version 1.0
Escherichia coli APEC O1, complete genome - 1..5082025 4428 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3763 39.53 -2 4312693..4312950 - 85 117626089 - APECO1_2646 - hypothetical protein 3764 38.21 -2 4312947..4313438 - 163 117626090 - APECO1_2645 - hypothetical protein 3765 40.82 -2 4313787..4314080 - 97 117626091 - APECO1_2644 - hypothetical protein 3766 49.58 0 4314532..4315122 + 196 117626092 - APECO1_2643 - putative sugar isomerase 3767 49.37 0 4315164..4316672 + 502 117626093 - APECO1_2642 - PTS system, glucose-specific IIBC component 3768 54.90 0 4316723..4318720 + 665 117626094 - APECO1_2641 - transketolase 3769 40.90 -2 4318750..4319595 - 281 117626095 - APECO1_2640 - putative transcriptional regulatory protein 3770 46.14 -1 4319796..4320701 - 301 117626096 - APECO1_2639 - putative transcriptional regulatory protein 3771 51.72 0 4320779..4322002 - 407 117626097 - APECO1_2638 - putative permease for cytosine/purines, uracil, thiamine, allantoin 3772 50.77 0 4322028..4322417 - 129 117626098 - APECO1_2637 - hypothetical protein 3773 54.34 0 4322434..4323390 - 318 162317564 - APECO1_2636 - carbamate kinase 3774 53.93 0 4323383..4324858 - 491 117626100 yahG APECO1_2635 - hypothetical protein 3775 52.44 0 4324804..4326363 - 519 117626101 yahF APECO1_2634 - hypothetical protein 3776 50.06 0 4326458..4327318 - 286 117626102 yahE APECO1_2633 - hypothetical protein 3777 50.22 0 4327324..4327992 - 222 117626103 - APECO1_2632 - putative isochorismatase hydrolase 3778 52.74 0 4328249..4329124 - 291 117626104 - APECO1_2631 - putative dienelactone hydrolase 3779 54.12 0 4329320..4330084 + 254 117626105 udp APECO1_2630 - uridine phosphorylase 3780 51.24 0 4330119..4331609 - 496 117626106 - APECO1_2629 - hypothetical protein 3781 51.08 0 4331622..4332128 - 168 117626107 - APECO1_2628 - hypothetical protein 3782 52.72 0 4332145..4333119 - 324 117626108 - APECO1_2627 - hypothetical protein 3783 54.86 0 4333280..4333804 + 174 117626109 - APECO1_2626 - putative aldolase 3784 53.03 0 4333763..4334767 - 334 117626110 - APECO1_2625 - putative 2-keto-3-deoxygalactokinase 3785 52.51 0 4334791..4335645 - 284 117626111 - APECO1_2624 - putative transcriptional regulatory protein 3786 52.45 0 4335775..4337202 + 475 117626112 rmuC APECO1_2623 - DNA recombination protein RmuC 3787 51.85 0 4337297..4338052 + 251 117626113 ubiE APECO1_2622 - ubiquinone/menaquinone biosynthesis methyltransferase 3788 55.82 +1 4338036..4338671 + 211 117626114 yigP APECO1_2621 - hypothetical protein 3789 49.97 0 4338668..4340308 + 546 117626115 ubiB APECO1_2620 - putative ubiquinone biosynthesis protein UbiB 3790 45.19 -1 4340345..4340656 + 103 117626116 tatA APECO1_2619 - twin argininte translocase protein A 3791 54.84 0 4340660..4341175 + 171 117626117 tatB APECO1_2618 - sec-independent translocase 3792 51.99 0 4341178..4341954 + 258 117626118 tatC APECO1_2617 - TatABCE protein translocation system subunit 3793 54.59 0 4341984..4342778 + 264 117626119 tatD APECO1_2616 - DNase TatD 3794 49.28 0 4342775..4343263 - 162 117626120 rfaH APECO1_2615 - transcriptional activator RfaH 3795 53.41 0 4343430..4344923 + 497 117626121 ubiD APECO1_2614 - 3-octaprenyl-4-hydroxybenzoate decarboxylase 3796 52.28 0 4344969..4345670 + 233 117626122 fre APECO1_2613 - FMN reductase 3797 57.82 +1 4345953..4347116 - 387 117626123 fadA APECO1_2612 - 3-ketoacyl-CoA thiolase 3798 54.58 0 4347126..4349441 - 771 117626124 fadB APECO1_2611 - multifunctional fatty acid oxidation complex subunit alpha 3799 53.00 0 4349505..4350836 + 443 117626125 pepQ APECO1_2610 - Xaa-Pro dipeptidase 3800 55.34 0 4350833..4351450 + 205 117626126 yigZ APECO1_2609 - hypothetical protein 3801 52.89 0 4351489..4352940 + 483 117626127 trkH APECO1_2608 - potassium transporter 3802 50.92 0 4352952..4353497 + 181 117626128 hemG APECO1_2607 - protoporphyrinogen oxidase 3803 49.24 0 4359077..4359604 - 175 117626130 mobB APECO1_2605 - molybdopterin-guanine dinucleotide biosynthesis protein B 3804 50.60 0 4359586..4360170 - 194 117626131 mobA APECO1_2604 - molybdopterin-guanine dinucleotide biosynthesis protein A 3805 45.19 -1 4360240..4360509 + 89 117626132 - APECO1_2603 - hypothetical protein 3806 48.53 0 4360586..4361572 + 328 117626133 yihE APECO1_2602 - serine/threonine protein kinase 3807 48.01 0 4361589..4362215 + 208 117626134 dsbA APECO1_2601 - periplasmic protein disulfide isomerase I 3808 41.28 -2 4362328..4363800 + 490 117626135 yihF APECO1_2600 - hypothetical protein 3809 45.44 -1 4363841..4364773 - 310 117626136 yihG APECO1_2599 - putative endonuclease 3810 52.17 0 4365137..4367923 + 928 117626137 polA APECO1_2598 - DNA polymerase I 3811 52.78 0 4368305..4368952 - 215 117626138 yihA APECO1_2597 - GTPase EngB 3812 52.75 0 4369519..4370028 + 169 117626139 yihI APECO1_2596 - hypothetical protein 3813 53.04 0 4370211..4371590 + 459 117626140 hemN APECO1_2595 - coproporphyrinogen III oxidase 3814 56.38 +1 4371950..4373359 - 469 117626141 glnG APECO1_2594 - nitrogen regulation protein NR(I) 3815 55.24 0 4373371..4374420 - 349 117626142 glnL APECO1_2593 - nitrogen regulation protein NR(II) 3816 52.98 0 4374594..4376003 - 469 117626143 glnA APECO1_2592 - glutamine synthetase 3817 53.29 0 4376376..4378199 + 607 117626144 bipA APECO1_2591 - GTP-binding protein 3818 50.19 0 4378306..4379094 - 262 117626145 - APECO1_2590 - putative regulatory protein 3819 49.89 0 4379134..4380081 - 315 117626146 - APECO1_2589 - hypothetical protein 3820 50.21 0 4380133..4381080 + 315 117626147 - APECO1_2588 - hypothetical protein 3821 52.25 0 4381105..4381992 + 295 117626148 - APECO1_2587 - hypothetical protein 3822 52.92 0 4382025..4383035 + 336 117626149 - APECO1_2586 - putative dehydrogenase 3823 49.58 0 4383105..4384538 + 477 117626150 - APECO1_2585 - hypothetical protein 3824 46.30 0 4384637..4385986 + 449 117626151 - APECO1_2584 - putative shikimate transporter 3825 49.41 0 4385931..4386863 + 310 117626152 - APECO1_2583 - hypothetical protein 3826 49.44 0 4386983..4387603 + 206 117626153 - APECO1_2582 - phosphatase 3827 51.09 0 4387597..4388469 + 290 117626154 rbn APECO1_2581 - ribonuclease BN 3828 54.79 0 4388466..4388903 + 145 117626155 dtd APECO1_2580 - D-tyrosyl-tRNA deacylase 3829 54.04 0 4388900..4389889 + 329 117626156 yiiD APECO1_2579 - acetyltransferase 3830 51.02 0 4389953..4390936 - 327 117626157 - APECO1_2578 - putative lipase 3831 40.71 -2 4391090..4391401 + 103 117626158 - APECO1_2577 - hypothetical protein 3832 48.80 0 4391402..4391692 + 96 117626159 - APECO1_2576 - hypothetical protein 3833 48.39 0 4392051..4392329 + 92 117626160 - APECO1_2575 - hypothetical protein 3834 54.73 0 4393159..4394088 - 309 117626161 fdhE APECO1_2574 - formate dehydrogenase accessory protein FdhE 3835 52.52 0 4394085..4394720 - 211 117626162 fdoI APECO1_2573 - formate dehydrogenase-O subunit gamma 3836 55.59 0 4394717..4395619 - 300 117626163 fdoH APECO1_2572 - formate dehydrogenase-O, Fe-S subunit 3837 54.37 0 4395632..4398046 - 804 117626164 fdoG APECO1_25712 - formate dehydrogenase-O, large subunit 3838 55.61 0 4398095..4398682 - 195 117626165 fdoG APECO1_2571 - formate dehydrogenase-O, large subunit 3839 53.48 0 4398876..4399709 + 277 117626166 fdhD APECO1_2570 - formate dehydrogenase accessory protein 3840 44.62 -1 4400105..4400485 + 126 117626167 yiiG APECO1_2569 - hypothetical protein 3841 44.87 -1 4400839..4402233 + 464 117626168 - APECO1_2568 - putative glycoporin 3842 49.52 0 4402274..4402588 - 104 117626169 yiiL APECO1_2567 - hypothetical protein 3843 55.15 0 4402598..4403422 - 274 117626170 rhaD APECO1_2566 - rhamnulose-1-phosphate aldolase 3844 55.16 0 4403699..4404958 - 419 117626171 rhaA APECO1_2565 - L-rhamnose isomerase 3845 54.63 0 4404955..4406424 - 489 117626172 rhaB APECO1_2564 - rhamnulokinase 3846 51.73 0 4406712..4407548 + 278 117626173 rhaS APECO1_2563 - transcriptional activator RhaS 3847 49.84 0 4407532..4408470 + 312 117626174 rhaR APECO1_2562 - transcriptional activator RhaR 3848 51.98 0 4408467..4409501 - 344 117626175 rhaT APECO1_2561 - rhamnose-proton symporter 3849 53.11 0 4409780..4410406 + 208 117626176 sodA APECO1_2560 - superoxide dismutase 3850 52.74 0 4410666..4411649 + 327 162317563 kdgT APECO1_2559 - 2-keto-3-deoxygluconate permease 3851 51.74 0 4411783..4412472 + 229 117626178 yiiM APECO1_2558 - hypothetical protein 3852 54.66 0 4412578..4413951 - 457 117626179 cpxA APECO1_2557 - two-component sensor protein 3853 51.07 0 4413948..4414646 - 232 117626180 cpxR APECO1_2556 - DNA-binding transcriptional regulator CpxR 3854 50.00 0 4414793..4415296 + 167 117626181 cpxP APECO1_2555 - periplasmic repressor CpxP 3855 52.60 0 4415445..4416347 + 300 117626182 fieF APECO1_2554 - ferrous iron efflux protein F 3856 52.98 0 4416468..4417490 + 340 117626183 pfkA APECO1_2553 - 6-phosphofructokinase 3857 50.61 0 4417810..4418799 + 329 117626184 sbp APECO1_2552 - sulfate transporter subunit 3858 49.31 0 4418717..4419661 + 314 117626185 cdh APECO1_2551 - CDP-diacylglycerol pyrophosphatase 3859 52.99 0 4419716..4420483 - 255 117626186 tpiA APECO1_2550 - triosephosphate isomerase 3860 49.33 0 4420591..4421190 - 199 117626187 yiiQ APECO1_2549 - hypothetical protein 3861 48.75 0 4421291..4421731 + 146 117626188 yiiR APECO1_2548 - hypothetical protein 3862 47.00 0 4421943..4422242 + 99 117626189 yiiS APECO1_2547 - hypothetical protein 50.94 MEAN 4.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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