version 1.0
Escherichia coli E24377A, complete genome - 1..4979619 4749 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1002 45.01 0 1077140..1077841 + 233 157155029 - EcE24377A_1054 - periplasmic pilus chaperone family protein 1003 47.94 0 1077866..1080466 + 866 157156978 fimD2 EcE24377A_1055 - outer membrane usher protein fimD 1004 48.55 0 1080457..1081527 + 356 157156290 - EcE24377A_1056 - putative fimbrial protein 1005 47.15 0 1081539..1082081 + 180 157157964 - EcE24377A_1057 - fimbrial protein 1006 47.67 0 1082089..1082604 + 171 157159298 - EcE24377A_1058 - fimbrial protein 1007 51.49 0 1082570..1083307 + 245 157157571 - EcE24377A_1059 - hypotheical protein 1008 46.88 0 1083418..1084428 + 336 157158241 pyrD EcE24377A_1060 - dihydroorotate dehydrogenase 2 1009 49.57 0 1084566..1085144 + 192 157156639 - EcE24377A_1062 - hypothetical protein 1010 50.54 0 1085141..1086250 - 369 157154931 - EcE24377A_1061 - MOSC domain-containing protein 1011 54.15 0 1086494..1088602 + 702 157155561 - EcE24377A_1063 - 23S rRNA m(2)G2445 methyltransferase 1012 52.62 0 1088614..1090521 + 635 157158467 uup EcE24377A_1064 - ABC transporter ATPase component 1013 52.15 0 1090651..1091904 + 417 157155514 pqiA EcE24377A_1065 - paraquat-inducible protein A 1014 50.21 0 1091909..1093549 + 546 157155915 pqiB EcE24377A_1066 - paraquat-inducible protein B 1015 52.13 0 1093546..1094109 + 187 157156583 - EcE24377A_1067 - hypothetical protein 1016 52.99 0 1094602..1095120 - 172 157157557 fabA EcE24377A_1068 - 3-hydroxydecanoyl-(acyl carrier protein) dehydratase 1017 51.85 0 1095189..1096949 - 586 157158226 - EcE24377A_1069 - S16 family peptidase 1018 46.36 0 1097135..1097587 + 150 157158645 - EcE24377A_1070 - hypothetical protein 1019 53.37 0 1097662..1098714 - 350 157159269 ompA EcE24377A_1071 - outer membrane protein A 1020 36.53 -2 1098869..1099087 + 72 157158822 - EcE24377A_1073 - hypothetical protein 1021 48.24 0 1099071..1099580 - 169 157158913 sulA EcE24377A_1072 - SOS cell division inhibitor 1022 48.10 0 1099799..1100428 + 209 157159114 - EcE24377A_1075 - TfoX family protein 1023 52.20 0 1100391..1102553 - 720 157157855 - EcE24377A_1074 - hypothetical protein 1024 48.32 0 1102563..1103009 - 148 157155098 - EcE24377A_1076 - hypothetical protein 1025 52.70 0 1103132..1105186 + 684 157155618 helD EcE24377A_1077 - DNA helicase IV 1026 52.51 0 1105218..1105676 - 152 157156482 mgsA EcE24377A_1078 - methylglyoxal synthase 1027 50.68 0 1105772..1106434 - 220 157156641 - EcE24377A_1079 - hypothetical protein 1028 55.31 0 1106607..1107020 + 137 157156884 - EcE24377A_1080 - putative CoA-binding protein 1029 56.29 +1 1107065..1107382 - 105 157156189 - EcE24377A_1081 - hemimethylated DNA-binding protein 1030 51.72 0 1107440..1108630 - 396 157155655 - EcE24377A_1082 - hypothetical protein 1031 46.36 0 1109000..1109329 - 109 157155117 tusE EcE24377A_1083 - sulfurtransferase TusE 1032 50.91 0 1109420..1110079 - 219 157159032 - EcE24377A_1084 - hypothetical protein 1033 55.94 0 1110800..1111918 + 372 157155331 hyaA EcE24377A_1087 - nickel-dependent hydrogenase, small subunit 1034 56.74 +1 1111915..1113708 + 597 157158524 hyaB EcE24377A_1088 - hydrogenase 1 large subunit 1035 51.84 0 1113727..1114434 + 235 157157370 hyaC EcE24377A_1089 - hydrogenase 1 b-type cytochrome subunit 1036 57.99 +1 1114431..1115018 + 195 157157868 hyaD EcE24377A_1090 - hydrogenase 1 maturation protease 1037 56.64 +1 1115015..1115413 + 132 157156331 hyaE EcE24377A_1091 - hydrogenase-1 operon protein HyaE 1038 54.66 0 1115410..1116267 + 285 157156865 hyaF EcE24377A_1092 - hydrogenase-1 operon protein HyaF 1039 53.98 0 1116401..1117945 + 514 157155682 appC EcE24377A_1093 - cytochrome bd-II oxidase, subunit I 1040 53.30 0 1117957..1119093 + 378 157158801 appB EcE24377A_1094 - cytochrome bd-II oxidase, subunit II 1041 46.24 0 1119106..1119198 + 30 157158417 - EcE24377A_1095 - putative cyd operon protein YbgT 1042 53.81 0 1119278..1120576 + 432 157159123 appA EcE24377A_1096 - phosphoanhydride phosphorylase 1043 50.53 0 1120691..1122871 - 726 157154890 etk EcE24377A_1097 - cryptic autophosphorylating protein tyrosine kinase Etk 1044 52.13 0 1122891..1123337 - 148 157155359 - EcE24377A_1098 - phosphotyrosine-protein phosphatase 1045 50.56 0 1123325..1124485 - 386 157156218 yccZ EcE24377A_1099 - outer membrane lipoprotein, group 4 capsule (G4C) polysaccharide 1046 51.88 0 1124510..1126606 - 698 157157653 - EcE24377A_1100 - putative lipoprotein 1047 52.07 0 1126606..1127352 - 248 157158170 - EcE24377A_1101 - hypothetical protein 1048 47.75 0 1127349..1127993 - 214 157156862 ymcC EcE24377A_1102 - group 4 capsule (G4C) polysaccharide, lipoprotein YmcC 1049 55.56 0 1128100..1128423 - 107 157156316 - EcE24377A_1103 - putative inner membrane protein 1050 46.95 0 1128847..1129059 - 70 157158514 - EcE24377A_1104 - cold shock DNA-binding protein 1051 44.13 -1 1129345..1129557 + 70 157157933 - EcE24377A_1105 - cold shock protein CspG 1052 39.66 -1 1129951..1130124 + 57 157157632 - EcE24377A_1107 - GnsA/GnsB family transcriptional regulator 1053 39.66 -1 1129966..1130139 - 57 157158171 - EcE24377A_1106 - hypothetical protein 1054 49.07 0 1130172..1131245 - 357 157156552 - EcE24377A_1108 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1055 52.12 0 1131119..1131283 - 54 157156051 - EcE24377A_1109 - hypothetical protein 1056 54.06 0 1131317..1134061 - 914 157158585 torS EcE24377A_1110 - hybrid sensory histidine kinase TorS 1057 52.77 0 1134144..1135172 + 342 157155126 torT EcE24377A_1112 - periplasmic sensory protein associated with the TorRS two-component regulatory system 1058 52.53 0 1135145..1135837 - 230 157158972 torR EcE24377A_1111 - DNA-binding transcriptional regulator TorR 1059 51.24 0 1135967..1137139 + 390 157155491 torC EcE24377A_1113 - cytochrome c-type protein torC 1060 55.44 0 1137139..1139685 + 848 157155850 torA EcE24377A_1114 - trimethylamine-N-oxide reductase 1061 52.83 0 1139682..1140281 + 199 157156231 torD EcE24377A_1116 - chaperone protein TorD 1062 52.67 0 1140221..1140370 - 49 157156655 - EcE24377A_1115 - hypothetical protein 1063 53.59 0 1140374..1140679 - 101 157158092 cbpM EcE24377A_1117 - chaperone-modulator protein CbpM 1064 53.09 0 1140679..1141599 - 306 157157841 cbpA EcE24377A_1118 - curved DNA-binding protein CbpA 1065 33.97 -2 1141859..1143118 + 419 157157400 - EcE24377A_1119 - hypothetical protein 1066 51.29 0 1143409..1144650 + 413 157158962 agp EcE24377A_1120 - glucose-1-phosphatase/inositol phosphatase 1067 47.37 0 1144688..1144915 - 75 157158367 - EcE24377A_1121 - hypothetical protein 1068 53.77 0 1144936..1145532 - 198 157158115 wrbA EcE24377A_1122 - TrpR binding protein WrbA 1069 51.72 0 1145905..1146078 + 57 157157480 - EcE24377A_1123 - hypothetical protein 1070 53.72 0 1146161..1147489 - 442 157159382 - EcE24377A_1124 - putative purine permease ycdG 1071 58.38 +1 1147510..1148004 - 164 157158870 - EcE24377A_1125 - putative flavin reductase rutF 1072 55.67 0 1148015..1148605 - 196 157156722 - EcE24377A_1126 - hypothetical protein 1073 58.05 +1 1148615..1149415 - 266 157154886 - EcE24377A_1127 - putative rutD protein 1074 54.01 0 1149423..1149809 - 128 157155569 - EcE24377A_1128 - rutC protein 1075 54.89 0 1149821..1150516 - 231 157158711 - EcE24377A_1129 - putative isochorismatase family protein, rutB 1076 54.57 0 1150513..1151694 - 393 157155454 - EcE24377A_1130 - putative monooxygenase rutA 1077 51.17 0 1151891..1152529 + 212 157158459 rutR EcE24377A_1131 - transcriptional regulator RutR 1078 56.37 +1 1152569..1156531 - 1320 157158674 putA EcE24377A_1132 - trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 1079 35.24 -2 1156586..1156795 + 69 157157996 - EcE24377A_1134 - hypothetical protein 1080 54.21 0 1156954..1158462 + 502 157156407 putP EcE24377A_1135 - sodium/proline symporter 1081 54.51 0 1159004..1159834 + 276 157156355 - EcE24377A_1136 - FTR1 family iron permease 1082 50.89 0 1159892..1161019 + 375 157156898 - EcE24377A_1137 - hypothetical protein 1083 53.46 0 1161025..1162296 + 423 157157331 - EcE24377A_1138 - Tat-translocated enzyme 1084 42.93 -1 1162363..1162560 - 65 157157900 - EcE24377A_1139 - hypothetical protein 1085 44.20 -1 1163753..1164166 - 137 157158963 pgaD EcE24377A_1141 - biofilm PGA synthesis protein PgaD 1086 46.46 0 1164168..1165493 - 441 157157335 pgaC EcE24377A_1142 - N-glycosyltransferase PgaC 1087 44.38 -1 1165486..1167504 - 672 157157853 pgaB EcE24377A_1143 - biofilm PGA synthesis lipoprotein pgaB 1088 47.07 0 1167513..1169936 - 807 157158435 pgaA EcE24377A_1144 - outer membrane protein PgaA 1089 38.23 -2 1170451..1171881 + 476 157158903 - EcE24377A_1145 - diguanylate cyclase 1090 55.13 0 1171922..1172788 - 288 157159400 - EcE24377A_1146 - IS3, transposase orfB 1091 50.00 0 1172785..1173084 - 99 157155285 - EcE24377A_1147 - IS3, transposase orfA 1092 43.99 -1 1173134..1173499 + 121 157155666 - EcE24377A_1148 - hypothetical protein 1093 40.53 -1 1173489..1174475 + 328 157156350 - EcE24377A_1149 - hypothetical protein 1094 39.47 -1 1175217..1175330 - 37 157157820 - EcE24377A_1151 - hypothetical protein 1095 48.37 0 1176344..1177081 + 245 157154960 - EcE24377A_1153 - putative hydrolase 1096 54.05 0 1177105..1177659 + 184 157155138 - EcE24377A_1154 - chaperone TorD 1097 53.66 0 1177761..1178252 + 163 157155603 - EcE24377A_1155 - hypothetical protein 1098 50.24 0 1178316..1179149 - 277 157157085 csgG EcE24377A_1156 - curli production assembly/transport subunit CsgG 1099 41.97 -1 1179176..1179592 - 138 157156394 csgF EcE24377A_1157 - curli assembly protein CsgF 1100 42.82 -1 1179617..1180006 - 129 157156361 csgE EcE24377A_1158 - curli assembly protein CsgE 1101 41.47 -1 1180011..1180661 - 216 157155649 csgD EcE24377A_1159 - DNA-binding transcriptional regulator CsgD 50.48 MEAN 5.64 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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