version 1.0
Escherichia coli E24377A, complete genome - 1..4979619 4749 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1250 52.17 0 1313308..1313652 - 114 157156205 - EcE24377A_1314 - hypothetical protein 1251 32.18 -2 1313654..1313827 - 57 157156912 - EcE24377A_1315 - hypothetical protein 1252 50.00 0 1314074..1314193 + 39 157156198 - EcE24377A_1316 - hypothetical protein 1253 50.61 0 1314162..1314572 + 136 157156771 - EcE24377A_1317 - hypothetical protein 1254 43.45 -1 1314944..1315210 - 88 157154772 minE EcE24377A_1318 - cell division topological specificity factor MinE 1255 49.94 0 1315214..1316026 - 270 157155382 minD EcE24377A_1319 - cell division inhibitor MinD 1256 51.01 0 1316050..1316745 - 231 157158782 minC EcE24377A_1320 - septum formation inhibitor 1257 42.28 -1 1317265..1317633 + 122 157159409 - EcE24377A_1321 - putative fels-1 prophage protein 1258 43.03 -1 1317753..1318154 - 133 157155831 - EcE24377A_1322 - pre-peptidase C-terminal domain-containing protein 1259 43.54 -1 1318396..1318689 + 97 157155276 - EcE24377A_1323 - hypothetical protein 1260 51.97 0 1318761..1319420 + 219 157159100 - EcE24377A_1324 - hypothetical protein 1261 47.40 0 1319497..1319958 + 153 157158771 - EcE24377A_1325 - hypothetical protein 1262 42.34 -1 1321212..1321322 - 36 157156225 - EcE24377A_1327 - hypothetical protein 1263 48.10 0 1321448..1321867 + 139 157159399 umuD EcE24377A_1328 - DNA polymerase V subunit UmuD 1264 50.75 0 1321867..1323135 + 422 157155325 umuC EcE24377A_1329 - DNA polymerase V subunit UmuC 1265 52.17 0 1323181..1323711 - 176 157158035 dsbB EcE24377A_1330 - disulfide bond formation protein B 1266 52.66 0 1323857..1325398 - 513 157158871 nhaB EcE24377A_1331 - sodium/proton antiporter 1267 51.53 0 1325620..1326339 + 239 157159010 fadR EcE24377A_1332 - fatty acid metabolism regulator 1268 49.58 0 1326391..1327923 - 510 157155859 - EcE24377A_1333 - hypothetical protein 1269 55.97 0 1328253..1329551 + 432 157157970 dadA EcE24377A_1334 - D-amino acid dehydrogenase small subunit 1270 58.08 +1 1329561..1330631 + 356 157157280 alr1 EcE24377A_1335 - alanine racemase 1271 52.62 0 1331017..1332753 - 578 157155249 cvrA EcE24377A_1336 - potassium/proton antiporter 1272 52.90 0 1332848..1333762 - 304 157155614 ldcA EcE24377A_1337 - L,D-carboxypeptidase A 1273 50.96 0 1333748..1334473 + 241 157158317 mltE EcE24377A_1338 - membrane-bound lytic murein transglycosylase E 1274 50.61 0 1334475..1335209 - 244 157159385 - EcE24377A_1339 - putative type IV pilus assembly protein PilZ 1275 53.73 0 1335410..1335664 + 84 157157734 - EcE24377A_1341 - transglycosylase-associated protein 1276 53.70 0 1335464..1335733 - 89 157157294 - EcE24377A_1340 - hypothetical protein 1277 41.27 -1 1335842..1336282 + 146 157158329 - EcE24377A_1342 - hypothetical protein 1278 52.12 0 1336361..1338058 - 565 157159159 treA EcE24377A_1343 - trehalase 1279 49.82 0 1338378..1339796 - 472 157157322 dhaM EcE24377A_1344 - dihydroxyacetone kinase subunit M 1280 53.40 0 1339807..1340439 - 210 157155726 - EcE24377A_1345 - dihydroxyacetone kinase ADP-binding subunit 1281 52.75 0 1340450..1341520 - 356 157158476 dhaK EcE24377A_1346 - dihydroxyacetone kinase subunit DhaK 1282 51.25 0 1341748..1343667 + 639 157159109 dhaR EcE24377A_1347 - DNA-binding transcriptional regulator DhaR 1283 49.65 0 1343767..1346652 - 961 157157255 - EcE24377A_1348 - putative outer membrane autotransporter 1284 36.76 -2 1346997..1347200 + 67 157157620 - EcE24377A_1349 - hypothetical protein 1285 51.01 0 1347493..1348584 - 363 157157840 engD EcE24377A_1350 - translation-associated GTPase 1286 49.91 0 1348701..1349285 - 194 157156333 pth EcE24377A_1351 - peptidyl-tRNA hydrolase 1287 53.05 0 1349563..1349841 + 92 157155770 - EcE24377A_1352 - putative inner membrane protein 1288 55.05 0 1349896..1351548 - 550 157158365 ychM EcE24377A_1353 - putative sulfate transporter YchM 1289 44.72 -1 1351481..1351603 - 40 157156600 - EcE24377A_1354 - hypothetical protein 1290 52.64 0 1351700..1352647 - 315 157156694 prs EcE24377A_1355 - ribose-phosphate pyrophosphokinase 1291 53.40 0 1352798..1353649 - 283 157157479 ispE EcE24377A_1356 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1292 51.28 0 1353649..1354272 - 207 157158274 lolB EcE24377A_1357 - outer membrane lipoprotein LolB 1293 54.18 0 1354486..1355742 + 418 157158798 hemA EcE24377A_1358 - glutamyl-tRNA reductase 1294 53.09 0 1355784..1356866 + 360 157158410 prfA EcE24377A_1359 - peptide chain release factor 1 1295 55.16 0 1356866..1357699 + 277 157156593 hemK EcE24377A_1360 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1296 47.58 0 1357696..1358088 + 130 157154746 - EcE24377A_1361 - putative transcriptional regulator 1297 46.67 0 1358092..1358901 + 269 157156818 sirB1 EcE24377A_1362 - putative transcriptional regulator 1298 51.58 0 1358937..1359791 + 284 157158072 kdsA EcE24377A_1363 - 2-dehydro-3-deoxyphosphooctonate aldolase 1299 53.33 0 1359940..1360074 - 44 157156804 - EcE24377A_1364 - hypothetical protein 1300 53.33 0 1360475..1360609 - 44 157155447 - EcE24377A_1365 - hypothetical protein 1301 48.86 0 1360988..1362088 - 366 157157160 - EcE24377A_1366 - calcium/sodium:proton antiporter 1302 45.89 0 1362358..1362588 + 76 157158720 - EcE24377A_1367 - cation transport regulator 1303 55.09 0 1362725..1363441 + 238 157159256 - EcE24377A_1368 - chaC protein 1304 51.69 0 1363485..1363838 - 117 157155825 - EcE24377A_1369 - dsrE family protein 1305 50.39 0 1364023..1365417 + 464 157155078 - EcE24377A_1370 - hypothetical protein 1306 51.77 0 1365418..1366068 - 216 157155985 narL EcE24377A_1371 - transcriptional regulator NarL 1307 53.31 0 1366061..1367857 - 598 157156669 narX EcE24377A_1372 - nitrate/nitrite sensor protein NarX 1308 38.36 -2 1367883..1368101 + 72 157157893 - EcE24377A_1373 - hypothetical protein 1309 53.82 0 1368196..1369581 + 461 157157386 narK EcE24377A_1374 - nitrite extrusion protein 1 1310 54.97 0 1370102..1373845 + 1247 157155191 narG EcE24377A_1375 - nitrate reductase, alpha subunit 1311 53.67 0 1373842..1375380 + 512 157159405 narH EcE24377A_1376 - nitrate reductase, beta subunit 1312 54.85 0 1375377..1376087 + 236 157156515 narJ EcE24377A_1377 - nitrate reductase molybdenum cofactor assembly chaperone 1313 56.05 0 1376087..1376764 + 225 157155384 narI1 EcE24377A_1378 - respiratory nitrate reductase, gamma subunit 1314 47.33 0 1377844..1378686 - 280 157156756 purU EcE24377A_1381 - formyltetrahydrofolate deformylase 1315 46.41 0 1378736..1379194 - 152 157155665 - EcE24377A_1382 - hypothetical protein 1316 50.55 0 1379307..1380212 + 301 157157525 - EcE24377A_1383 - hypothetical protein 1317 48.82 0 1380304..1381317 + 337 157156877 - EcE24377A_1384 - response regulator of RpoS 1318 46.97 0 1381519..1382427 + 302 157157142 galU EcE24377A_1385 - UTP--glucose-1-phosphate uridylyltransferase subunit GalU 1319 46.86 0 1382571..1382984 - 137 157157780 hns EcE24377A_1386 - global DNA-binding transcriptional dual regulator H-NS 1320 42.39 -1 1383589..1384206 + 205 157159009 tdk EcE24377A_1387 - thymidine kinase 1321 50.71 0 1385501..1388182 - 893 157155679 adhE EcE24377A_1389 - bifunctional acetaldehyde-CoA/alcohol dehydrogenase 1322 48.30 0 1388659..1389306 + 215 157157980 - EcE24377A_1390 - hypothetical protein 1323 47.67 0 1390044..1391675 + 543 157157312 oppA EcE24377A_1391 - oligopeptide ABC transporter, periplasmic oligopeptide-binding protein 1324 46.47 0 1391761..1392681 + 306 157156245 oppB EcE24377A_1392 - oligopeptide transporter permease 1325 52.26 0 1392696..1393604 + 302 157157719 oppC EcE24377A_1393 - oligopeptide ABC transporter, permease protein OppC 1326 51.28 0 1393616..1394629 + 337 157156418 oppD EcE24377A_1394 - oligopeptide transporter ATP-binding component 1327 52.14 0 1394626..1395630 + 334 157157088 oppF EcE24377A_1395 - oligopeptide ABC transporter, ATP-binding protein OppF 1328 47.58 0 1395683..1396012 - 109 157155070 - EcE24377A_1396 - dsDNA-mimic protein 1329 51.81 0 1396047..1397507 - 486 157159055 cls EcE24377A_1397 - cardiolipin synthetase 1330 42.34 -1 1397878..1399131 - 417 157159270 kch EcE24377A_1398 - voltage-gated potassium channel 1331 48.48 0 1399430..1399726 - 98 157157428 - EcE24377A_1399 - YciI-like protein 1332 46.64 0 1401710..1402378 + 222 157158217 - EcE24377A_1400 - phage N-6-adenine-methyltransferase 1333 37.26 -2 1402742..1403734 + 330 157156044 - EcE24377A_1401 - hypothetical protein 1334 33.81 -2 1404867..1405076 + 69 157156553 - EcE24377A_1402 - hypothetical protein 1335 39.10 -2 1406063..1406773 + 236 157156543 - EcE24377A_1403 - hypothetical protein 1336 41.21 -1 1407125..1409257 + 710 157157072 - EcE24377A_1404 - hypothetical protein 1337 51.79 0 1409617..1410006 + 129 157156436 - EcE24377A_1405 - IS66 family orf1 1338 58.62 +1 1410003..1410350 + 115 157158138 - EcE24377A_1406 - IS66 family orf2 1339 58.74 +1 1410400..1411938 + 512 157157306 - EcE24377A_1407 - IS66 family transposase 1340 40.94 -1 1411961..1412644 + 227 157159212 - EcE24377A_1408 - hypothetical protein 1341 44.25 -1 1412677..1414197 - 506 157158350 - EcE24377A_1409 - putative recombinase 1342 54.72 0 1414288..1415007 + 239 157155811 tonB EcE24377A_1410 - transport protein TonB 1343 48.87 0 1415047..1415445 - 132 157155297 yciA EcE24377A_1411 - acyl-CoA thioester hydrolase 1344 46.30 0 1415550..1416089 - 179 157158909 ispZ EcE24377A_1412 - intracellular septation protein A 1345 49.60 0 1416119..1416862 - 247 157158416 - EcE24377A_1413 - hypothetical protein 1346 49.77 0 1417219..1417857 + 212 157157791 ompW EcE24377A_1414 - outer membrane protein W 1347 46.68 0 1417903..1419033 - 376 157157141 - EcE24377A_1415 - phage integrase family site specific recombinase 1348 49.47 0 1419324..1421795 - 823 157155450 - EcE24377A_1416 - exonuclease family protein 1349 35.19 -2 1421767..1421874 + 35 157154767 - EcE24377A_1417 - hypothetical protein 50.48 MEAN 5.64 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0