version 1.0
Escherichia coli E24377A, complete genome - 1..4979619 4749 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1039 53.98 0 1116401..1117945 + 514 157155682 appC EcE24377A_1093 - cytochrome bd-II oxidase, subunit I 1040 53.30 0 1117957..1119093 + 378 157158801 appB EcE24377A_1094 - cytochrome bd-II oxidase, subunit II 1041 46.24 0 1119106..1119198 + 30 157158417 - EcE24377A_1095 - putative cyd operon protein YbgT 1042 53.81 0 1119278..1120576 + 432 157159123 appA EcE24377A_1096 - phosphoanhydride phosphorylase 1043 50.53 0 1120691..1122871 - 726 157154890 etk EcE24377A_1097 - cryptic autophosphorylating protein tyrosine kinase Etk 1044 52.13 0 1122891..1123337 - 148 157155359 - EcE24377A_1098 - phosphotyrosine-protein phosphatase 1045 50.56 0 1123325..1124485 - 386 157156218 yccZ EcE24377A_1099 - outer membrane lipoprotein, group 4 capsule (G4C) polysaccharide 1046 51.88 0 1124510..1126606 - 698 157157653 - EcE24377A_1100 - putative lipoprotein 1047 52.07 0 1126606..1127352 - 248 157158170 - EcE24377A_1101 - hypothetical protein 1048 47.75 0 1127349..1127993 - 214 157156862 ymcC EcE24377A_1102 - group 4 capsule (G4C) polysaccharide, lipoprotein YmcC 1049 55.56 0 1128100..1128423 - 107 157156316 - EcE24377A_1103 - putative inner membrane protein 1050 46.95 0 1128847..1129059 - 70 157158514 - EcE24377A_1104 - cold shock DNA-binding protein 1051 44.13 -1 1129345..1129557 + 70 157157933 - EcE24377A_1105 - cold shock protein CspG 1052 39.66 -1 1129951..1130124 + 57 157157632 - EcE24377A_1107 - GnsA/GnsB family transcriptional regulator 1053 39.66 -1 1129966..1130139 - 57 157158171 - EcE24377A_1106 - hypothetical protein 1054 49.07 0 1130172..1131245 - 357 157156552 - EcE24377A_1108 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1055 52.12 0 1131119..1131283 - 54 157156051 - EcE24377A_1109 - hypothetical protein 1056 54.06 0 1131317..1134061 - 914 157158585 torS EcE24377A_1110 - hybrid sensory histidine kinase TorS 1057 52.77 0 1134144..1135172 + 342 157155126 torT EcE24377A_1112 - periplasmic sensory protein associated with the TorRS two-component regulatory system 1058 52.53 0 1135145..1135837 - 230 157158972 torR EcE24377A_1111 - DNA-binding transcriptional regulator TorR 1059 51.24 0 1135967..1137139 + 390 157155491 torC EcE24377A_1113 - cytochrome c-type protein torC 1060 55.44 0 1137139..1139685 + 848 157155850 torA EcE24377A_1114 - trimethylamine-N-oxide reductase 1061 52.83 0 1139682..1140281 + 199 157156231 torD EcE24377A_1116 - chaperone protein TorD 1062 52.67 0 1140221..1140370 - 49 157156655 - EcE24377A_1115 - hypothetical protein 1063 53.59 0 1140374..1140679 - 101 157158092 cbpM EcE24377A_1117 - chaperone-modulator protein CbpM 1064 53.09 0 1140679..1141599 - 306 157157841 cbpA EcE24377A_1118 - curved DNA-binding protein CbpA 1065 33.97 -2 1141859..1143118 + 419 157157400 - EcE24377A_1119 - hypothetical protein 1066 51.29 0 1143409..1144650 + 413 157158962 agp EcE24377A_1120 - glucose-1-phosphatase/inositol phosphatase 1067 47.37 0 1144688..1144915 - 75 157158367 - EcE24377A_1121 - hypothetical protein 1068 53.77 0 1144936..1145532 - 198 157158115 wrbA EcE24377A_1122 - TrpR binding protein WrbA 1069 51.72 0 1145905..1146078 + 57 157157480 - EcE24377A_1123 - hypothetical protein 1070 53.72 0 1146161..1147489 - 442 157159382 - EcE24377A_1124 - putative purine permease ycdG 1071 58.38 +1 1147510..1148004 - 164 157158870 - EcE24377A_1125 - putative flavin reductase rutF 1072 55.67 0 1148015..1148605 - 196 157156722 - EcE24377A_1126 - hypothetical protein 1073 58.05 +1 1148615..1149415 - 266 157154886 - EcE24377A_1127 - putative rutD protein 1074 54.01 0 1149423..1149809 - 128 157155569 - EcE24377A_1128 - rutC protein 1075 54.89 0 1149821..1150516 - 231 157158711 - EcE24377A_1129 - putative isochorismatase family protein, rutB 1076 54.57 0 1150513..1151694 - 393 157155454 - EcE24377A_1130 - putative monooxygenase rutA 1077 51.17 0 1151891..1152529 + 212 157158459 rutR EcE24377A_1131 - transcriptional regulator RutR 1078 56.37 +1 1152569..1156531 - 1320 157158674 putA EcE24377A_1132 - trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 1079 35.24 -2 1156586..1156795 + 69 157157996 - EcE24377A_1134 - hypothetical protein 1080 54.21 0 1156954..1158462 + 502 157156407 putP EcE24377A_1135 - sodium/proline symporter 1081 54.51 0 1159004..1159834 + 276 157156355 - EcE24377A_1136 - FTR1 family iron permease 1082 50.89 0 1159892..1161019 + 375 157156898 - EcE24377A_1137 - hypothetical protein 1083 53.46 0 1161025..1162296 + 423 157157331 - EcE24377A_1138 - Tat-translocated enzyme 1084 42.93 -1 1162363..1162560 - 65 157157900 - EcE24377A_1139 - hypothetical protein 1085 44.20 -1 1163753..1164166 - 137 157158963 pgaD EcE24377A_1141 - biofilm PGA synthesis protein PgaD 1086 46.46 0 1164168..1165493 - 441 157157335 pgaC EcE24377A_1142 - N-glycosyltransferase PgaC 1087 44.38 -1 1165486..1167504 - 672 157157853 pgaB EcE24377A_1143 - biofilm PGA synthesis lipoprotein pgaB 1088 47.07 0 1167513..1169936 - 807 157158435 pgaA EcE24377A_1144 - outer membrane protein PgaA 1089 38.23 -2 1170451..1171881 + 476 157158903 - EcE24377A_1145 - diguanylate cyclase 1090 55.13 0 1171922..1172788 - 288 157159400 - EcE24377A_1146 - IS3, transposase orfB 1091 50.00 0 1172785..1173084 - 99 157155285 - EcE24377A_1147 - IS3, transposase orfA 1092 43.99 -1 1173134..1173499 + 121 157155666 - EcE24377A_1148 - hypothetical protein 1093 40.53 -1 1173489..1174475 + 328 157156350 - EcE24377A_1149 - hypothetical protein 1094 39.47 -1 1175217..1175330 - 37 157157820 - EcE24377A_1151 - hypothetical protein 1095 48.37 0 1176344..1177081 + 245 157154960 - EcE24377A_1153 - putative hydrolase 1096 54.05 0 1177105..1177659 + 184 157155138 - EcE24377A_1154 - chaperone TorD 1097 53.66 0 1177761..1178252 + 163 157155603 - EcE24377A_1155 - hypothetical protein 1098 50.24 0 1178316..1179149 - 277 157157085 csgG EcE24377A_1156 - curli production assembly/transport subunit CsgG 1099 41.97 -1 1179176..1179592 - 138 157156394 csgF EcE24377A_1157 - curli assembly protein CsgF 1100 42.82 -1 1179617..1180006 - 129 157156361 csgE EcE24377A_1158 - curli assembly protein CsgE 1101 41.47 -1 1180011..1180661 - 216 157155649 csgD EcE24377A_1159 - DNA-binding transcriptional regulator CsgD 1102 37.35 -2 1181073..1181321 - 82 157155137 - EcE24377A_1160 - hypothetical protein 1103 42.86 -1 1181388..1181870 + 160 157158515 csgB EcE24377A_1161 - curlin minor subunit 1104 51.32 0 1181911..1182366 + 151 157157267 - EcE24377A_1162 - cryptic curlin major subunit 1105 42.64 -1 1182425..1182757 + 110 157156575 csgC EcE24377A_1163 - putative autoagglutination protein 1106 43.59 -1 1182878..1183189 + 103 157156416 - EcE24377A_1164 - hypothetical protein 1107 51.87 0 1183284..1183817 + 177 157155706 - EcE24377A_1165 - hypothetical protein 1108 50.52 0 1183810..1185240 + 476 157156460 - EcE24377A_1166 - phopholipase D 1109 43.87 -1 1185248..1186405 - 385 157156321 mdoC EcE24377A_1167 - glucans biosynthesis protein 1110 47.92 0 1186450..1186593 - 47 157155624 - EcE24377A_1168 - hypothetical protein 1111 49.61 0 1186799..1188334 + 511 157156764 mdoG EcE24377A_1169 - glucan biosynthesis protein G 1112 55.03 0 1188327..1190870 + 847 157159340 mdoH EcE24377A_1170 - glucosyltransferase MdoH 1113 50.44 0 1191043..1191270 + 75 157157394 - EcE24377A_1172 - hypothetical protein 1114 50.13 0 1191271..1191645 - 124 157157935 msyB EcE24377A_1173 - hypothetical protein 1115 52.24 0 1191728..1192954 - 408 157156375 mdtG EcE24377A_1174 - drug efflux system protein MdtG 1116 45.71 0 1192984..1193088 + 34 157156890 - EcE24377A_1175 - hypothetical protein 1117 53.09 0 1193126..1194046 - 306 157155736 htrB EcE24377A_1176 - lipid A biosynthesis lauroyl acyltransferase 1118 49.76 0 1194271..1195323 + 350 157158651 - EcE24377A_1177 - hypothetical protein 1119 47.22 0 1195365..1195940 - 191 157159017 yceI EcE24377A_1178 - hypothetical protein 1120 51.15 0 1195944..1196510 - 188 157157617 - EcE24377A_1179 - nickel-dependent hydrogenase b-type cytochrome subunit 1121 27.21 -2 1196500..1196646 + 48 157157977 - EcE24377A_1180 - hypothetical protein 1122 37.72 -2 1196771..1196884 - 37 157155996 - EcE24377A_1181 - hypothetical protein 1123 52.55 0 1196932..1198050 - 372 157155462 solA EcE24377A_1182 - N-methyltryptophan oxidase 1124 45.35 0 1198165..1198422 - 85 157158397 - EcE24377A_1183 - biofilm formation regulatory protein BssS 1125 47.97 0 1198709..1198954 - 81 157158610 dinI EcE24377A_1184 - DNA damage-inducible protein I 1126 52.91 0 1199028..1200074 - 348 157157354 pyrC EcE24377A_1185 - dihydroorotase 1127 47.06 0 1200180..1200740 - 186 157154992 - EcE24377A_1186 - hypothetical protein 1128 49.07 0 1200874..1201521 - 215 157155546 grxB EcE24377A_1187 - glutaredoxin 2 1129 55.50 0 1201585..1202793 - 402 157155944 mdtH EcE24377A_1188 - multidrug resistance protein MdtH 1130 49.57 0 1203029..1203613 + 194 157156754 rimJ EcE24377A_1189 - ribosomal-protein-S5-alanine N-acetyltransferase 1131 52.31 0 1203624..1204271 + 215 157155438 - EcE24377A_1190 - hypothetical protein 1132 54.76 0 1204273..1205196 + 307 157158513 - EcE24377A_1191 - oxidoreductase family protein 1133 53.65 0 1205306..1206841 + 511 157157105 mviN EcE24377A_1192 - integral membrane protein MviN 1134 48.20 0 1206881..1207297 - 138 157154753 flgN EcE24377A_1193 - flagella synthesis protein FlgN 1135 52.72 0 1207302..1207595 - 97 157157558 flgM EcE24377A_1194 - anti-sigma28 factor FlgM 1136 52.27 0 1207671..1208330 - 219 157158222 flgA EcE24377A_1195 - flagellar basal body P-ring biosynthesis protein FlgA 1137 53.72 0 1208485..1208901 + 138 157157889 flgB EcE24377A_1196 - flagellar basal body rod protein FlgB 1138 52.84 0 1208905..1209309 + 134 157158527 flgC EcE24377A_1197 - flagellar basal body rod protein FlgC 50.48 MEAN 5.64 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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