version 1.0
Escherichia coli E24377A, complete genome - 1..4979619 4749 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1203 53.33 0 1272879..1273223 + 114 157154943 - EcE24377A_1263 - hypothetical protein 1204 43.81 -1 1273326..1273430 - 34 157158248 - EcE24377A_1264 - hypothetical protein 1205 46.10 0 1273395..1273817 + 140 157156609 - EcE24377A_1265 - hypothetical protein 1206 53.31 0 1274711..1275766 + 351 157155003 - EcE24377A_1266 - hypothetical protein 1207 50.82 0 1275767..1276132 + 121 157158638 - EcE24377A_1267 - crossover junction endodeoxyribonuclease RusA-like protein 1208 47.83 0 1276129..1276818 + 229 157159224 - EcE24377A_1268 - phage antitermination protein Q 1209 38.30 -2 1276963..1277727 + 254 157159351 - EcE24377A_1269 - protein kinase domain-containing protein 1210 39.52 -1 1277724..1278467 + 247 157157467 - EcE24377A_1270 - hypothetical protein 1211 48.07 0 1278600..1278884 + 94 157157704 - EcE24377A_1271 - hypothetical protein 1212 50.67 0 1279035..1280084 + 349 157156016 - EcE24377A_1272 - DNA methylase 1213 59.03 +1 1280912..1281304 + 130 157155638 - EcE24377A_1276 - hypothetical protein 1214 52.90 0 1281294..1281569 + 91 157159162 - EcE24377A_1277 - putative phage holin 1215 55.82 0 1281572..1281949 + 125 157157446 - EcE24377A_1278 - hypothetical protein 1216 54.29 0 1281957..1282061 + 34 157158088 - EcE24377A_1279 - hypothetical protein 1217 45.45 0 1283046..1283210 + 54 157158120 - EcE24377A_1280 - putative lipoprotein 1218 50.45 0 1283292..1283846 + 184 157156752 - EcE24377A_1281 - phage DNA packaging protein Nu1 1219 54.88 0 1283798..1284043 + 81 157154718 - EcE24377A_1282 - putative entero Ail/Lom protein 1220 52.96 0 1284108..1287521 + 1137 157159373 - EcE24377A_1284 - phage tail domain-containing protein 1221 48.03 0 1287521..1288105 + 194 157157597 - EcE24377A_1285 - tail fiber assembly protein 1222 41.55 -1 1288160..1288816 - 218 157155504 - EcE24377A_1286 - hypothetical protein 1223 47.57 0 1288885..1289151 + 88 157157332 - EcE24377A_1287 - hypothetical protein 1224 50.35 0 1289384..1290247 - 287 157157953 potB EcE24377A_1288 - spermidine/putrescine ABC transporter membrane protein 1225 50.48 0 1290231..1291367 - 378 157156235 potA EcE24377A_1289 - putrescine/spermidine ABC transporter ATPase protein 1226 49.84 0 1291617..1292846 + 409 157156938 pepT EcE24377A_1290 - peptidase T 1227 54.10 0 1292992..1294113 - 373 157155178 - EcE24377A_1291 - cupin family protein 1228 51.27 0 1294189..1295649 - 486 157155874 phoQ EcE24377A_1292 - sensor protein PhoQ 1229 47.62 0 1295649..1296320 - 223 157159002 phoP EcE24377A_1293 - DNA-binding transcriptional regulator PhoP 1230 52.30 0 1296488..1297858 - 456 157154805 purB EcE24377A_1294 - adenylosuccinate lyase 1231 57.32 +1 1297862..1298503 - 213 157156571 - EcE24377A_1295 - hypothetical protein 1232 53.66 0 1298539..1299645 - 368 157156703 trmU EcE24377A_1296 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1233 50.43 0 1299699..1300160 - 153 157156203 - EcE24377A_1297 - NUDIX family hydrolase 1234 51.22 0 1300170..1300823 - 217 157158295 rluE EcE24377A_1298 - 23S rRNA pseudouridine synthase E 1235 50.20 0 1300995..1302245 + 416 157155568 icd EcE24377A_1299 - isocitrate dehydrogenase 1236 36.79 -2 1303367..1303771 - 134 157157286 - EcE24377A_1300 - hypothetical protein 1237 48.50 0 1303992..1304723 - 243 157158661 - EcE24377A_1301 - transcriptional regulator mlrA-like protein 1238 49.02 0 1304633..1304785 - 50 157155353 - EcE24377A_1302 - hypothetical protein 1239 43.56 -1 1304928..1306139 - 403 157154832 - EcE24377A_1303 - BLUF/cyclic diguanylate phosphodiesterase domain-containing protein 1240 36.63 -2 1306732..1307004 + 90 157158780 - EcE24377A_1304 - hypothetical protein 1241 35.58 -2 1307033..1307299 + 88 157155634 - EcE24377A_1305 - hypothetical protein 1242 35.34 -2 1307412..1307660 + 82 157159276 - EcE24377A_1306 - hypothetical protein 1243 44.64 -1 1307950..1309515 + 521 157157600 - EcE24377A_1307 - cyclic diguanylate phosphodiesterase domain-containing protein 1244 41.55 -1 1309647..1309865 + 72 157157960 - EcE24377A_1308 - hypothetical protein 1245 30.56 -2 1309958..1310101 + 47 157156332 - EcE24377A_1309 - hypothetical protein 1246 39.52 -1 1310265..1310474 + 69 157156097 - EcE24377A_1310 - hypothetical protein 1247 44.68 -1 1310730..1310870 + 46 157156794 - EcE24377A_1311 - hypothetical protein 1248 50.71 0 1311992..1312912 + 306 157154735 - EcE24377A_1312 - autotransporter (AT) family porin 1249 45.15 0 1312969..1313298 - 109 157155388 - EcE24377A_1313 - hypothetical protein 1250 52.17 0 1313308..1313652 - 114 157156205 - EcE24377A_1314 - hypothetical protein 1251 32.18 -2 1313654..1313827 - 57 157156912 - EcE24377A_1315 - hypothetical protein 1252 50.00 0 1314074..1314193 + 39 157156198 - EcE24377A_1316 - hypothetical protein 1253 50.61 0 1314162..1314572 + 136 157156771 - EcE24377A_1317 - hypothetical protein 1254 43.45 -1 1314944..1315210 - 88 157154772 minE EcE24377A_1318 - cell division topological specificity factor MinE 1255 49.94 0 1315214..1316026 - 270 157155382 minD EcE24377A_1319 - cell division inhibitor MinD 1256 51.01 0 1316050..1316745 - 231 157158782 minC EcE24377A_1320 - septum formation inhibitor 1257 42.28 -1 1317265..1317633 + 122 157159409 - EcE24377A_1321 - putative fels-1 prophage protein 1258 43.03 -1 1317753..1318154 - 133 157155831 - EcE24377A_1322 - pre-peptidase C-terminal domain-containing protein 1259 43.54 -1 1318396..1318689 + 97 157155276 - EcE24377A_1323 - hypothetical protein 1260 51.97 0 1318761..1319420 + 219 157159100 - EcE24377A_1324 - hypothetical protein 1261 47.40 0 1319497..1319958 + 153 157158771 - EcE24377A_1325 - hypothetical protein 1262 42.34 -1 1321212..1321322 - 36 157156225 - EcE24377A_1327 - hypothetical protein 1263 48.10 0 1321448..1321867 + 139 157159399 umuD EcE24377A_1328 - DNA polymerase V subunit UmuD 1264 50.75 0 1321867..1323135 + 422 157155325 umuC EcE24377A_1329 - DNA polymerase V subunit UmuC 1265 52.17 0 1323181..1323711 - 176 157158035 dsbB EcE24377A_1330 - disulfide bond formation protein B 1266 52.66 0 1323857..1325398 - 513 157158871 nhaB EcE24377A_1331 - sodium/proton antiporter 1267 51.53 0 1325620..1326339 + 239 157159010 fadR EcE24377A_1332 - fatty acid metabolism regulator 1268 49.58 0 1326391..1327923 - 510 157155859 - EcE24377A_1333 - hypothetical protein 1269 55.97 0 1328253..1329551 + 432 157157970 dadA EcE24377A_1334 - D-amino acid dehydrogenase small subunit 1270 58.08 +1 1329561..1330631 + 356 157157280 alr1 EcE24377A_1335 - alanine racemase 1271 52.62 0 1331017..1332753 - 578 157155249 cvrA EcE24377A_1336 - potassium/proton antiporter 1272 52.90 0 1332848..1333762 - 304 157155614 ldcA EcE24377A_1337 - L,D-carboxypeptidase A 1273 50.96 0 1333748..1334473 + 241 157158317 mltE EcE24377A_1338 - membrane-bound lytic murein transglycosylase E 1274 50.61 0 1334475..1335209 - 244 157159385 - EcE24377A_1339 - putative type IV pilus assembly protein PilZ 1275 53.73 0 1335410..1335664 + 84 157157734 - EcE24377A_1341 - transglycosylase-associated protein 1276 53.70 0 1335464..1335733 - 89 157157294 - EcE24377A_1340 - hypothetical protein 1277 41.27 -1 1335842..1336282 + 146 157158329 - EcE24377A_1342 - hypothetical protein 1278 52.12 0 1336361..1338058 - 565 157159159 treA EcE24377A_1343 - trehalase 1279 49.82 0 1338378..1339796 - 472 157157322 dhaM EcE24377A_1344 - dihydroxyacetone kinase subunit M 1280 53.40 0 1339807..1340439 - 210 157155726 - EcE24377A_1345 - dihydroxyacetone kinase ADP-binding subunit 1281 52.75 0 1340450..1341520 - 356 157158476 dhaK EcE24377A_1346 - dihydroxyacetone kinase subunit DhaK 1282 51.25 0 1341748..1343667 + 639 157159109 dhaR EcE24377A_1347 - DNA-binding transcriptional regulator DhaR 1283 49.65 0 1343767..1346652 - 961 157157255 - EcE24377A_1348 - putative outer membrane autotransporter 1284 36.76 -2 1346997..1347200 + 67 157157620 - EcE24377A_1349 - hypothetical protein 1285 51.01 0 1347493..1348584 - 363 157157840 engD EcE24377A_1350 - translation-associated GTPase 1286 49.91 0 1348701..1349285 - 194 157156333 pth EcE24377A_1351 - peptidyl-tRNA hydrolase 1287 53.05 0 1349563..1349841 + 92 157155770 - EcE24377A_1352 - putative inner membrane protein 1288 55.05 0 1349896..1351548 - 550 157158365 ychM EcE24377A_1353 - putative sulfate transporter YchM 1289 44.72 -1 1351481..1351603 - 40 157156600 - EcE24377A_1354 - hypothetical protein 1290 52.64 0 1351700..1352647 - 315 157156694 prs EcE24377A_1355 - ribose-phosphate pyrophosphokinase 1291 53.40 0 1352798..1353649 - 283 157157479 ispE EcE24377A_1356 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1292 51.28 0 1353649..1354272 - 207 157158274 lolB EcE24377A_1357 - outer membrane lipoprotein LolB 1293 54.18 0 1354486..1355742 + 418 157158798 hemA EcE24377A_1358 - glutamyl-tRNA reductase 1294 53.09 0 1355784..1356866 + 360 157158410 prfA EcE24377A_1359 - peptide chain release factor 1 1295 55.16 0 1356866..1357699 + 277 157156593 hemK EcE24377A_1360 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1296 47.58 0 1357696..1358088 + 130 157154746 - EcE24377A_1361 - putative transcriptional regulator 1297 46.67 0 1358092..1358901 + 269 157156818 sirB1 EcE24377A_1362 - putative transcriptional regulator 1298 51.58 0 1358937..1359791 + 284 157158072 kdsA EcE24377A_1363 - 2-dehydro-3-deoxyphosphooctonate aldolase 1299 53.33 0 1359940..1360074 - 44 157156804 - EcE24377A_1364 - hypothetical protein 1300 53.33 0 1360475..1360609 - 44 157155447 - EcE24377A_1365 - hypothetical protein 1301 48.86 0 1360988..1362088 - 366 157157160 - EcE24377A_1366 - calcium/sodium:proton antiporter 1302 45.89 0 1362358..1362588 + 76 157158720 - EcE24377A_1367 - cation transport regulator 50.48 MEAN 5.64 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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