version 1.0
Escherichia coli APEC O1, complete genome - 1..5082025 4428 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 4149 54.74 0 4766031..4766357 - 108 117626480 - APECO1_2258 - hypothetical protein 4150 54.96 0 4766398..4766901 - 167 117626481 insB APECO1_2257 - IS1 InsB protein 4151 52.17 0 4766820..4767095 - 91 117626482 insA APECO1_2256 - IS1 InsA protein 4152 45.62 -1 4767625..4768698 - 357 117626483 shiA APECO1_2255 - ShiA-like protein 4153 48.74 0 4768924..4770189 - 421 117626484 int APECO1_2254 - Int (putative P4-type integrase) 4154 53.50 0 4770569..4771168 - 199 117626485 yjdC APECO1_2253 - putative transcriptional regulator 4155 53.29 0 4771181..4772959 - 592 117626486 dipZ APECO1_2252 - thiol:disulfide interchange protein precursor 4156 52.38 0 4773308..4774609 - 433 117626487 dcuA APECO1_2251 - anaerobic C4-dicarboxylate transporter 4157 48.79 0 4774727..4776208 - 493 117626488 aspA APECO1_2250 - aspartate ammonia-lyase 4158 50.00 0 4776599..4776976 + 125 117626489 fxsA APECO1_2249 - FxsA 4159 51.71 0 4776992..4778308 - 438 117626490 yjeH APECO1_2248 - inner membrane protein YjeH 4160 50.93 0 4778391..4778714 - 107 117626491 - APECO1_2247 - hypothetical protein 4161 53.07 0 4778861..4780507 + 548 117626492 groEL APECO1_2246 - chaperonin GroEL 4162 54.52 0 4780612..4780998 + 128 117626493 yjeI APECO1_2245 - hypothetical protein 4163 45.29 -1 4781048..4781917 - 289 117626494 yjeJ APECO1_2244 - hypothetical protein 4164 53.16 0 4782152..4783180 - 342 117626495 yjeK APECO1_2243 - putative lysine aminomutase 4165 49.74 0 4783222..4783788 + 188 117626496 efp APECO1_2242 - elongation factor P 4166 53.14 0 4784398..4784715 + 105 117626497 sugE APECO1_2241 - quaternary ammonium compound-resistance protein SugE 4167 53.37 0 4784712..4785245 - 177 117626498 blc APECO1_2240 - outer membrane lipoprotein Blc 4168 49.64 0 4785334..4786596 - 420 117626499 ampC APECO1_2239 - beta-lactamase 4169 53.61 0 4786530..4786889 - 119 117626500 frdD APECO1_2238 - fumarate reductase subunit D 4170 49.24 0 4786900..4787295 - 131 117626501 frdC APECO1_2237 - fumarate reductase subunit C 4171 53.99 0 4787306..4788031 - 241 117626502 frdB APECO1_2236 - fumarate reductase iron-sulfur subunit 4172 56.33 +1 4788033..4789841 - 602 117626503 frdA APECO1_2235 - fumarate reductase flavoprotein subunit 4173 52.18 0 4790136..4791143 + 335 117626504 yjeA APECO1_2234 - lysyl-tRNA synthetase 4174 46.80 0 4791320..4792864 + 514 117626505 yjeM APECO1_2233 - putative transporter 4175 49.21 0 4792927..4793241 + 104 117626506 yjeN APECO1_2232 - hypothetical protein 4176 47.62 0 4793238..4793552 + 104 117626507 yjeO APECO1_2231 - hypothetical protein 4177 55.69 +1 4793583..4796906 - 1107 117626508 yjeP APECO1_2230 - hypothetical protein 4178 54.20 0 4796970..4797851 + 293 117626509 - APECO1_2229 - hypothetical protein 4179 53.35 0 4797993..4799006 - 337 117626510 yjeQ APECO1_2228 - ribosome-associated GTPase 4180 52.20 0 4799071..4799685 + 204 117626511 orn APECO1_2227 - oligoribonuclease 4181 53.12 0 4800464..4801711 - 415 117626513 yjeS APECO1_2225 - putative electron transport protein YjeS 4182 57.11 +1 4801602..4803149 + 515 117626514 yjeF APECO1_2224 - hypothetical protein 4183 51.52 0 4803121..4803582 + 153 117626515 yjeE APECO1_2223 - putative ATPase 4184 54.56 0 4803601..4804938 + 445 117626516 amiB APECO1_2222 - N-acetylmuramoyl-l-alanine amidase II 4185 56.06 +1 4804948..4806795 + 615 117626517 mutL APECO1_2221 - DNA mismatch repair protein 4186 52.89 0 4806788..4807738 + 316 117626518 miaA APECO1_2220 - tRNA delta(2)-isopentenylpyrophosphate transferase 4187 48.22 0 4807824..4808132 + 102 117626519 hfq APECO1_2219 - RNA-binding protein Hfq 4188 54.54 0 4808277..4809488 + 403 117626520 hflX APECO1_2218 - putative GTPase HflX 4189 56.27 +1 4809574..4810833 + 419 117626521 hflK APECO1_2217 - FtsH protease regulator HflK 4190 52.34 0 4810836..4811840 + 334 117626522 hflC APECO1_2216 - FtsH protease regulator HflC 4191 53.89 0 4812223..4813521 + 432 117626523 purA APECO1_2215 - adenylosuccinate synthetase 4192 48.36 0 4813726..4814151 + 141 117626524 yjeB APECO1_2214 - transcriptional repressor NsrR 4193 54.63 0 4814148..4816631 + 827 117626525 rnr APECO1_2213 - exoribonuclease R 4194 55.46 0 4816723..4817454 + 243 117626526 yjfH APECO1_2212 - 23S rRNA (guanosine-2'-O-)-methyltransferase 4195 38.81 -2 4817581..4817982 + 133 117626527 yjfI APECO1_2211 - hypothetical protein 4196 50.93 0 4818001..4818699 + 232 117626528 yjfJ APECO1_2210 - transcriptional regulator effector protein 4197 47.27 0 4818749..4819408 + 219 117626529 yjfK APECO1_2209 - hypothetical protein 4198 44.58 -1 4819345..4819824 + 159 117626530 yjfL APECO1_2208 - hypothetical protein 4199 49.30 0 4819834..4820472 + 212 117626531 yjfM APECO1_2207 - hypothetical protein 4200 52.41 0 4820475..4821638 + 387 117626532 yjfC APECO1_2206 - putative synthetase/amidase 4201 54.78 0 4821707..4823347 + 546 117626533 aidB APECO1_2205 - isovaleryl CoA dehydrogenase 4202 51.49 0 4823464..4823766 - 100 117626534 yjfN APECO1_2204 - hypothetical protein 4203 47.32 0 4823888..4824316 - 142 117626535 - APECO1_2203 - hypothetical protein 4204 53.20 0 4824399..4825148 + 249 117626536 - APECO1_2202 - esterase 4205 50.40 0 4825145..4825900 - 251 117626537 yjfQ APECO1_2201 - transcriptional repressor UlaR 4206 51.91 0 4826008..4827078 - 356 117626538 ulaG APECO1_2200 - putative L-ascorbate 6-phosphate lactonase 4207 52.72 0 4827427..4828824 + 465 162317558 ulaA APECO1_2199 - ascorbate-specific PTS system enzyme IIC 4208 55.86 +1 4829161..4829493 - 110 117626541 - APECO1_2197 - hypothetical protein 4209 56.07 +1 4829633..4830283 + 216 162317557 ulaD APECO1_2196 - 3-keto-L-gulonate-6-phosphate decarboxylase 4210 56.26 +1 4830293..4831147 + 284 117626543 ulaE APECO1_2195 - L-xylulose 5-phosphate 3-epimerase 4211 55.90 +1 4831147..4831833 + 228 117626544 sgaE APECO1_2194 - L-ribulose-5-phosphate 4-epimerase 4212 47.10 0 4831962..4832237 - 91 117626545 yjfY APECO1_2193 - hypothetical protein 4213 52.78 0 4832565..4832960 + 131 117626546 rpsF APECO1_2192 - 30S ribosomal protein S6 4214 52.06 0 4832967..4833281 + 104 117626547 priB APECO1_2191 - primosomal replication protein N 4215 49.78 0 4833555..4834004 + 149 117626548 rplI APECO1_2190 - 50S ribosomal protein L9 4216 44.51 -1 4834406..4834897 + 163 117626549 - APECO1_2189 - hypothetical protein 4217 44.92 -1 4834900..4836168 + 422 117626550 - APECO1_2188 - hypothetical protein 4218 46.40 0 4836311..4837588 - 425 117626551 - APECO1_2187 - putative hexuronate transporter 4219 51.91 0 4837681..4839753 - 690 117626552 - APECO1_2186 - putative oxidoreductase 4220 52.85 0 4839750..4841291 - 513 117626553 - APECO1_2185 - putative acetyl-CoA:acetoacetyl-CoA transferase 4221 49.55 0 4841301..4842077 - 258 117626554 - APECO1_2184 - hypothetical protein 4222 54.65 0 4842080..4842928 - 282 117626555 - APECO1_2183 - hypothetical protein 4223 53.03 0 4842938..4843729 - 263 162317556 - APECO1_2182 - 3-ketoacyl-(acyl-carrier-protein) reductase 4224 41.23 -2 4843905..4844588 + 227 117626557 - APECO1_2181 - putative transcriptional regulator 4225 55.26 0 4844572..4845246 - 224 117626558 ytfB APECO1_2180 - putative cell envelope opacity-associated protein 4226 53.08 0 4845269..4846048 + 259 117626559 fklB APECO1_2179 - peptidyl-prolyl cis-trans isomerase 4227 51.73 0 4846357..4847769 + 470 117626560 cycA APECO1_2178 - D-alanine/D-serine/glycine permease 4228 53.09 0 4847814..4848476 - 220 117626561 ytfE APECO1_2177 - cell morphogenesis/cell wall metabolism regulator 4229 55.79 +1 4848584..4849558 - 324 117626562 ytfF APECO1_2176 - putative inner membrane protein 4230 53.54 0 4849657..4850517 - 286 117626563 ytfG APECO1_2175 - hypothetical protein 4231 51.63 0 4850495..4850986 + 163 117626564 ytfH APECO1_2174 - hypothetical protein 4232 49.82 0 4851115..4853067 - 650 117626565 cpdB APECO1_2173 - bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein 4233 55.06 0 4853248..4853988 + 246 117626566 cysQ APECO1_2172 - PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase 4234 50.90 0 4853978..4854535 - 185 117626567 ytfJ APECO1_2171 - hypothetical protein 4235 50.00 0 4855144..4856487 - 447 117626568 ytfL APECO1_2170 - putative transport protein 4236 54.95 0 4856810..4857475 - 221 117626569 msrA APECO1_2169 - methionine sulfoxide reductase A 4237 53.81 0 4857654..4859387 + 577 117626570 ytfM APECO1_2168 - putative outer membrane protein and surface antigen 4238 55.34 0 4859384..4863163 + 1259 117626571 ytfN APECO1_2167 - hypothetical protein 4239 50.88 0 4863166..4863507 + 113 117626572 - APECO1_2166 - hypothetical protein 4240 51.22 0 4863887..4864417 - 176 117626573 ppa APECO1_2165 - inorganic pyrophosphatase 4241 50.05 0 4864727..4865683 + 318 117626574 ytfQ APECO1_2164 - ABC transporter periplasmic binding protein YtfQ 4242 55.42 0 4865823..4867325 + 500 117626575 ytfR APECO1_2163 - putative ATP-binding component of a transport system 4243 57.12 +1 4867336..4868361 + 341 117626576 ytfT APECO1_2162 - putative ABC transporter permease protein YtfT 4244 51.41 0 4868348..4869343 + 331 117626577 yjfF APECO1_2161 - inner membrane ABC transporter permease protein YjfF 4245 50.95 0 4869376..4870374 - 332 117626578 fbp APECO1_2160 - fructose-1,6-bisphosphatase 4246 55.17 0 4870550..4871923 + 457 117626579 mpl APECO1_2159 - UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelat e ligase 4247 52.90 0 4872081..4872632 - 183 117626580 yjgA APECO1_2158 - hypothetical protein 4248 54.69 0 4872726..4874078 + 450 117626581 pmbA APECO1_2157 - peptidase PmbA 50.94 MEAN 4.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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