version 1.0
Escherichia coli APEC O1, complete genome - 1..5082025 4428 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 392 50.68 0 466371..467327 - 318 117622692 cyoA APECO1_1579 - cytochrome o ubiquinol oxidase subunit II 393 53.66 0 467786..469261 - 491 117622693 ampG APECO1_1578 - muropeptide transporter 394 50.37 0 469305..469985 - 226 117622694 yajG APECO1_1577 - hypothetical protein 395 48.43 0 470188..470505 + 105 162317585 bolA APECO1_1576 - transcriptional regulator BolA 396 51.32 0 470849..472138 + 429 117622696 tig APECO1_1575 - trigger factor 397 50.16 0 472393..473016 + 207 117622697 clpP APECO1_1574 - ATP-dependent Clp protease proteolytic subunit 398 51.92 0 473142..474416 + 424 117622698 clpX APECO1_1573 - ATP-dependent protease ATP-binding subunit 399 52.38 0 474559..476958 + 799 117622699 lon APECO1_1572 - DNA-binding ATP-dependent protease La 400 49.08 0 477167..477439 + 90 117622700 hupB APECO1_1571 - transcriptional regulator HU subunit beta 401 52.14 0 477631..479502 + 623 117622701 ppiD APECO1_1570 - peptidyl-prolyl cis-trans isomerase (rotamase D) 402 54.03 0 479653..480024 + 123 117622702 ybaV APECO1_1569 - hypothetical protein 403 46.12 -1 480130..480528 + 132 117622703 ybaW APECO1_1568 - hypothetical protein 404 51.58 0 480580..481275 - 231 117622704 - APECO1_1567 - queuosine biosynthesis protein QueC 405 52.85 0 481340..483040 - 566 117622705 ybaE APECO1_1566 - hypothetical protein 406 50.54 0 483128..483958 + 276 117622706 cof APECO1_1565 - hypothetical protein 407 48.53 0 483958..484569 + 203 117622707 ybaO APECO1_1564 - putative transcriptional regulator YbaO 408 53.07 0 484599..486371 + 590 117622708 mdlA APECO1_1563 - putative multidrug transporter membrane\ATP-binding components 409 56.01 +1 486250..488145 + 631 117622709 mdlB APECO1_1562 - putative multidrug transporter membrane\ATP-binding components 410 48.85 0 488188..488664 + 158 117622710 glnK APECO1_1561 - glutamine synthetase activity regulation protein 411 55.94 +1 488694..489980 + 428 117622711 amtB APECO1_1560 - ammonium transporter 412 52.15 0 490029..490889 - 286 117622712 tesB APECO1_1559 - acyl-CoA thioesterase II 413 54.45 0 491107..491679 + 190 117622713 ybaY APECO1_1558 - lipoprotein 414 54.62 0 491710..492099 - 129 117622714 ybaZ APECO1_1557 - hypothetical protein 415 48.59 0 492400..492753 + 117 117622715 - APECO1_1556 - hypothetical protein 416 47.98 0 492795..494351 - 518 117622716 ylaB APECO1_1555 - hypothetical protein 417 46.67 0 494509..495018 - 169 117622717 ylaC APECO1_1554 - hypothetical protein 418 47.64 0 495095..495646 - 183 117622718 maa APECO1_15532 - maltose O-acetyltransferase 419 39.29 -2 495820..496239 - 139 117622719 hha APECO1_1553 - Hha protein 420 53.43 0 496983..500132 - 1049 117622720 acrB APECO1_1552 - acridine efflux pump 421 53.69 0 500155..501348 - 397 117622721 acrA APECO1_1551 - acriflavine resistance protein A precursor 422 45.68 -1 501490..502137 + 215 117622722 acrR APECO1_1550 - DNA-binding transcriptional repressor AcrR 423 51.86 0 502265..505627 + 1120 117622723 kefA APECO1_1549 - potassium efflux protein KefA 424 58.71 +1 506014..506541 - 175 117622724 priC APECO1_1548 - primosomal replication protein N'' 425 51.32 0 506611..506988 + 125 117622725 ybaN APECO1_1547 - hypothetical protein 426 53.50 0 507108..507692 + 194 117622726 apt APECO1_1546 - adenine phosphoribosyltransferase 427 57.30 +1 507821..509752 + 643 117622727 dnaX APECO1_1545 - DNA polymerase III subunits gamma and tau 428 52.42 0 509805..510134 + 109 117622728 - APECO1_1544 - hypothetical protein 429 56.93 +1 510134..510739 + 201 117622729 recR APECO1_1543 - recombination protein RecR 430 52.80 0 510849..512723 + 624 117622730 htpG APECO1_1542 - heat shock protein 90 431 51.42 0 512847..513548 + 233 117622731 adk APECO1_1541 - adenylate kinase 432 53.37 0 513680..514642 + 320 117622732 hemH APECO1_1540 - ferrochelatase 433 51.46 0 514639..515598 - 319 117622733 ybaC APECO1_1539 - acetyl esterase 434 52.41 0 515750..517054 + 434 117622734 gsk APECO1_1538 - inosine-guanosine kinase 435 55.46 0 517184..518860 - 558 117622735 ybaL APECO1_1537 - putative cation:proton antiport protein 436 52.17 0 519099..520319 - 406 117622736 fsr APECO1_1536 - fosmidomycin resistance protein 437 50.64 0 520537..522189 + 550 117622737 ushA APECO1_1535 - bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor 438 39.88 -2 522227..522730 - 167 117622738 - APECO1_1534 - hypothetical protein 439 46.07 -1 522727..523527 - 266 117622739 - APECO1_1533 - hypothetical protein 440 50.00 0 523551..524030 - 159 117622740 ybaK APECO1_1532 - hypothetical protein 441 53.96 0 524234..525028 - 264 117622741 ybaP APECO1_1531 - putative ligase 442 41.91 -1 525161..525463 + 100 117622742 - APECO1_1530 - hypothetical protein 443 45.03 -1 525499..525840 + 113 117622743 ybaQ APECO1_1529 - DNA-binding transcriptional regulator 444 58.32 +1 525898..528402 - 834 117622744 ybaR APECO1_1528 - copper exporting ATPase 445 53.05 0 528664..529596 + 310 117622745 ybaS APECO1_1527 - glutaminase 446 53.75 0 529599..530891 + 430 117622746 ybaT APECO1_1526 - transporter 447 56.62 +1 531016..531423 + 135 117622747 ybbI APECO1_1525 - DNA-binding transcriptional regulator CueR 448 43.50 -1 531627..532049 - 140 117622748 - APECO1_1524 - hypothetical protein 449 48.48 0 532135..533151 - 338 117622749 - APECO1_1523 - adhesin/invasin-like protein 450 42.70 -1 533518..533880 + 120 117622750 - APECO1_1522 - hypothetical protein 451 57.52 +1 533983..534441 - 152 117622751 ybbJ APECO1_1521 - hypothetical protein 452 52.61 0 534438..535355 - 305 117622752 ybbK APECO1_1520 - putative protease YbbK 453 45.43 -1 535501..536178 + 225 117622753 ybbL APECO1_1519 - putative ABC transporter ATP-binding protein YbbL 454 46.22 0 536138..536944 + 268 117622754 ybbM APECO1_1518 - putative metal resistance protein 455 55.33 0 537007..537897 - 296 117622755 ybbN APECO1_1517 - thioredoxin domain-containing protein 456 53.70 0 537922..538731 - 269 117622756 ybbO APECO1_1516 - short chain dehydrogenase 457 52.97 0 538721..539377 - 218 117622757 tesA APECO1_1515 - multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 458 55.75 +1 539315..540001 + 228 117622758 ybbA APECO1_1513 - putative ABC transporter ATP-binding protein YbbA 459 57.81 +1 539998..542412 + 804 117622759 ybbP APECO1_1512 - hypothetical protein 460 55.25 0 542471..543565 - 364 117622760 ybbB APECO1_1511 - tRNA 2-selenouridine synthase 461 52.32 0 543634..544560 - 308 117622761 ybbS APECO1_1510 - DNA-binding transcriptional activator AllS 462 50.10 0 544790..545272 + 160 117622762 allA APECO1_1509 - ureidoglycolate hydrolase 463 52.94 0 545350..546165 + 271 117622763 ybbU APECO1_1508 - DNA-binding transcriptional repressor AllR 464 52.51 0 546165..548036 + 623 117622764 gcl APECO1_1507 - glyoxylate carboligase 465 44.27 -1 548049..548825 + 258 117622765 hyi APECO1_1506 - hydroxypyruvate isomerase 466 50.63 0 548925..549803 + 292 117622766 ybbQ APECO1_1505 - 2-hydroxy-3-oxopropionate reductase 467 47.22 0 549973..551427 + 484 117622767 ybbW APECO1_1504 - allantoin permease 468 51.54 0 551487..552848 + 453 117622768 allB APECO1_1503 - allantoinase 469 51.45 0 552898..554205 + 435 117622769 ybbY APECO1_1502 - putative purine permease YbbY 470 56.20 +1 554227..555372 + 381 117622770 glxK APECO1_1501 - glycerate kinase II 471 46.18 -1 555501..556286 - 261 117622771 ylbA APECO1_1500 - hypothetical protein 472 51.70 0 556297..557532 - 411 117622772 allC APECO1_1499 - allantoate amidohydrolase 473 52.29 0 557554..558603 - 349 117622773 allD APECO1_1498 - ureidoglycolate dehydrogenase 474 55.58 0 558920..560587 + 555 117622774 fdrA APECO1_1497 - membrane protein FdrA 475 57.30 +1 560597..561856 + 419 117622775 ylbE APECO1_1496 - hypothetical protein 476 57.60 +1 561867..562682 + 271 117622776 ylbF APECO1_1495 - hypothetical protein 477 57.38 +1 562679..563572 + 297 117622777 arcC APECO1_1494 - carbamate kinase 478 56.09 +1 563725..564792 - 355 117622778 purK APECO1_1493 - phosphoribosylaminoimidazole carboxylase ATPase subunit 479 58.24 +1 564789..565298 - 169 117622779 purE APECO1_1492 - phosphoribosylaminoimidazole carboxylase catalytic subunit 480 44.55 -1 565394..565723 - 109 117622780 - APECO1_1491 - hypothetical protein 481 53.80 0 565834..566556 - 240 117622781 ybbF APECO1_1490 - UDP-2,3-diacylglucosamine hydrolase 482 54.33 0 567227..568612 + 461 117622783 cysS APECO1_1488 - cysteinyl-tRNA synthetase 483 52.87 0 568648..569169 - 173 117622784 - APECO1_1487 - hypothetical protein 484 54.56 0 569491..570357 - 288 117622785 folD APECO1_1486 - bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 485 48.03 0 570712..571092 - 126 117622786 intD APECO1_1485 - prophage DLP12 integrase 486 47.79 0 571040..571447 - 135 117622787 intD APECO1_1484 - prophage DLP12 integrase 487 40.99 -2 571757..572422 - 221 117622788 ybcY APECO1_1483 - hypothetical protein 488 43.50 -1 572657..573610 - 317 117622789 ompT APECO1_1482 - outer membrane protease 489 51.74 0 574268..575158 - 296 117622790 ybcH APECO1_1481 - hypothetical protein 490 55.13 0 575159..578131 - 990 117622791 nfrA APECO1_1480 - bacteriophage N4 receptor, outer membrane subunit 491 52.37 0 578118..580355 - 745 117622792 nfrB APECO1_1479 - bacteriophage N4 adsorption protein B 50.94 MEAN 4.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0