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Escherichia coli APEC O1, complete genome - 1..5082025 4428 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3894 55.17 0 4462520..4463467 + 315 117626221 pflC APECO1_2515 - pyruvate formate lyase II activase 3895 54.81 0 4463406..4463810 + 134 117626222 frwD APECO1_2514 - putative fructose-like phosphotransferase EIIB subunit 3 3896 53.05 0 4463797..4464648 - 283 117626223 yijO APECO1_2513 - DNA-binding transcriptional regulator 3897 50.00 0 4464874..4466607 - 577 117626224 yjjP APECO1_2512 - hypothetical protein 3898 55.77 +1 4466790..4469441 - 883 117626225 ppc APECO1_2511 - phosphoenolpyruvate carboxylase 3899 52.06 0 4469743..4470933 - 396 117626226 argE APECO1_2510 - acetylornithine deacetylase 3900 53.13 0 4471048..4472052 + 334 117626227 argC APECO1_2509 - N-acetyl-gamma-glutamyl-phosphate reductase 3901 54.94 0 4472027..4472836 + 269 117626228 argB APECO1_2508 - acetylglutamate kinase 3902 56.40 +1 4472897..4474270 + 457 117626229 argH APECO1_2507 - argininosuccinate lyase 3903 49.10 0 4474708..4475982 + 424 117626230 rspA APECO1_2506 - starvation sensing protein RspA 3904 50.93 0 4476049..4477332 + 427 117626231 yjjL APECO1_2505 - hypothetical protein 3905 55.45 0 4477539..4478501 + 320 117626232 oxyR APECO1_2504 - DNA-binding transcriptional regulator OxyR 3906 51.82 0 4478484..4479884 - 466 117626233 udhA APECO1_2503 - soluble pyridine nucleotide transhydrogenase 3907 53.98 0 4480214..4481380 + 388 117626234 - APECO1_2502 - putative hippuricase 3908 52.70 0 4481423..4482739 + 438 117626235 - APECO1_2501 - putative transporter 3909 52.62 0 4482789..4483493 + 234 117626236 yijC APECO1_2500 - DNA-binding transcriptional repressor FabR 3910 48.06 0 4483493..4483852 + 119 117626237 yijD APECO1_2499 - hypothetical protein 3911 50.23 0 4483892..4484992 - 366 117626238 trmA APECO1_2498 - tRNA (uracil-5-)-methyltransferase 3912 48.91 0 4485319..4487205 + 628 117626239 btuB APECO1_2497 - vitamin B12/cobalamin outer membrane transporter 3913 51.75 0 4487150..4488007 + 285 162317562 murI APECO1_2496 - glutamate racemase 3914 46.94 0 4493638..4494666 + 342 117626241 murB APECO1_2495 - UDP-N-acetylenolpyruvoylglucosamine reductase 3915 49.07 0 4494663..4495628 + 321 117626242 birA APECO1_2494 - biotin--protein ligase 3916 44.03 -1 4495657..4496628 - 323 117626243 coaA APECO1_2493 - pantothenate kinase 3917 53.33 0 4497525..4498709 + 394 117626244 tufA APECO1_2492 - elongation factor Tu 3918 54.95 0 4498939..4499322 + 127 117626245 secE APECO1_2491 - preprotein translocase subunit SecE 3919 51.28 0 4499324..4499869 + 181 117626246 nusG APECO1_2490 - transcription antitermination protein NusG 3920 51.50 0 4499974..4500975 - 333 117626247 - APECO1_2489 - hypothetical protein 3921 52.21 0 4501456..4501953 + 165 117626248 rplJ APECO1_2488 - 50S ribosomal protein L10 3922 46.49 0 4502005..4502445 - 146 117626249 - APECO1_2487 - hypothetical protein 3923 52.41 0 4502672..4506733 + 1353 117626250 rpoB APECO1_2486 - DNA-directed RNA polymerase subunit beta 3924 53.67 0 4506810..4511033 + 1407 117626251 rpoC APECO1_2485 - DNA-directed RNA polymerase subunit beta' 3925 54.50 0 4511273..4512406 - 377 117626252 thiH APECO1_2484 - thiamine biosynthesis protein ThiH 3926 58.24 +1 4512403..4513173 - 256 162317561 thiG APECO1_2483 - thiazole synthase 3927 56.42 +1 4513359..4514207 - 282 117626254 thiF APECO1_2482 - thiazole biosynthesis protein ThiF 3928 58.33 +1 4514107..4514742 - 211 117626255 thiE APECO1_24812 - thiamine-phosphate pyrophosphorylase 3929 55.12 0 4514742..4516637 - 631 117626256 thiC APECO1_2481 - thiamine biosynthesis protein ThiC 3930 48.01 0 4516870..4517346 - 158 117626257 yjaE APECO1_2480 - anti-RNA polymerase sigma 70 factor 3931 53.23 0 4517441..4518214 + 257 117626258 nudC APECO1_2479 - NADH pyrophosphatase 3932 56.06 +1 4518254..4519318 + 354 117626259 hemE APECO1_2478 - uroporphyrinogen decarboxylase 3933 58.78 +1 4519328..4519999 + 223 117626260 nfi APECO1_2477 - endonuclease V 3934 49.24 0 4520042..4520632 + 196 117626261 yjaG APECO1_2476 - hypothetical protein 3935 48.35 0 4520819..4521091 + 90 117626262 - APECO1_2475 - transcriptional regulator HU subunit alpha 3936 53.85 0 4521098..4521799 + 233 117626263 yjaH APECO1_2474 - hypothetical protein 3937 50.98 0 4521801..4522361 - 186 117626264 zraP APECO1_2473 - zinc resistance protein 3938 54.47 0 4522458..4523834 + 458 117626265 zraS APECO1_2472 - sensor protein ZraS 3939 56.64 +1 4523831..4525156 + 441 117626266 zraR APECO1_2471 - transcriptional regulatory protein ZraR 3940 58.53 +1 4525153..4526442 - 429 117626267 purD APECO1_2470 - phosphoribosylamine--glycine ligase 3941 55.72 +1 4526454..4528043 - 529 117626268 purH APECO1_2469 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3942 46.74 0 4528359..4528619 - 86 117626269 - APECO1_2468 - hypothetical protein 3943 44.79 -1 4533761..4534144 + 127 117626272 yjaA APECO1_2465 - hypothetical protein 3944 53.15 0 4534208..4534651 - 147 117626273 yjaB APECO1_2464 - hypothetical protein 3945 50.32 0 4534808..4535737 + 309 117626274 metA APECO1_2463 - homoserine O-succinyltransferase 3946 51.17 0 4535988..4537607 + 539 117626275 aceB APECO1_2462 - malate synthase 3947 55.23 0 4537622..4538941 + 439 117626276 aceA APECO1_2461 - isocitrate lyase 3948 52.75 0 4538990..4540714 + 574 117626277 aceK APECO1_2460 - bifunctional isocitrate dehydrogenase kinase/phosphatase protein 3949 53.94 0 4540731..4541594 - 287 117626278 iclR APECO1_2459 - transcriptional repressor IclR 3950 55.74 +1 4541740..4545438 + 1232 117626279 metH APECO1_2458 - B12-dependent methionine synthase 3951 34.27 -2 4545498..4545818 + 106 117626280 - APECO1_2457 - hypothetical protein 3952 36.22 -2 4545861..4546310 + 149 117626281 - APECO1_2456 - hypothetical protein 3953 55.09 0 4546481..4548112 + 543 117626282 yjbB APECO1_2455 - hypothetical protein 3954 54.93 0 4548202..4548891 - 229 117626283 pepE APECO1_2454 - peptidase E 3955 53.06 0 4549273..4550514 - 413 117626284 - APECO1_2453 - putative L-sorbose-1-P-reductase 3956 54.21 0 4550554..4551396 - 280 117626285 - APECO1_2452 - PTS system, mannose-specific IID component 3957 52.88 0 4551389..4552186 - 265 117626286 sorA APECO1_2451 - putative sorbose-permease PTS system IIC component SorA 3958 45.05 -1 4552252..4552746 - 164 117626287 - APECO1_2450 - PTS system, sorbose-specific IIB component 3959 54.41 0 4552746..4553153 - 135 117626288 - APECO1_2449 - putative sorbose PTS component 3960 51.30 0 4553163..4553969 - 268 117626289 - APECO1_2448 - sorbitol-6-phosphate 2-dehydrogenase 3961 49.45 0 4554039..4555031 - 330 117626290 - APECO1_2447 - putative transcriptional regulator of sorbose uptake and utilization genes 3962 50.52 0 4555334..4556206 + 290 117626291 yjbC APECO1_2446 - 23S rRNA pseudouridine synthase F 3963 50.18 0 4556207..4556479 - 90 117626292 yjbD APECO1_2445 - hypothetical protein 3964 53.85 0 4556732..4558081 - 449 117626293 lysC APECO1_2444 - aspartate kinase III 3965 51.45 0 4558606..4560255 + 549 117626294 pgi APECO1_2443 - glucose-6-phosphate isomerase 3966 54.11 0 4561080..4561748 + 222 117626296 yjbF APECO1_2441 - hypothetical protein 3967 57.99 +1 4561745..4562482 + 245 117626297 yjbG APECO1_2440 - hypothetical protein 3968 54.60 0 4562482..4564578 + 698 117626298 yjbH APECO1_2439 - hypothetical protein 3969 48.39 0 4564625..4564903 - 92 117626299 - APECO1_2438 - hypothetical protein 3970 48.91 0 4565118..4565528 + 136 117626300 yjbE APECO1_2437 - phosphate-starvation-inducible protein PsiE 3971 54.99 0 4565622..4566512 - 296 117626301 malG APECO1_2436 - maltose transporter permease 3972 52.95 0 4566527..4568086 - 519 117626302 malF APECO1_2435 - maltose transporter membrane protein 3973 50.29 0 4568225..4569415 - 396 117626303 malE APECO1_2434 - maltose ABC transporter periplasmic protein 3974 54.48 0 4569690..4570895 + 401 117626304 malK APECO1_2433 - maltose/maltodextrin transporter ATP-binding protein 3975 51.90 0 4570967..4572307 + 446 117626305 lamB APECO1_2432 - maltoporin 3976 52.58 0 4572621..4573550 + 309 117626306 malM APECO1_2431 - maltose regulon periplasmic protein 3977 52.21 0 4573729..4574226 + 165 117626307 ubiC APECO1_2430 - chorismate pyruvate lyase 3978 51.43 0 4574239..4575111 + 290 117626308 ubiA APECO1_2429 - 4-hydroxybenzoate octaprenyltransferase 3979 54.99 0 4575264..4577747 - 827 117626309 plsB APECO1_2428 - glycerol-3-phosphate acyltransferase 3980 50.68 0 4577858..4578226 + 122 117626310 dgkA APECO1_2427 - diacylglycerol kinase DgkA 3981 51.89 0 4578336..4578944 + 202 117626311 lexA APECO1_2426 - LexA repressor 3982 54.93 0 4578963..4580342 + 459 117626312 dinF APECO1_2425 - DNA-damage-inducible SOS response protein 3983 49.64 0 4580709..4581395 - 228 117626313 yjbK APECO1_2424 - zinc uptake transcriptional repressor 3984 53.61 0 4581380..4582375 + 331 117626314 yjbN APECO1_2423 - tRNA-dihydrouridine synthase A 3985 48.34 0 4582299..4582751 + 150 117626315 pspG APECO1_2422 - phage shock protein G 3986 52.44 0 4582916..4583899 - 327 117626316 qor APECO1_2421 - quinone oxidoreductase, NADPH-dependent 3987 51.77 0 4584005..4586125 - 706 117626317 - APECO1_2420 - putative oxidoreductase 3988 50.96 0 4586043..4587443 - 466 117626318 - APECO1_2419 - putative transmembrane transport protein 3989 56.28 +1 4587534..4588313 - 259 117626319 - APECO1_2418 - putative enoyl-CoA hydratase/isomerase family protein 3990 52.54 0 4588306..4589877 - 523 117626320 - APECO1_2417 - putative propionate CoA-transferase 3991 50.24 0 4590133..4591167 + 344 117626321 - APECO1_2416 - LacI family transcriptional regulator 3992 52.90 0 4591240..4592655 + 471 117626322 dnaB APECO1_2415 - replicative DNA helicase 3993 55.74 +1 4592708..4593787 + 359 117626323 alr APECO1_2414 - alanine racemase 50.94 MEAN 4.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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