version 1.0
Escherichia coli APEC O1, complete genome - 1..5082025 4428 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 4057 59.01 +1 4666146..4667216 - 356 117626387 phnI APECO1_2351 - PhnI, carbon-phosphorus lyase complex subunit 4058 60.34 +1 4667210..4667794 - 194 117626388 phnH APECO1_2350 - carbon-phosphorus lyase complex subunit 4059 62.25 +2 4667791..4668243 - 150 117626389 phnG APECO1_2349 - PhnG, carbon-phosphorus lyase complex subunit 4060 61.75 +2 4668244..4668975 - 243 117626390 phnF APECO1_2348 - putative transcriptional regulator 4061 60.38 +2 4668990..4669832 - 280 117626391 phnE APECO1_2347 - PhnE, subunit of alkylphosphonate ABC transporter 4062 54.87 0 4669875..4670891 - 338 117626392 phnD APECO1_2346 - PhnD, subunit of alkylphosphonate ABC transporter 4063 57.92 +1 4670916..4671704 - 262 117626393 phnC APECO1_2345 - phosphonate/organophosphate ester transporter subunit 4064 51.35 0 4671837..4672280 - 147 117626394 phnB APECO1_2344 - hypothetical protein 4065 49.66 0 4672335..4672769 + 144 117626395 - APECO1_2343 - hypothetical protein 4066 51.01 0 4673178..4675406 + 742 117626396 yjdA APECO1_2342 - hypothetical protein 4067 56.74 +1 4675436..4676281 + 281 117626397 yjcZ APECO1_2341 - hypothetical protein 4068 50.17 0 4676545..4678047 + 500 117626398 proP APECO1_2340 - proline/glycine betaine transporter 4069 53.85 0 4678224..4679315 - 363 117626399 basS APECO1_2339 - sensor protein BasS/PmrB 4070 53.81 0 4679325..4679993 - 222 117626400 basR APECO1_2338 - DNA-binding transcriptional regulator BasR 4071 49.64 0 4679990..4681663 - 557 117626401 yjdB APECO1_2337 - putative cell division protein 4072 53.89 0 4681737..4683074 - 445 117626402 yjdE APECO1_2336 - arginine:agmatin antiporter 4073 41.60 -1 4683211..4683972 - 253 117626403 adiY APECO1_2335 - putative regulatory protein AdiY 4074 52.71 0 4684308..4686578 - 756 117626404 adiA APECO1_2334 - biodegradative arginine decarboxylase 4075 50.17 0 4686774..4687682 - 302 117626405 melR APECO1_2333 - DNA-binding transcriptional regulator MelR 4076 52.51 0 4687965..4689320 + 451 117626406 melA APECO1_2332 - alpha-galactosidase 4077 54.99 0 4689317..4689967 - 216 117626407 yjdF APECO1_2331 - hypothetical protein 4078 54.52 0 4690090..4691736 - 548 117626408 fumB APECO1_2330 - anaerobic class I fumarate hydratase (fumarase B) 4079 52.20 0 4691814..4693154 - 446 117626409 dcuB APECO1_2329 - anaerobic C4-dicarboxylate transporter 4080 49.44 0 4693725..4694444 - 239 117626410 yjdG APECO1_2328 - DNA-binding transcriptional activator DcuR 4081 50.06 0 4694441..4696072 - 543 117626411 yjdH APECO1_2327 - sensory histidine kinase DcuS 4082 41.76 -1 4696495..4696767 + 90 117626412 yjdJ APECO1_2326 - acyltransferase 4083 35.69 -2 4696995..4697291 + 98 117626413 yjdK APECO1_2325 - hypothetical protein 4084 47.63 0 4697611..4699128 - 505 117626414 lysS APECO1_2324 - lysyl-tRNA synthetase 4085 51.65 0 4699365..4700822 - 485 117626415 yjdL APECO1_2323 - putative peptide transporter 4086 47.51 0 4700881..4703067 - 728 117626416 cadA APECO1_2322 - lysine decarboxylase 1 4087 49.59 0 4703108..4704442 - 444 117626417 cadB APECO1_2321 - lysine/cadaverine antiporter 4088 42.24 -1 4704808..4706346 - 512 117626418 cadC APECO1_2320 - DNA-binding transcriptional activator CadC 4089 48.40 0 4707178..4707741 - 187 117626419 - APECO1_2319 - hypothetical protein 4090 50.83 0 4707826..4708248 - 140 117626420 - APECO1_2318 - hypothetical protein 4091 55.43 0 4708543..4709076 + 177 117626421 - APECO1_2317 - hypothetical protein 4092 58.07 +1 4709467..4709943 - 158 117626422 yeeS3 APECO1_2316 - putative radC-like protein YeeS 4093 55.64 0 4709994..4710401 + 135 117626423 - APECO1_2315 - hypothetical protein 4094 55.68 +1 4710703..4711521 - 272 117626424 - APECO1_2314 - hypothetical protein 4095 48.47 0 4711850..4712635 - 261 117626425 - APECO1_2313 - hypothetical protein 4096 50.07 0 4712678..4713358 - 226 117626426 yfjR APECO1_2312 - putative transcriptional regulator 4097 53.33 0 4713561..4714445 - 294 117626427 - APECO1_2311 - putative GTPase 4098 33.50 -2 4714546..4715769 + 407 117626428 - APECO1_2310 - hypothetical protein 4099 50.55 0 4717222..4717953 + 243 117626429 - APECO1_2309 - hypothetical protein 4100 53.07 0 4718111..4718875 + 254 117626430 - APECO1_2308 - hypothetical protein 4101 51.49 0 4719452..4719787 - 111 117626432 - APECO1_2306 - transposase InsC for insertion element IS2A/D/F/H/I/K 4102 46.57 0 4719926..4720990 + 354 117626433 - APECO1_2305 - putative cation/multidrug efflux pump protein 4103 42.47 -1 4721090..4721461 + 123 117626434 - APECO1_2304 - putative transcriptional repressor 4104 52.49 0 4722436..4723077 - 213 117626435 - APECO1_2303 - hypothetical protein 4105 53.12 0 4723026..4724177 - 383 162317559 - APECO1_2302 - S-adenosylmethionine synthetase 4106 42.52 -1 4724306..4725361 - 351 117626437 - APECO1_2301 - hypothetical protein 4107 42.99 -1 4725378..4726640 - 420 117626438 - APECO1_2300 - putative histidine kinase 4108 49.04 0 4726675..4726986 + 103 117626439 - APECO1_2299 - hypothetical protein 4109 55.56 0 4727190..4727711 - 173 117626440 - APECO1_2298 - hypothetical protein 4110 58.33 +1 4727739..4728278 - 179 117626441 - APECO1_2297 - hypothetical protein 4111 52.43 0 4728503..4728790 + 95 117626442 - APECO1_2296 - hypothetical protein 4112 54.08 0 4728764..4729669 - 301 117626443 - APECO1_2295 - hypothetical protein 4113 46.62 0 4729806..4730723 - 305 117626444 - APECO1_2294 - putative pyruvate-formate lyase-activating enzyme 4114 51.94 0 4730832..4733384 - 850 117626445 - APECO1_2293 - putative pyruvate formate-lyase 4115 43.74 -1 4733433..4734143 - 236 117626446 - APECO1_2292 - putative peptidase 4116 53.63 0 4734342..4735868 - 508 117626447 eutE APECO1_2291 - ethanolamine utilization protein EutE 4117 51.02 0 4735929..4736714 - 261 117626448 eutL APECO1_2290 - putative propanediol utilization protein 4118 50.35 0 4736736..4737017 - 93 117626449 pduA APECO1_2289 - putative propanediol utilization protein PduA 4119 53.75 0 4737302..4738609 - 435 117626450 - APECO1_2288 - propionate/acetate kinase 4120 54.82 0 4738527..4739024 - 165 117626451 pduO APECO1_2287 - putative propanediol utilization protein: B12 related 4121 53.33 0 4739052..4739321 - 89 117626452 eutN APECO1_2286 - ethanolamine utilization protein EutN 4122 51.79 0 4739333..4740058 - 241 117626453 - APECO1_2285 - hypothetical protein 4123 54.94 0 4740042..4740800 - 252 117626454 eutJ APECO1_2284 - ethanolamine utilization protein EutJ 4124 56.33 +1 4740855..4741541 - 228 117626455 - APECO1_2283 - putative propanediol utilization protein 4125 52.55 0 4741681..4742799 - 372 117626456 - APECO1_2282 - putative iron-containing alcohol dehydrogenase 4126 54.81 0 4743291..4743695 - 134 117626457 - APECO1_2281 - hypothetical protein 4127 49.28 0 4743929..4744204 + 91 117626458 - APECO1_2280 - hypothetical protein 4128 51.09 0 4744842..4745252 + 136 117626459 - APECO1_2279 - putative hemolysin activator protein 4129 53.12 0 4745339..4745722 + 127 117626460 - APECO1_2278 - hypothetical protein 4130 38.01 -2 4745961..4747415 + 484 117626461 - APECO1_2277 - hypothetical protein 4131 43.64 -1 4747547..4749331 + 594 117626462 - APECO1_2276 - KAP family protein 4132 46.61 0 4749331..4750083 + 250 117626463 - APECO1_2275 - hypothetical protein 4133 42.95 -1 4750065..4751384 + 439 117626464 - APECO1_2274 - hypothetical protein 4134 43.11 -1 4751381..4752106 + 241 117626465 - APECO1_2273 - putative TatD-related deoxyribonuclease 4135 42.19 -1 4752659..4753234 - 191 117626466 - APECO1_2272 - hypothetical protein 4136 46.35 0 4753242..4754570 - 442 117626467 - APECO1_2271 - hypothetical protein 4137 50.31 0 4754911..4755723 - 270 117626468 - APECO1_2270 - transposase insF for insertion sequence IS3A/B/C/D/E/fA 4138 44.75 -1 4755780..4756103 - 107 117626469 insN APECO1_2269 - transposase InsN for insertion sequence element IS911B 4139 51.59 0 4756137..4756514 - 125 117626470 - APECO1_2268 - hypothetical protein 4140 53.06 0 4757137..4757496 - 119 117626471 insB APECO1_2267 - IS1 InsB protein 4141 47.99 0 4757523..4757795 - 90 117626472 insA APECO1_2266 - IS1 InsA protein 4142 48.84 0 4758048..4759517 + 489 117626473 - APECO1_2265 - putative antiporter 4143 51.43 0 4759622..4761991 + 789 117626474 - APECO1_2264 - hypothetical protein 4144 48.53 0 4762066..4763565 + 499 117626475 - APECO1_2263 - putative amino acid antiporter 4145 52.17 0 4763708..4763983 + 91 117626476 insA APECO1_2262 - IS1 InsA protein 4146 54.96 0 4763902..4764405 + 167 117626477 insB APECO1_2261 - IS1 InsB protein 4147 38.04 -2 4764872..4765423 - 183 117626478 papX APECO1_2260 - putative regulator PapX protein 4148 43.17 -1 4765590..4765955 - 121 117626479 - APECO1_2259 - hypothetical protein 4149 54.74 0 4766031..4766357 - 108 117626480 - APECO1_2258 - hypothetical protein 4150 54.96 0 4766398..4766901 - 167 117626481 insB APECO1_2257 - IS1 InsB protein 4151 52.17 0 4766820..4767095 - 91 117626482 insA APECO1_2256 - IS1 InsA protein 4152 45.62 -1 4767625..4768698 - 357 117626483 shiA APECO1_2255 - ShiA-like protein 4153 48.74 0 4768924..4770189 - 421 117626484 int APECO1_2254 - Int (putative P4-type integrase) 4154 53.50 0 4770569..4771168 - 199 117626485 yjdC APECO1_2253 - putative transcriptional regulator 4155 53.29 0 4771181..4772959 - 592 117626486 dipZ APECO1_2252 - thiol:disulfide interchange protein precursor 4156 52.38 0 4773308..4774609 - 433 117626487 dcuA APECO1_2251 - anaerobic C4-dicarboxylate transporter 50.94 MEAN 4.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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