version 1.0
Escherichia coli APEC O1, complete genome - 1..5082025 4428 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 4109 55.56 0 4727190..4727711 - 173 117626440 - APECO1_2298 - hypothetical protein 4110 58.33 +1 4727739..4728278 - 179 117626441 - APECO1_2297 - hypothetical protein 4111 52.43 0 4728503..4728790 + 95 117626442 - APECO1_2296 - hypothetical protein 4112 54.08 0 4728764..4729669 - 301 117626443 - APECO1_2295 - hypothetical protein 4113 46.62 0 4729806..4730723 - 305 117626444 - APECO1_2294 - putative pyruvate-formate lyase-activating enzyme 4114 51.94 0 4730832..4733384 - 850 117626445 - APECO1_2293 - putative pyruvate formate-lyase 4115 43.74 -1 4733433..4734143 - 236 117626446 - APECO1_2292 - putative peptidase 4116 53.63 0 4734342..4735868 - 508 117626447 eutE APECO1_2291 - ethanolamine utilization protein EutE 4117 51.02 0 4735929..4736714 - 261 117626448 eutL APECO1_2290 - putative propanediol utilization protein 4118 50.35 0 4736736..4737017 - 93 117626449 pduA APECO1_2289 - putative propanediol utilization protein PduA 4119 53.75 0 4737302..4738609 - 435 117626450 - APECO1_2288 - propionate/acetate kinase 4120 54.82 0 4738527..4739024 - 165 117626451 pduO APECO1_2287 - putative propanediol utilization protein: B12 related 4121 53.33 0 4739052..4739321 - 89 117626452 eutN APECO1_2286 - ethanolamine utilization protein EutN 4122 51.79 0 4739333..4740058 - 241 117626453 - APECO1_2285 - hypothetical protein 4123 54.94 0 4740042..4740800 - 252 117626454 eutJ APECO1_2284 - ethanolamine utilization protein EutJ 4124 56.33 +1 4740855..4741541 - 228 117626455 - APECO1_2283 - putative propanediol utilization protein 4125 52.55 0 4741681..4742799 - 372 117626456 - APECO1_2282 - putative iron-containing alcohol dehydrogenase 4126 54.81 0 4743291..4743695 - 134 117626457 - APECO1_2281 - hypothetical protein 4127 49.28 0 4743929..4744204 + 91 117626458 - APECO1_2280 - hypothetical protein 4128 51.09 0 4744842..4745252 + 136 117626459 - APECO1_2279 - putative hemolysin activator protein 4129 53.12 0 4745339..4745722 + 127 117626460 - APECO1_2278 - hypothetical protein 4130 38.01 -2 4745961..4747415 + 484 117626461 - APECO1_2277 - hypothetical protein 4131 43.64 -1 4747547..4749331 + 594 117626462 - APECO1_2276 - KAP family protein 4132 46.61 0 4749331..4750083 + 250 117626463 - APECO1_2275 - hypothetical protein 4133 42.95 -1 4750065..4751384 + 439 117626464 - APECO1_2274 - hypothetical protein 4134 43.11 -1 4751381..4752106 + 241 117626465 - APECO1_2273 - putative TatD-related deoxyribonuclease 4135 42.19 -1 4752659..4753234 - 191 117626466 - APECO1_2272 - hypothetical protein 4136 46.35 0 4753242..4754570 - 442 117626467 - APECO1_2271 - hypothetical protein 4137 50.31 0 4754911..4755723 - 270 117626468 - APECO1_2270 - transposase insF for insertion sequence IS3A/B/C/D/E/fA 4138 44.75 -1 4755780..4756103 - 107 117626469 insN APECO1_2269 - transposase InsN for insertion sequence element IS911B 4139 51.59 0 4756137..4756514 - 125 117626470 - APECO1_2268 - hypothetical protein 4140 53.06 0 4757137..4757496 - 119 117626471 insB APECO1_2267 - IS1 InsB protein 4141 47.99 0 4757523..4757795 - 90 117626472 insA APECO1_2266 - IS1 InsA protein 4142 48.84 0 4758048..4759517 + 489 117626473 - APECO1_2265 - putative antiporter 4143 51.43 0 4759622..4761991 + 789 117626474 - APECO1_2264 - hypothetical protein 4144 48.53 0 4762066..4763565 + 499 117626475 - APECO1_2263 - putative amino acid antiporter 4145 52.17 0 4763708..4763983 + 91 117626476 insA APECO1_2262 - IS1 InsA protein 4146 54.96 0 4763902..4764405 + 167 117626477 insB APECO1_2261 - IS1 InsB protein 4147 38.04 -2 4764872..4765423 - 183 117626478 papX APECO1_2260 - putative regulator PapX protein 4148 43.17 -1 4765590..4765955 - 121 117626479 - APECO1_2259 - hypothetical protein 4149 54.74 0 4766031..4766357 - 108 117626480 - APECO1_2258 - hypothetical protein 4150 54.96 0 4766398..4766901 - 167 117626481 insB APECO1_2257 - IS1 InsB protein 4151 52.17 0 4766820..4767095 - 91 117626482 insA APECO1_2256 - IS1 InsA protein 4152 45.62 -1 4767625..4768698 - 357 117626483 shiA APECO1_2255 - ShiA-like protein 4153 48.74 0 4768924..4770189 - 421 117626484 int APECO1_2254 - Int (putative P4-type integrase) 4154 53.50 0 4770569..4771168 - 199 117626485 yjdC APECO1_2253 - putative transcriptional regulator 4155 53.29 0 4771181..4772959 - 592 117626486 dipZ APECO1_2252 - thiol:disulfide interchange protein precursor 4156 52.38 0 4773308..4774609 - 433 117626487 dcuA APECO1_2251 - anaerobic C4-dicarboxylate transporter 4157 48.79 0 4774727..4776208 - 493 117626488 aspA APECO1_2250 - aspartate ammonia-lyase 4158 50.00 0 4776599..4776976 + 125 117626489 fxsA APECO1_2249 - FxsA 4159 51.71 0 4776992..4778308 - 438 117626490 yjeH APECO1_2248 - inner membrane protein YjeH 4160 50.93 0 4778391..4778714 - 107 117626491 - APECO1_2247 - hypothetical protein 4161 53.07 0 4778861..4780507 + 548 117626492 groEL APECO1_2246 - chaperonin GroEL 4162 54.52 0 4780612..4780998 + 128 117626493 yjeI APECO1_2245 - hypothetical protein 4163 45.29 -1 4781048..4781917 - 289 117626494 yjeJ APECO1_2244 - hypothetical protein 4164 53.16 0 4782152..4783180 - 342 117626495 yjeK APECO1_2243 - putative lysine aminomutase 4165 49.74 0 4783222..4783788 + 188 117626496 efp APECO1_2242 - elongation factor P 4166 53.14 0 4784398..4784715 + 105 117626497 sugE APECO1_2241 - quaternary ammonium compound-resistance protein SugE 4167 53.37 0 4784712..4785245 - 177 117626498 blc APECO1_2240 - outer membrane lipoprotein Blc 4168 49.64 0 4785334..4786596 - 420 117626499 ampC APECO1_2239 - beta-lactamase 4169 53.61 0 4786530..4786889 - 119 117626500 frdD APECO1_2238 - fumarate reductase subunit D 4170 49.24 0 4786900..4787295 - 131 117626501 frdC APECO1_2237 - fumarate reductase subunit C 4171 53.99 0 4787306..4788031 - 241 117626502 frdB APECO1_2236 - fumarate reductase iron-sulfur subunit 4172 56.33 +1 4788033..4789841 - 602 117626503 frdA APECO1_2235 - fumarate reductase flavoprotein subunit 4173 52.18 0 4790136..4791143 + 335 117626504 yjeA APECO1_2234 - lysyl-tRNA synthetase 4174 46.80 0 4791320..4792864 + 514 117626505 yjeM APECO1_2233 - putative transporter 4175 49.21 0 4792927..4793241 + 104 117626506 yjeN APECO1_2232 - hypothetical protein 4176 47.62 0 4793238..4793552 + 104 117626507 yjeO APECO1_2231 - hypothetical protein 4177 55.69 +1 4793583..4796906 - 1107 117626508 yjeP APECO1_2230 - hypothetical protein 4178 54.20 0 4796970..4797851 + 293 117626509 - APECO1_2229 - hypothetical protein 4179 53.35 0 4797993..4799006 - 337 117626510 yjeQ APECO1_2228 - ribosome-associated GTPase 4180 52.20 0 4799071..4799685 + 204 117626511 orn APECO1_2227 - oligoribonuclease 4181 53.12 0 4800464..4801711 - 415 117626513 yjeS APECO1_2225 - putative electron transport protein YjeS 4182 57.11 +1 4801602..4803149 + 515 117626514 yjeF APECO1_2224 - hypothetical protein 4183 51.52 0 4803121..4803582 + 153 117626515 yjeE APECO1_2223 - putative ATPase 4184 54.56 0 4803601..4804938 + 445 117626516 amiB APECO1_2222 - N-acetylmuramoyl-l-alanine amidase II 4185 56.06 +1 4804948..4806795 + 615 117626517 mutL APECO1_2221 - DNA mismatch repair protein 4186 52.89 0 4806788..4807738 + 316 117626518 miaA APECO1_2220 - tRNA delta(2)-isopentenylpyrophosphate transferase 4187 48.22 0 4807824..4808132 + 102 117626519 hfq APECO1_2219 - RNA-binding protein Hfq 4188 54.54 0 4808277..4809488 + 403 117626520 hflX APECO1_2218 - putative GTPase HflX 4189 56.27 +1 4809574..4810833 + 419 117626521 hflK APECO1_2217 - FtsH protease regulator HflK 4190 52.34 0 4810836..4811840 + 334 117626522 hflC APECO1_2216 - FtsH protease regulator HflC 4191 53.89 0 4812223..4813521 + 432 117626523 purA APECO1_2215 - adenylosuccinate synthetase 4192 48.36 0 4813726..4814151 + 141 117626524 yjeB APECO1_2214 - transcriptional repressor NsrR 4193 54.63 0 4814148..4816631 + 827 117626525 rnr APECO1_2213 - exoribonuclease R 4194 55.46 0 4816723..4817454 + 243 117626526 yjfH APECO1_2212 - 23S rRNA (guanosine-2'-O-)-methyltransferase 4195 38.81 -2 4817581..4817982 + 133 117626527 yjfI APECO1_2211 - hypothetical protein 4196 50.93 0 4818001..4818699 + 232 117626528 yjfJ APECO1_2210 - transcriptional regulator effector protein 4197 47.27 0 4818749..4819408 + 219 117626529 yjfK APECO1_2209 - hypothetical protein 4198 44.58 -1 4819345..4819824 + 159 117626530 yjfL APECO1_2208 - hypothetical protein 4199 49.30 0 4819834..4820472 + 212 117626531 yjfM APECO1_2207 - hypothetical protein 4200 52.41 0 4820475..4821638 + 387 117626532 yjfC APECO1_2206 - putative synthetase/amidase 4201 54.78 0 4821707..4823347 + 546 117626533 aidB APECO1_2205 - isovaleryl CoA dehydrogenase 4202 51.49 0 4823464..4823766 - 100 117626534 yjfN APECO1_2204 - hypothetical protein 4203 47.32 0 4823888..4824316 - 142 117626535 - APECO1_2203 - hypothetical protein 4204 53.20 0 4824399..4825148 + 249 117626536 - APECO1_2202 - esterase 4205 50.40 0 4825145..4825900 - 251 117626537 yjfQ APECO1_2201 - transcriptional repressor UlaR 4206 51.91 0 4826008..4827078 - 356 117626538 ulaG APECO1_2200 - putative L-ascorbate 6-phosphate lactonase 4207 52.72 0 4827427..4828824 + 465 162317558 ulaA APECO1_2199 - ascorbate-specific PTS system enzyme IIC 4208 55.86 +1 4829161..4829493 - 110 117626541 - APECO1_2197 - hypothetical protein 50.94 MEAN 4.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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