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Escherichia coli APEC O1, complete genome - 1..5082025 4428 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3817 53.29 0 4376376..4378199 + 607 117626144 bipA APECO1_2591 - GTP-binding protein 3818 50.19 0 4378306..4379094 - 262 117626145 - APECO1_2590 - putative regulatory protein 3819 49.89 0 4379134..4380081 - 315 117626146 - APECO1_2589 - hypothetical protein 3820 50.21 0 4380133..4381080 + 315 117626147 - APECO1_2588 - hypothetical protein 3821 52.25 0 4381105..4381992 + 295 117626148 - APECO1_2587 - hypothetical protein 3822 52.92 0 4382025..4383035 + 336 117626149 - APECO1_2586 - putative dehydrogenase 3823 49.58 0 4383105..4384538 + 477 117626150 - APECO1_2585 - hypothetical protein 3824 46.30 0 4384637..4385986 + 449 117626151 - APECO1_2584 - putative shikimate transporter 3825 49.41 0 4385931..4386863 + 310 117626152 - APECO1_2583 - hypothetical protein 3826 49.44 0 4386983..4387603 + 206 117626153 - APECO1_2582 - phosphatase 3827 51.09 0 4387597..4388469 + 290 117626154 rbn APECO1_2581 - ribonuclease BN 3828 54.79 0 4388466..4388903 + 145 117626155 dtd APECO1_2580 - D-tyrosyl-tRNA deacylase 3829 54.04 0 4388900..4389889 + 329 117626156 yiiD APECO1_2579 - acetyltransferase 3830 51.02 0 4389953..4390936 - 327 117626157 - APECO1_2578 - putative lipase 3831 40.71 -2 4391090..4391401 + 103 117626158 - APECO1_2577 - hypothetical protein 3832 48.80 0 4391402..4391692 + 96 117626159 - APECO1_2576 - hypothetical protein 3833 48.39 0 4392051..4392329 + 92 117626160 - APECO1_2575 - hypothetical protein 3834 54.73 0 4393159..4394088 - 309 117626161 fdhE APECO1_2574 - formate dehydrogenase accessory protein FdhE 3835 52.52 0 4394085..4394720 - 211 117626162 fdoI APECO1_2573 - formate dehydrogenase-O subunit gamma 3836 55.59 0 4394717..4395619 - 300 117626163 fdoH APECO1_2572 - formate dehydrogenase-O, Fe-S subunit 3837 54.37 0 4395632..4398046 - 804 117626164 fdoG APECO1_25712 - formate dehydrogenase-O, large subunit 3838 55.61 0 4398095..4398682 - 195 117626165 fdoG APECO1_2571 - formate dehydrogenase-O, large subunit 3839 53.48 0 4398876..4399709 + 277 117626166 fdhD APECO1_2570 - formate dehydrogenase accessory protein 3840 44.62 -1 4400105..4400485 + 126 117626167 yiiG APECO1_2569 - hypothetical protein 3841 44.87 -1 4400839..4402233 + 464 117626168 - APECO1_2568 - putative glycoporin 3842 49.52 0 4402274..4402588 - 104 117626169 yiiL APECO1_2567 - hypothetical protein 3843 55.15 0 4402598..4403422 - 274 117626170 rhaD APECO1_2566 - rhamnulose-1-phosphate aldolase 3844 55.16 0 4403699..4404958 - 419 117626171 rhaA APECO1_2565 - L-rhamnose isomerase 3845 54.63 0 4404955..4406424 - 489 117626172 rhaB APECO1_2564 - rhamnulokinase 3846 51.73 0 4406712..4407548 + 278 117626173 rhaS APECO1_2563 - transcriptional activator RhaS 3847 49.84 0 4407532..4408470 + 312 117626174 rhaR APECO1_2562 - transcriptional activator RhaR 3848 51.98 0 4408467..4409501 - 344 117626175 rhaT APECO1_2561 - rhamnose-proton symporter 3849 53.11 0 4409780..4410406 + 208 117626176 sodA APECO1_2560 - superoxide dismutase 3850 52.74 0 4410666..4411649 + 327 162317563 kdgT APECO1_2559 - 2-keto-3-deoxygluconate permease 3851 51.74 0 4411783..4412472 + 229 117626178 yiiM APECO1_2558 - hypothetical protein 3852 54.66 0 4412578..4413951 - 457 117626179 cpxA APECO1_2557 - two-component sensor protein 3853 51.07 0 4413948..4414646 - 232 117626180 cpxR APECO1_2556 - DNA-binding transcriptional regulator CpxR 3854 50.00 0 4414793..4415296 + 167 117626181 cpxP APECO1_2555 - periplasmic repressor CpxP 3855 52.60 0 4415445..4416347 + 300 117626182 fieF APECO1_2554 - ferrous iron efflux protein F 3856 52.98 0 4416468..4417490 + 340 117626183 pfkA APECO1_2553 - 6-phosphofructokinase 3857 50.61 0 4417810..4418799 + 329 117626184 sbp APECO1_2552 - sulfate transporter subunit 3858 49.31 0 4418717..4419661 + 314 117626185 cdh APECO1_2551 - CDP-diacylglycerol pyrophosphatase 3859 52.99 0 4419716..4420483 - 255 117626186 tpiA APECO1_2550 - triosephosphate isomerase 3860 49.33 0 4420591..4421190 - 199 117626187 yiiQ APECO1_2549 - hypothetical protein 3861 48.75 0 4421291..4421731 + 146 117626188 yiiR APECO1_2548 - hypothetical protein 3862 47.00 0 4421943..4422242 + 99 117626189 yiiS APECO1_2547 - hypothetical protein 3863 43.59 -1 4422269..4422697 + 142 117626190 yiiT APECO1_2546 - universal stress protein UspD 3864 53.01 0 4422702..4423448 - 248 117626191 fpr APECO1_2545 - ferredoxin-NADP reductase 3865 55.89 +1 4423545..4424555 - 336 117626192 glpX APECO1_2544 - fructose 1,6-bisphosphatase II 3866 54.05 0 4424726..4426255 - 509 117626193 glpK APECO1_2543 - glycerol kinase 3867 51.06 0 4426257..4427102 - 281 117626194 glpF APECO1_2542 - glycerol uptake facilitator protein 3868 51.68 0 4427914..4428420 + 168 117626195 - APECO1_2541 - hypothetical protein 3869 53.40 0 4428435..4429361 - 308 117626196 menA APECO1_2540 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase 3870 52.25 0 4429428..4430759 - 443 117626197 hslU APECO1_2539 - ATP-dependent protease ATP-binding subunit 3871 52.54 0 4430769..4431299 - 176 117626198 hslV APECO1_2538 - ATP-dependent protease peptidase subunit 3872 57.60 +1 4431392..4432351 - 319 117626199 ftsN APECO1_2537 - essential cell division protein 3873 51.55 0 4432443..4433474 - 343 117626200 cytR APECO1_2536 - DNA-binding transcriptional regulator CytR 3874 56.58 +1 4433624..4435894 - 756 117626201 priA APECO1_2535 - primosome assembly protein PriA 3875 52.71 0 4436298..4436906 - 202 117626202 yliX APECO1_2534 - putative peptidoglycan peptidase 3876 50.44 0 4436966..4437421 - 151 117626203 metJ APECO1_2533 - transcriptional repressor protein MetJ 3877 54.90 0 4437506..4438720 + 404 117626204 metB APECO1_2532 - cystathionine gamma-synthase 3878 57.95 +1 4438723..4441155 + 810 117626205 metL APECO1_2531 - bifunctional aspartate kinase II/homoserine dehydrogenase II 3879 39.14 -2 4441373..4442233 - 286 117626206 tsx APECO1_2530 - nucleoside-specific channel-forming protein Tsx precursor 3880 44.22 -1 4442310..4443935 - 541 117626207 - APECO1_2529 - hypothetical protein 3881 41.06 -2 4443970..4445523 - 517 117626208 - APECO1_2528 - hypothetical protein 3882 47.20 0 4445753..4446877 - 374 117626209 - APECO1_2527 - putative cytoplasmic protein 3883 47.94 0 4447010..4448563 + 517 117626210 - APECO1_2526 - putative 5'-nucleotidase/2',3'-cyclic phosphodiesterase or related esterase 3884 52.53 0 4448945..4449835 + 296 117626211 metF APECO1_2525 - 5,10-methylenetetrahydrofolate reductase 3885 55.66 +1 4450164..4452344 + 726 117626212 katG APECO1_2524 - catalase/hydroperoxidase HPI(I) 3886 53.70 0 4452372..4453343 + 323 117626213 yijE APECO1_2523 - permease 3887 52.59 0 4453370..4453987 - 205 117626214 yijF APECO1_2522 - hypothetical protein 3888 54.42 0 4454263..4455405 - 380 117626215 gldA APECO1_2521 - glycerol dehydrogenase 3889 53.39 0 4455377..4456039 - 220 117626216 fsaB APECO1_2520 - fructose-6-phosphate aldolase 3890 55.04 0 4456051..4458552 - 833 117626217 ptsA APECO1_2519 - phosphoenolpyruvate-protein phosphotransferase PtsA 3891 55.09 0 4458861..4459940 + 359 117626218 fruA APECO1_2518 - putative fructose-like permease EIIC subunit 2 3892 52.29 0 4459988..4460314 - 108 117626219 - APECO1_2517 - hypothetical protein 3893 53.09 0 4460326..4462623 + 765 117626220 pflD APECO1_2516 - putative formate acetyltransferase 2 3894 55.17 0 4462520..4463467 + 315 117626221 pflC APECO1_2515 - pyruvate formate lyase II activase 3895 54.81 0 4463406..4463810 + 134 117626222 frwD APECO1_2514 - putative fructose-like phosphotransferase EIIB subunit 3 3896 53.05 0 4463797..4464648 - 283 117626223 yijO APECO1_2513 - DNA-binding transcriptional regulator 3897 50.00 0 4464874..4466607 - 577 117626224 yjjP APECO1_2512 - hypothetical protein 3898 55.77 +1 4466790..4469441 - 883 117626225 ppc APECO1_2511 - phosphoenolpyruvate carboxylase 3899 52.06 0 4469743..4470933 - 396 117626226 argE APECO1_2510 - acetylornithine deacetylase 3900 53.13 0 4471048..4472052 + 334 117626227 argC APECO1_2509 - N-acetyl-gamma-glutamyl-phosphate reductase 3901 54.94 0 4472027..4472836 + 269 117626228 argB APECO1_2508 - acetylglutamate kinase 3902 56.40 +1 4472897..4474270 + 457 117626229 argH APECO1_2507 - argininosuccinate lyase 3903 49.10 0 4474708..4475982 + 424 117626230 rspA APECO1_2506 - starvation sensing protein RspA 3904 50.93 0 4476049..4477332 + 427 117626231 yjjL APECO1_2505 - hypothetical protein 3905 55.45 0 4477539..4478501 + 320 117626232 oxyR APECO1_2504 - DNA-binding transcriptional regulator OxyR 3906 51.82 0 4478484..4479884 - 466 117626233 udhA APECO1_2503 - soluble pyridine nucleotide transhydrogenase 3907 53.98 0 4480214..4481380 + 388 117626234 - APECO1_2502 - putative hippuricase 3908 52.70 0 4481423..4482739 + 438 117626235 - APECO1_2501 - putative transporter 3909 52.62 0 4482789..4483493 + 234 117626236 yijC APECO1_2500 - DNA-binding transcriptional repressor FabR 3910 48.06 0 4483493..4483852 + 119 117626237 yijD APECO1_2499 - hypothetical protein 3911 50.23 0 4483892..4484992 - 366 117626238 trmA APECO1_2498 - tRNA (uracil-5-)-methyltransferase 3912 48.91 0 4485319..4487205 + 628 117626239 btuB APECO1_2497 - vitamin B12/cobalamin outer membrane transporter 3913 51.75 0 4487150..4488007 + 285 162317562 murI APECO1_2496 - glutamate racemase 3914 46.94 0 4493638..4494666 + 342 117626241 murB APECO1_2495 - UDP-N-acetylenolpyruvoylglucosamine reductase 3915 49.07 0 4494663..4495628 + 321 117626242 birA APECO1_2494 - biotin--protein ligase 3916 44.03 -1 4495657..4496628 - 323 117626243 coaA APECO1_2493 - pantothenate kinase 50.94 MEAN 4.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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