 1912 50.08 0 1992533..1994467 + 644 157156559 - EcE24377A_2007 - serine kinase family protein 1913 49.07 0 1994580..1995863 + 427 157154798 - EcE24377A_2008 - hypothetical protein 1914 38.55 -2 1996010..1997485 + 491 157155175 - EcE24377A_2009 - diguanylate cyclase 1915 45.81 0 1997666..1999156 + 496 157158224 - EcE24377A_2010 - diguanylate cyclase 1916 50.79 0 1999199..1999702 + 167 157157881 - EcE24377A_2011 - YbaK/prolyl-tRNA synthetase-associated domain-containing protein 1917 46.41 0 1999703..1999855 - 50 157158404 - EcE24377A_2012 - hypothetical protein 1918 55.48 0 1999977..2000423 + 148 157158941 - EcE24377A_2014 - hypothetical protein 1919 52.79 0 2001298..2002479 + 393 157155818 yeaN EcE24377A_2015 - inner membrane transport protein yeaN 1920 53.16 0 2002534..2002881 + 115 157156357 - EcE24377A_2016 - hypothetical protein 1921 52.16 0 2002903..2003157 - 84 157156904 - EcE24377A_2017 - putative lipoprotein 1922 46.67 0 2003211..2004365 + 384 157157378 - EcE24377A_2018 - GAF domain/diguanylate cyclase domain-containing protein 1923 40.35 -1 2004383..2004496 + 37 157157906 - EcE24377A_2019 - hypothetical protein 1924 45.38 0 2004632..2004880 - 82 157158378 - EcE24377A_2020 - hypothetical protein 1925 44.23 -1 2004892..2005047 - 51 157155979 - EcE24377A_2021 - hypothetical protein 1926 51.45 0 2005107..2006315 - 402 157156692 - EcE24377A_2022 - IS605 family transposase OrfB 1927 48.42 0 2006338..2007285 + 315 157158023 - EcE24377A_2023 - IS605 family transposase 1928 45.38 0 2007494..2008132 - 212 157155360 - EcE24377A_2024 - leucine export protein LeuE 1929 52.49 0 2008259..2009182 - 307 157159337 - EcE24377A_2025 - LysR family transcriptional regulator 1930 53.68 0 2009285..2010370 + 361 157156732 ttuC EcE24377A_2026 - tartrate dehydrogenase/decarboxylase 1931 50.78 0 2010621..2012231 + 536 157154828 - EcE24377A_2027 - putative transporter 1932 51.73 0 2012263..2013387 + 374 157154831 - EcE24377A_2028 - Rieske (2Fe-2S) domain-containing protein 1933 50.00 0 2013443..2014408 + 321 157155807 - EcE24377A_2029 - oxidoreductase, FAD/NAD-binding/iron-sulfur cluster binding protein 1934 54.17 0 2014462..2015589 - 375 157156075 rnd EcE24377A_2030 - ribonuclease D 1935 51.42 0 2015659..2017344 - 561 157156786 fadD EcE24377A_2031 - long-chain-fatty-acid--CoA ligase 1936 53.44 0 2017549..2018130 - 193 157156195 slp EcE24377A_2032 - outer membrane protein Slp 1937 55.89 0 2018170..2018865 - 231 157156729 - EcE24377A_2033 - glycoprotease family protein 1938 55.15 0 2018923..2020833 - 636 157157287 - EcE24377A_2034 - hypothetical protein 1939 52.71 0 2020866..2021252 - 128 157157938 - EcE24377A_2035 - hypothetical protein 1940 51.88 0 2020965..2021309 + 114 157155431 - EcE24377A_2036 - endoribonuclease L-PSP family protein 1941 22.46 -2 2021343..2021480 - 45 157158475 - EcE24377A_2037 - hypothetical protein 1942 41.39 -1 2021671..2022030 + 119 157157599 - EcE24377A_2038 - hypothetical protein 1943 56.11 0 2022150..2022329 - 59 157157253 - EcE24377A_2039 - hypothetical protein 1944 50.95 0 2022403..2023764 + 453 157158150 pabB EcE24377A_2040 - para-aminobenzoate synthase component I 1945 54.23 0 2023768..2024346 + 192 157156711 - EcE24377A_2041 - hypothetical protein 1946 53.92 0 2024530..2025894 + 454 157156174 sdaA EcE24377A_2042 - L-serine dehydratase 1 1947 53.95 0 2027626..2029182 - 518 157157134 - EcE24377A_2044 - TerC family/CBS/transporter associated domain-containing protein 1948 50.31 0 2029645..2030616 + 323 157158859 manX EcE24377A_2045 - PTS system, mannose-specific IIAB component 1949 51.44 0 2030679..2031479 + 266 157155886 manY EcE24377A_2046 - PTS system, mannose-specific IIC component 1950 52.82 0 2031492..2032343 + 283 157158926 manZ EcE24377A_2047 - mannose-specific PTS system protein IID 1951 45.10 0 2032398..2032856 + 152 157158437 - EcE24377A_2048 - hypothetical protein 1952 51.50 0 2033286..2033852 + 188 157158392 - EcE24377A_2050 - hypothetical protein 1953 51.36 0 2033849..2034658 - 269 157157858 rrmA EcE24377A_2049 - 23S rRNA methyltransferase A 1954 46.67 0 2034824..2035033 - 69 157157347 cspC EcE24377A_2051 - cold shock-like protein CspC 1955 42.36 -1 2035046..2035189 - 47 157156894 - EcE24377A_2052 - hypothetical protein 1956 43.40 -1 2035859..2036146 - 95 157156232 - EcE24377A_2053 - hypothetical protein 1957 46.53 0 2036221..2036364 - 47 157155554 - EcE24377A_2054 - hypothetical protein 1958 43.33 -1 2036523..2036762 + 79 157158695 - EcE24377A_2055 - hypothetical protein 1959 49.62 0 2036905..2037696 - 263 157158080 kdgR EcE24377A_2056 - transcriptional regulator KdgR 1960 52.47 0 2037873..2039246 + 457 157156529 - EcE24377A_2057 - major facilitator transporter 1961 52.95 0 2039292..2040173 - 293 157156002 - EcE24377A_2058 - heat shock protein HtpX 1962 50.71 0 2040365..2042413 - 682 157155122 prc EcE24377A_2059 - carboxy-terminal protease 1963 53.22 0 2042433..2043131 - 232 157159080 proQ EcE24377A_2060 - putative solute/DNA competence effector 1964 48.19 0 2043228..2043779 - 183 157158805 - EcE24377A_2061 - GAF domain-containing protein 1965 50.62 0 2043855..2045138 + 427 157158026 - EcE24377A_2062 - PqiA family integral membrane protein 1966 53.03 0 2045101..2047740 + 879 157157260 - EcE24377A_2063 - mce-related protein 1967 52.35 0 2047814..2049259 + 481 157157684 - EcE24377A_2064 - rRNA (cytosine-C(5)-)-methyltransferase RsmF 1968 48.95 0 2049377..2049613 + 78 157159210 - EcE24377A_2065 - hypothetical protein 1969 45.65 0 2049634..2049909 + 91 157159149 - EcE24377A_2066 - hypothetical protein 1970 47.79 0 2049910..2050566 - 218 157158545 pphA EcE24377A_2067 - serine/threonine protein phosphatase 1 50.48 MEAN 5.64 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0