version 1.0
Escherichia coli APEC O1, complete genome - 1..5082025 4428 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3857 50.61 0 4417810..4418799 + 329 117626184 sbp APECO1_2552 - sulfate transporter subunit 3858 49.31 0 4418717..4419661 + 314 117626185 cdh APECO1_2551 - CDP-diacylglycerol pyrophosphatase 3859 52.99 0 4419716..4420483 - 255 117626186 tpiA APECO1_2550 - triosephosphate isomerase 3860 49.33 0 4420591..4421190 - 199 117626187 yiiQ APECO1_2549 - hypothetical protein 3861 48.75 0 4421291..4421731 + 146 117626188 yiiR APECO1_2548 - hypothetical protein 3862 47.00 0 4421943..4422242 + 99 117626189 yiiS APECO1_2547 - hypothetical protein 3863 43.59 -1 4422269..4422697 + 142 117626190 yiiT APECO1_2546 - universal stress protein UspD 3864 53.01 0 4422702..4423448 - 248 117626191 fpr APECO1_2545 - ferredoxin-NADP reductase 3865 55.89 +1 4423545..4424555 - 336 117626192 glpX APECO1_2544 - fructose 1,6-bisphosphatase II 3866 54.05 0 4424726..4426255 - 509 117626193 glpK APECO1_2543 - glycerol kinase 3867 51.06 0 4426257..4427102 - 281 117626194 glpF APECO1_2542 - glycerol uptake facilitator protein 3868 51.68 0 4427914..4428420 + 168 117626195 - APECO1_2541 - hypothetical protein 3869 53.40 0 4428435..4429361 - 308 117626196 menA APECO1_2540 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase 3870 52.25 0 4429428..4430759 - 443 117626197 hslU APECO1_2539 - ATP-dependent protease ATP-binding subunit 3871 52.54 0 4430769..4431299 - 176 117626198 hslV APECO1_2538 - ATP-dependent protease peptidase subunit 3872 57.60 +1 4431392..4432351 - 319 117626199 ftsN APECO1_2537 - essential cell division protein 3873 51.55 0 4432443..4433474 - 343 117626200 cytR APECO1_2536 - DNA-binding transcriptional regulator CytR 3874 56.58 +1 4433624..4435894 - 756 117626201 priA APECO1_2535 - primosome assembly protein PriA 3875 52.71 0 4436298..4436906 - 202 117626202 yliX APECO1_2534 - putative peptidoglycan peptidase 3876 50.44 0 4436966..4437421 - 151 117626203 metJ APECO1_2533 - transcriptional repressor protein MetJ 3877 54.90 0 4437506..4438720 + 404 117626204 metB APECO1_2532 - cystathionine gamma-synthase 3878 57.95 +1 4438723..4441155 + 810 117626205 metL APECO1_2531 - bifunctional aspartate kinase II/homoserine dehydrogenase II 3879 39.14 -2 4441373..4442233 - 286 117626206 tsx APECO1_2530 - nucleoside-specific channel-forming protein Tsx precursor 3880 44.22 -1 4442310..4443935 - 541 117626207 - APECO1_2529 - hypothetical protein 3881 41.06 -2 4443970..4445523 - 517 117626208 - APECO1_2528 - hypothetical protein 3882 47.20 0 4445753..4446877 - 374 117626209 - APECO1_2527 - putative cytoplasmic protein 3883 47.94 0 4447010..4448563 + 517 117626210 - APECO1_2526 - putative 5'-nucleotidase/2',3'-cyclic phosphodiesterase or related esterase 3884 52.53 0 4448945..4449835 + 296 117626211 metF APECO1_2525 - 5,10-methylenetetrahydrofolate reductase 3885 55.66 +1 4450164..4452344 + 726 117626212 katG APECO1_2524 - catalase/hydroperoxidase HPI(I) 3886 53.70 0 4452372..4453343 + 323 117626213 yijE APECO1_2523 - permease 3887 52.59 0 4453370..4453987 - 205 117626214 yijF APECO1_2522 - hypothetical protein 3888 54.42 0 4454263..4455405 - 380 117626215 gldA APECO1_2521 - glycerol dehydrogenase 3889 53.39 0 4455377..4456039 - 220 117626216 fsaB APECO1_2520 - fructose-6-phosphate aldolase 3890 55.04 0 4456051..4458552 - 833 117626217 ptsA APECO1_2519 - phosphoenolpyruvate-protein phosphotransferase PtsA 3891 55.09 0 4458861..4459940 + 359 117626218 fruA APECO1_2518 - putative fructose-like permease EIIC subunit 2 3892 52.29 0 4459988..4460314 - 108 117626219 - APECO1_2517 - hypothetical protein 3893 53.09 0 4460326..4462623 + 765 117626220 pflD APECO1_2516 - putative formate acetyltransferase 2 3894 55.17 0 4462520..4463467 + 315 117626221 pflC APECO1_2515 - pyruvate formate lyase II activase 3895 54.81 0 4463406..4463810 + 134 117626222 frwD APECO1_2514 - putative fructose-like phosphotransferase EIIB subunit 3 3896 53.05 0 4463797..4464648 - 283 117626223 yijO APECO1_2513 - DNA-binding transcriptional regulator 3897 50.00 0 4464874..4466607 - 577 117626224 yjjP APECO1_2512 - hypothetical protein 3898 55.77 +1 4466790..4469441 - 883 117626225 ppc APECO1_2511 - phosphoenolpyruvate carboxylase 3899 52.06 0 4469743..4470933 - 396 117626226 argE APECO1_2510 - acetylornithine deacetylase 3900 53.13 0 4471048..4472052 + 334 117626227 argC APECO1_2509 - N-acetyl-gamma-glutamyl-phosphate reductase 3901 54.94 0 4472027..4472836 + 269 117626228 argB APECO1_2508 - acetylglutamate kinase 3902 56.40 +1 4472897..4474270 + 457 117626229 argH APECO1_2507 - argininosuccinate lyase 3903 49.10 0 4474708..4475982 + 424 117626230 rspA APECO1_2506 - starvation sensing protein RspA 3904 50.93 0 4476049..4477332 + 427 117626231 yjjL APECO1_2505 - hypothetical protein 3905 55.45 0 4477539..4478501 + 320 117626232 oxyR APECO1_2504 - DNA-binding transcriptional regulator OxyR 3906 51.82 0 4478484..4479884 - 466 117626233 udhA APECO1_2503 - soluble pyridine nucleotide transhydrogenase 3907 53.98 0 4480214..4481380 + 388 117626234 - APECO1_2502 - putative hippuricase 3908 52.70 0 4481423..4482739 + 438 117626235 - APECO1_2501 - putative transporter 3909 52.62 0 4482789..4483493 + 234 117626236 yijC APECO1_2500 - DNA-binding transcriptional repressor FabR 3910 48.06 0 4483493..4483852 + 119 117626237 yijD APECO1_2499 - hypothetical protein 3911 50.23 0 4483892..4484992 - 366 117626238 trmA APECO1_2498 - tRNA (uracil-5-)-methyltransferase 3912 48.91 0 4485319..4487205 + 628 117626239 btuB APECO1_2497 - vitamin B12/cobalamin outer membrane transporter 3913 51.75 0 4487150..4488007 + 285 162317562 murI APECO1_2496 - glutamate racemase 3914 46.94 0 4493638..4494666 + 342 117626241 murB APECO1_2495 - UDP-N-acetylenolpyruvoylglucosamine reductase 3915 49.07 0 4494663..4495628 + 321 117626242 birA APECO1_2494 - biotin--protein ligase 3916 44.03 -1 4495657..4496628 - 323 117626243 coaA APECO1_2493 - pantothenate kinase 3917 53.33 0 4497525..4498709 + 394 117626244 tufA APECO1_2492 - elongation factor Tu 3918 54.95 0 4498939..4499322 + 127 117626245 secE APECO1_2491 - preprotein translocase subunit SecE 3919 51.28 0 4499324..4499869 + 181 117626246 nusG APECO1_2490 - transcription antitermination protein NusG 3920 51.50 0 4499974..4500975 - 333 117626247 - APECO1_2489 - hypothetical protein 3921 52.21 0 4501456..4501953 + 165 117626248 rplJ APECO1_2488 - 50S ribosomal protein L10 3922 46.49 0 4502005..4502445 - 146 117626249 - APECO1_2487 - hypothetical protein 3923 52.41 0 4502672..4506733 + 1353 117626250 rpoB APECO1_2486 - DNA-directed RNA polymerase subunit beta 3924 53.67 0 4506810..4511033 + 1407 117626251 rpoC APECO1_2485 - DNA-directed RNA polymerase subunit beta' 3925 54.50 0 4511273..4512406 - 377 117626252 thiH APECO1_2484 - thiamine biosynthesis protein ThiH 3926 58.24 +1 4512403..4513173 - 256 162317561 thiG APECO1_2483 - thiazole synthase 3927 56.42 +1 4513359..4514207 - 282 117626254 thiF APECO1_2482 - thiazole biosynthesis protein ThiF 3928 58.33 +1 4514107..4514742 - 211 117626255 thiE APECO1_24812 - thiamine-phosphate pyrophosphorylase 3929 55.12 0 4514742..4516637 - 631 117626256 thiC APECO1_2481 - thiamine biosynthesis protein ThiC 3930 48.01 0 4516870..4517346 - 158 117626257 yjaE APECO1_2480 - anti-RNA polymerase sigma 70 factor 3931 53.23 0 4517441..4518214 + 257 117626258 nudC APECO1_2479 - NADH pyrophosphatase 3932 56.06 +1 4518254..4519318 + 354 117626259 hemE APECO1_2478 - uroporphyrinogen decarboxylase 3933 58.78 +1 4519328..4519999 + 223 117626260 nfi APECO1_2477 - endonuclease V 3934 49.24 0 4520042..4520632 + 196 117626261 yjaG APECO1_2476 - hypothetical protein 3935 48.35 0 4520819..4521091 + 90 117626262 - APECO1_2475 - transcriptional regulator HU subunit alpha 3936 53.85 0 4521098..4521799 + 233 117626263 yjaH APECO1_2474 - hypothetical protein 3937 50.98 0 4521801..4522361 - 186 117626264 zraP APECO1_2473 - zinc resistance protein 3938 54.47 0 4522458..4523834 + 458 117626265 zraS APECO1_2472 - sensor protein ZraS 3939 56.64 +1 4523831..4525156 + 441 117626266 zraR APECO1_2471 - transcriptional regulatory protein ZraR 3940 58.53 +1 4525153..4526442 - 429 117626267 purD APECO1_2470 - phosphoribosylamine--glycine ligase 3941 55.72 +1 4526454..4528043 - 529 117626268 purH APECO1_2469 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3942 46.74 0 4528359..4528619 - 86 117626269 - APECO1_2468 - hypothetical protein 3943 44.79 -1 4533761..4534144 + 127 117626272 yjaA APECO1_2465 - hypothetical protein 3944 53.15 0 4534208..4534651 - 147 117626273 yjaB APECO1_2464 - hypothetical protein 3945 50.32 0 4534808..4535737 + 309 117626274 metA APECO1_2463 - homoserine O-succinyltransferase 3946 51.17 0 4535988..4537607 + 539 117626275 aceB APECO1_2462 - malate synthase 3947 55.23 0 4537622..4538941 + 439 117626276 aceA APECO1_2461 - isocitrate lyase 3948 52.75 0 4538990..4540714 + 574 117626277 aceK APECO1_2460 - bifunctional isocitrate dehydrogenase kinase/phosphatase protein 3949 53.94 0 4540731..4541594 - 287 117626278 iclR APECO1_2459 - transcriptional repressor IclR 3950 55.74 +1 4541740..4545438 + 1232 117626279 metH APECO1_2458 - B12-dependent methionine synthase 3951 34.27 -2 4545498..4545818 + 106 117626280 - APECO1_2457 - hypothetical protein 3952 36.22 -2 4545861..4546310 + 149 117626281 - APECO1_2456 - hypothetical protein 3953 55.09 0 4546481..4548112 + 543 117626282 yjbB APECO1_2455 - hypothetical protein 3954 54.93 0 4548202..4548891 - 229 117626283 pepE APECO1_2454 - peptidase E 3955 53.06 0 4549273..4550514 - 413 117626284 - APECO1_2453 - putative L-sorbose-1-P-reductase 3956 54.21 0 4550554..4551396 - 280 117626285 - APECO1_2452 - PTS system, mannose-specific IID component 50.94 MEAN 4.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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