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Escherichia coli APEC O1, complete genome - 1..5082025 4428 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3718 49.28 0 4260707..4261810 + 367 117626044 rfe APECO1_2690 - UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase 3719 52.24 0 4261822..4262868 + 348 117626045 wzzE APECO1_2689 - lipopolysaccharide biosynthesis protein WzzE 3720 52.60 0 4262882..4264054 + 390 117626046 rffE APECO1_26882 - UDP-N-acetylglucosamine 2-epimerase 3721 53.60 0 4264051..4265313 + 420 117626047 wecC APECO1_2688 - UDP-N-acetyl-D-mannosamine dehydrogenase 3722 54.12 0 4265313..4266380 + 355 117626048 rffG APECO1_2687 - dTDP-glucose 4,6-dehydratase 3723 54.76 0 4266399..4267280 + 293 117626049 rffH APECO1_2686 - lipopolysaccharide biosynthesis protein RffH 3724 55.11 0 4267258..4267932 + 224 117626050 rffC APECO1_2685 - TDP-fucosamine acetyltransferase 3725 54.64 0 4267937..4269067 + 376 117626051 rffA APECO1_2684 - TDP-4-oxo-6-deoxy-D-glucose transaminase 3726 52.68 0 4269069..4270319 + 416 117626052 wzxE APECO1_2683 - O-antigen translocase 3727 52.50 0 4270316..4271395 + 359 117626053 rffT APECO1_2682 - 4-alpha-L-fucosyltransferase 3728 51.96 0 4271392..4272744 + 450 117626054 wecF APECO1_2681 - putative entero common antigen polymerase 3729 53.58 0 4272747..4273487 + 246 117626055 wecG APECO1_2680 - putative UDP-N-acetyl-D-mannosaminuronic acid transferase 3730 52.74 0 4273678..4275063 + 461 117626056 yifK APECO1_2679 - putative transport protein YifK 3731 51.29 0 4275749..4276984 + 411 117626057 aslB APECO1_2678 - putative regulator of arylsulfatase activity 3732 53.14 0 4277142..4278797 - 551 117626058 aslA APECO1_2677 - arylsulfatase-like enzyme 3733 55.05 0 4279476..4280672 - 398 117626059 hemY APECO1_2676 - putative protoheme IX biogenesis protein 3734 53.94 0 4280675..4281868 - 397 117626060 hemX APECO1_2675 - putative uroporphyrinogen III C-methyltransferase 3735 53.58 0 4281890..4282630 - 246 117626061 hemD APECO1_2674 - uroporphyrinogen-III synthase 3736 56.80 +1 4282627..4283589 - 320 117626062 hemC APECO1_2673 - porphobilinogen deaminase 3737 52.45 0 4284012..4286501 + 829 117626063 cyaA APECO1_2672 - adenylate cyclase 3738 51.40 0 4286541..4286861 - 106 117626064 cyaY APECO1_2671 - frataxin-like protein 3739 45.71 -1 4286909..4288225 - 438 117626065 - APECO1_2670 - hypothetical protein 3740 48.95 0 4288222..4288791 - 189 117626066 - APECO1_2669 - hypothetical protein 3741 50.71 0 4288876..4289721 - 281 117626067 - APECO1_2668 - hypothetical protein 3742 55.56 0 4290117..4290944 + 275 117626068 dapF APECO1_2667 - diaminopimelate epimerase 3743 55.93 +1 4290941..4291648 + 235 117626069 yigA APECO1_2666 - hypothetical protein 3744 54.29 0 4291645..4292541 + 298 117626070 xerC APECO1_2665 - site-specific tyrosine recombinase XerC 3745 56.35 +1 4292541..4293257 + 238 117626071 yigB APECO1_2664 - flavin mononucleotide phosphatase 3746 57.98 +1 4293341..4295503 + 720 117626072 uvrD APECO1_2663 - DNA-dependent helicase II 3747 48.06 0 4295548..4296450 - 300 117626073 - APECO1_2662 - hypothetical protein 3748 47.19 0 4296533..4297297 - 254 117626074 yigE APECO1_2661 - hypothetical protein 3749 53.10 0 4297667..4298617 + 316 117626075 corA APECO1_2660 - magnesium/nickel/cobalt transporter CorA 3750 33.53 -2 4298653..4299150 - 165 117626076 - APECO1_2659 - hypothetical protein 3751 32.86 -2 4299147..4299995 - 282 117626077 - APECO1_2658 - hypothetical protein 3752 50.62 0 4300306..4301196 - 296 117626078 rarD APECO1_2657 - putative chloramphenical resistance permease 3753 52.06 0 4301248..4301733 - 161 117626079 yigI APECO1_2656 - hypothetical protein 3754 52.07 0 4301880..4302749 + 289 117626080 pldA APECO1_2655 - phospholipase A 3755 54.25 0 4302868..4304703 + 611 117626081 recQ APECO1_2654 - ATP-dependent DNA helicase RecQ 3756 51.21 0 4304767..4305387 + 206 117626082 rhtC APECO1_2653 - threonine efflux system 3757 52.01 0 4305448..4306068 - 206 117626083 rhtB APECO1_2652 - homoserine/homoserine lactone efflux protein 3758 52.88 0 4306179..4307201 + 340 117626084 pldB APECO1_2651 - lysophospholipase L2 3759 50.44 0 4307092..4308009 + 305 117626085 - APECO1_2650 - putative sugar phosphatase 3760 55.11 0 4308085..4308984 + 299 117626086 yigM APECO1_2649 - putative inner membrane protein 3761 56.92 +1 4308872..4309825 - 317 117626087 metR APECO1_2648 - DNA-binding transcriptional activator, homocysteine-binding 3762 55.08 0 4309943..4312204 + 753 117626088 metE APECO1_2647 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 3763 39.53 -2 4312693..4312950 - 85 117626089 - APECO1_2646 - hypothetical protein 3764 38.21 -2 4312947..4313438 - 163 117626090 - APECO1_2645 - hypothetical protein 3765 40.82 -2 4313787..4314080 - 97 117626091 - APECO1_2644 - hypothetical protein 3766 49.58 0 4314532..4315122 + 196 117626092 - APECO1_2643 - putative sugar isomerase 3767 49.37 0 4315164..4316672 + 502 117626093 - APECO1_2642 - PTS system, glucose-specific IIBC component 3768 54.90 0 4316723..4318720 + 665 117626094 - APECO1_2641 - transketolase 3769 40.90 -2 4318750..4319595 - 281 117626095 - APECO1_2640 - putative transcriptional regulatory protein 3770 46.14 -1 4319796..4320701 - 301 117626096 - APECO1_2639 - putative transcriptional regulatory protein 3771 51.72 0 4320779..4322002 - 407 117626097 - APECO1_2638 - putative permease for cytosine/purines, uracil, thiamine, allantoin 3772 50.77 0 4322028..4322417 - 129 117626098 - APECO1_2637 - hypothetical protein 3773 54.34 0 4322434..4323390 - 318 162317564 - APECO1_2636 - carbamate kinase 3774 53.93 0 4323383..4324858 - 491 117626100 yahG APECO1_2635 - hypothetical protein 3775 52.44 0 4324804..4326363 - 519 117626101 yahF APECO1_2634 - hypothetical protein 3776 50.06 0 4326458..4327318 - 286 117626102 yahE APECO1_2633 - hypothetical protein 3777 50.22 0 4327324..4327992 - 222 117626103 - APECO1_2632 - putative isochorismatase hydrolase 3778 52.74 0 4328249..4329124 - 291 117626104 - APECO1_2631 - putative dienelactone hydrolase 3779 54.12 0 4329320..4330084 + 254 117626105 udp APECO1_2630 - uridine phosphorylase 3780 51.24 0 4330119..4331609 - 496 117626106 - APECO1_2629 - hypothetical protein 3781 51.08 0 4331622..4332128 - 168 117626107 - APECO1_2628 - hypothetical protein 3782 52.72 0 4332145..4333119 - 324 117626108 - APECO1_2627 - hypothetical protein 3783 54.86 0 4333280..4333804 + 174 117626109 - APECO1_2626 - putative aldolase 3784 53.03 0 4333763..4334767 - 334 117626110 - APECO1_2625 - putative 2-keto-3-deoxygalactokinase 3785 52.51 0 4334791..4335645 - 284 117626111 - APECO1_2624 - putative transcriptional regulatory protein 3786 52.45 0 4335775..4337202 + 475 117626112 rmuC APECO1_2623 - DNA recombination protein RmuC 3787 51.85 0 4337297..4338052 + 251 117626113 ubiE APECO1_2622 - ubiquinone/menaquinone biosynthesis methyltransferase 3788 55.82 +1 4338036..4338671 + 211 117626114 yigP APECO1_2621 - hypothetical protein 3789 49.97 0 4338668..4340308 + 546 117626115 ubiB APECO1_2620 - putative ubiquinone biosynthesis protein UbiB 3790 45.19 -1 4340345..4340656 + 103 117626116 tatA APECO1_2619 - twin argininte translocase protein A 3791 54.84 0 4340660..4341175 + 171 117626117 tatB APECO1_2618 - sec-independent translocase 3792 51.99 0 4341178..4341954 + 258 117626118 tatC APECO1_2617 - TatABCE protein translocation system subunit 3793 54.59 0 4341984..4342778 + 264 117626119 tatD APECO1_2616 - DNase TatD 3794 49.28 0 4342775..4343263 - 162 117626120 rfaH APECO1_2615 - transcriptional activator RfaH 3795 53.41 0 4343430..4344923 + 497 117626121 ubiD APECO1_2614 - 3-octaprenyl-4-hydroxybenzoate decarboxylase 3796 52.28 0 4344969..4345670 + 233 117626122 fre APECO1_2613 - FMN reductase 3797 57.82 +1 4345953..4347116 - 387 117626123 fadA APECO1_2612 - 3-ketoacyl-CoA thiolase 3798 54.58 0 4347126..4349441 - 771 117626124 fadB APECO1_2611 - multifunctional fatty acid oxidation complex subunit alpha 3799 53.00 0 4349505..4350836 + 443 117626125 pepQ APECO1_2610 - Xaa-Pro dipeptidase 3800 55.34 0 4350833..4351450 + 205 117626126 yigZ APECO1_2609 - hypothetical protein 3801 52.89 0 4351489..4352940 + 483 117626127 trkH APECO1_2608 - potassium transporter 3802 50.92 0 4352952..4353497 + 181 117626128 hemG APECO1_2607 - protoporphyrinogen oxidase 3803 49.24 0 4359077..4359604 - 175 117626130 mobB APECO1_2605 - molybdopterin-guanine dinucleotide biosynthesis protein B 3804 50.60 0 4359586..4360170 - 194 117626131 mobA APECO1_2604 - molybdopterin-guanine dinucleotide biosynthesis protein A 3805 45.19 -1 4360240..4360509 + 89 117626132 - APECO1_2603 - hypothetical protein 3806 48.53 0 4360586..4361572 + 328 117626133 yihE APECO1_2602 - serine/threonine protein kinase 3807 48.01 0 4361589..4362215 + 208 117626134 dsbA APECO1_2601 - periplasmic protein disulfide isomerase I 3808 41.28 -2 4362328..4363800 + 490 117626135 yihF APECO1_2600 - hypothetical protein 3809 45.44 -1 4363841..4364773 - 310 117626136 yihG APECO1_2599 - putative endonuclease 3810 52.17 0 4365137..4367923 + 928 117626137 polA APECO1_2598 - DNA polymerase I 3811 52.78 0 4368305..4368952 - 215 117626138 yihA APECO1_2597 - GTPase EngB 3812 52.75 0 4369519..4370028 + 169 117626139 yihI APECO1_2596 - hypothetical protein 3813 53.04 0 4370211..4371590 + 459 117626140 hemN APECO1_2595 - coproporphyrinogen III oxidase 3814 56.38 +1 4371950..4373359 - 469 117626141 glnG APECO1_2594 - nitrogen regulation protein NR(I) 3815 55.24 0 4373371..4374420 - 349 117626142 glnL APECO1_2593 - nitrogen regulation protein NR(II) 3816 52.98 0 4374594..4376003 - 469 117626143 glnA APECO1_2592 - glutamine synthetase 3817 53.29 0 4376376..4378199 + 607 117626144 bipA APECO1_2591 - GTP-binding protein 50.94 MEAN 4.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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