version 1.0
Escherichia coli APEC O1, complete genome - 1..5082025 4428 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2967 51.20 0 3411205..3412284 - 359 117625285 - APECO1_3442 - putative permease 2968 51.54 0 3412281..3413351 - 356 117625286 - APECO1_3441 - putative permease 2969 48.84 0 3413382..3413942 - 186 117625287 ytfJ APECO1_3440 - putative transcriptional regulator 2970 46.00 -1 3413942..3414778 - 278 117625288 - APECO1_3439 - hypothetical protein 2971 52.31 0 3414778..3415989 - 403 117625289 yghQ APECO1_3438 - hypothetical protein 2972 52.53 0 3416173..3416943 - 256 117625290 - APECO1_3437 - hypothetical protein 2973 49.72 0 3416963..3417676 - 237 117625291 yghS APECO1_3436 - putative ATP-binding protein YghS 2974 47.76 0 3417851..3418543 + 230 117625292 yghT APECO1_3435 - nucleoside triphosphate hydrolase domain-containing protein 2975 51.93 0 3418592..3420091 - 499 117625293 pitB APECO1_3434 - putative low-affinity inorganic phosphate transporter 2 2976 51.42 0 3420383..3422245 - 620 117625294 gsp APECO1_3433 - bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase 2977 53.22 0 3422399..3423313 + 304 117625295 yghU APECO1_3432 - putative glutathione S-transferase YghU 2978 54.55 0 3423707..3424102 - 131 117625296 hybF APECO1_3431 - hydrogenase nickel incorporation protein HybF 2979 53.78 0 3424041..3424529 - 162 117625297 hybE APECO1_3430 - hydrogenase 2-specific chaperone 2980 55.15 0 3424522..3425016 - 164 117625298 hybD APECO1_3429 - hydrogenase 2 maturation endopeptidase 2981 53.29 0 3425016..3426719 - 567 117625299 hybC APECO1_3428 - hydrogenase 2 large subunit 2982 53.01 0 3426716..3427894 - 392 117625300 hybB APECO1_3427 - putative hydrogenase 2 b cytochrome subunit 2983 54.71 0 3427884..3428870 - 328 117625301 hybA APECO1_3426 - hydrogenase 2 protein HybA 2984 54.42 0 3428873..3429991 - 372 117625302 hybO APECO1_3425 - hydrogenase 2 small subunit 2985 44.44 -1 3430180..3430467 - 95 117625303 yghW APECO1_3424 - hypothetical protein 2986 52.32 0 3430586..3431512 - 308 117625304 - APECO1_3423 - putative hydrolase 2987 52.07 0 3431630..3432670 + 346 117625305 yghZ APECO1_3422 - aldo-keto reductase 2988 47.47 0 3432710..3433204 - 164 117625306 yqhA APECO1_3421 - hypothetical protein 2989 53.94 0 3433392..3434279 + 295 117625307 yghA APECO1_3420 - oxidoreductase 2990 48.36 0 3434318..3434743 - 141 117625308 exbD APECO1_3419 - biopolymer transport protein ExbD 2991 52.65 0 3434750..3435484 - 244 117625309 exbB APECO1_3418 - biopolymer transport protein ExbB 2992 50.87 0 3435658..3436923 + 421 117625310 metC APECO1_3417 - cystathionine beta-lyase 2993 51.21 0 3437063..3437722 + 219 117625311 yghB APECO1_3416 - hypothetical protein 2994 50.19 0 3437762..3438829 - 355 117625312 yqhC APECO1_3415 - putative DNA-binding transcriptional regulator 2995 54.64 0 3438855..3440018 + 387 117625313 yqhD APECO1_3414 - putative alcohol dehydrogenase, NAD(P)-dependent 2996 50.72 0 3440123..3440950 + 275 117625314 dkgA APECO1_3413 - 2,5-diketo-D-gluconate reductase A 2997 47.36 0 3441150..3442076 + 308 117625315 yqhG APECO1_3412 - hypothetical protein 2998 48.45 0 3442127..3442384 + 85 117625316 yqhH APECO1_3411 - putative outer membrane lipoprotein 2999 54.28 0 3442426..3444645 - 739 117625317 ygiRQ APECO1_3410 - hypothetical protein 3000 44.40 -1 3444897..3445646 + 249 117625318 - APECO1_3409 - putative regulator 3001 47.73 0 3445969..3447441 + 490 117625319 - APECO1_3408 - putative oxidoreductase YdfI 3002 47.49 0 3447438..3448454 + 338 117625320 - APECO1_3407 - putative zinc-type alcohol dehydrogenase-like protein YjjN 3003 47.38 0 3448465..3449475 + 336 117625321 - APECO1_3406 - ureidoglycolate dehydrogenase 3004 41.97 -1 3449548..3450531 + 327 117625322 - APECO1_3405 - putative c4-dicarboxylate transport system binding protein 3005 38.51 -2 3450573..3451055 + 160 117625323 - APECO1_3404 - hypothetical protein 3006 45.59 -1 3451066..3452370 + 434 117625324 ygiK APECO1_3403 - c4-dicarboxylate permease 3007 55.84 +1 3452441..3453853 - 470 117625325 sufI APECO1_3402 - repressor protein for FtsI 3008 49.86 0 3453928..3454665 - 245 117625326 plsC APECO1_3401 - 1-acyl-sn-glycerol-3-phosphate acyltransferase 3009 55.07 0 3454900..3457158 - 752 117625327 parC APECO1_3400 - DNA topoisomerase IV subunit A 3010 52.24 0 3457296..3458903 - 535 117625328 ygiS APECO1_3399 - putative binding protein 3011 53.00 0 3459012..3459494 - 160 117625329 ygiV APECO1_3398 - putative transcriptional regulator 3012 51.40 0 3459547..3459939 - 130 117625330 ygiW APECO1_3397 - hypothetical protein 3013 52.58 0 3460091..3460750 + 219 117625331 ygiX APECO1_3396 - DNA-binding transcriptional regulator QseB 3014 52.81 0 3460747..3462096 + 449 117625332 qseC APECO1_3395 - sensor protein QseC 3015 33.63 -2 3462142..3462474 - 110 117625333 - APECO1_3394 - hypothetical protein 3016 35.02 -2 3462481..3463191 - 236 117625334 - APECO1_3393 - hypothetical protein 3017 32.50 -2 3463194..3463673 - 159 117625335 - APECO1_3392 - hypothetical protein 3018 49.83 0 3463923..3464504 + 193 117625336 mdaB APECO1_3391 - modulator of drug activity B 3019 52.03 0 3464894..3465781 - 295 117625338 - APECO1_3389 - putative phosphosugar isomerases 3020 49.01 0 3465778..3466785 - 335 117625339 - APECO1_3388 - iron ABC transporter substrate-binding protein 3021 50.95 0 3466736..3467785 - 349 117625340 - APECO1_3387 - iron ABC transporter permease 3022 54.37 0 3467782..3468765 - 327 117625341 - APECO1_3386 - iron ABC transporter permease 3023 49.26 0 3468762..3469571 - 269 117625342 fepC APECO1_3385 - ferric enterobactin transport ATP-binding protein FepC 3024 47.99 0 3469945..3472086 + 713 117625343 - APECO1_3384 - putative iron compound receptor 3025 53.67 0 3472150..3474042 - 630 117625344 parE APECO1_3383 - DNA topoisomerase IV subunit B 3026 53.95 0 3474071..3474652 - 193 117625345 yqiA APECO1_3382 - esterase YqiA 3027 57.61 +1 3474652..3475347 - 231 117625346 icc APECO1_3381 - cyclic 3',5'-adenosine monophosphate phosphodiesterase 3028 48.23 0 3475504..3475926 - 140 117625347 yqiB APECO1_3380 - hypothetical protein 3029 50.79 0 3475927..3476556 - 209 117625348 nudF APECO1_3379 - ADP-ribose pyrophosphatase NudF 3030 51.34 0 3476755..3478242 + 495 117625349 tolC APECO1_3378 - outer membrane channel protein 3031 55.74 +1 3478357..3479061 + 234 117625350 - APECO1_3377 - hypothetical protein 3032 50.99 0 3479067..3480227 + 386 117625351 ygiC APECO1_3376 - putative synthetase/amidase 3033 49.58 0 3480712..3482508 + 598 117625352 assT APECO1_3375 - arylsulfate sulfotransferase 3034 44.69 -1 3482526..3483194 + 222 117625353 - APECO1_3374 - putative disulfide isomerase 3035 48.51 0 3483209..3483880 + 223 117625354 - APECO1_3373 - putative disulfide oxidoreductase 3036 53.31 0 3483926..3484741 - 271 117625355 ygiD APECO1_3372 - hypothetical protein 3037 53.36 0 3484857..3485630 + 257 117625356 ygiE APECO1_3371 - zinc transporter ZupT 3038 44.33 -1 3486433..3486996 + 187 117625357 - APECO1_3370 - putative fimbrial protein 3039 46.89 0 3487083..3489605 + 840 117625358 yqiG APECO1_3369 - putative outer membrane usher protein YqiG precursor 3040 47.87 0 3489612..3490361 + 249 117625359 yqiH APECO1_3368 - putative periplasmic chaperone YqiH precursor 3041 39.43 -2 3490358..3491407 + 349 117625360 - APECO1_3367 - putative Yqi fimbrial adhesin 3042 53.06 0 3491461..3492114 - 217 117625361 ribB APECO1_3366 - 3,4-dihydroxy-2-butanone 4-phosphate synthase 3043 48.61 0 3492428..3492787 + 119 117625362 yqiC APECO1_3365 - hypothetical protein 3044 43.17 -1 3493292..3493921 + 209 117625363 yqiJ APECO1_3364 - hypothetical protein 3045 50.60 0 3493948..3495609 + 553 117625364 yqiK APECO1_3363 - hypothetical protein 3046 55.65 0 3496028..3497461 - 477 117625365 rfaE APECO1_3362 - bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 3047 55.54 0 3497509..3500421 - 970 117625366 glnE APECO1_3361 - bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 3048 54.69 0 3500372..3501673 - 433 117625367 ygiF APECO1_3360 - putative adenylate cyclase 3049 52.33 0 3501915..3502535 + 206 117625368 htrG APECO1_3359 - putative signal transduction protein 3050 56.66 +1 3502599..3503837 + 412 117625369 cca APECO1_3358 - multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 3051 52.92 0 3504025..3504846 - 273 117625370 uppP APECO1_3357 - undecaprenyl pyrophosphate phosphatase 3052 50.68 0 3504937..3505305 - 122 117625371 folB APECO1_3356 - bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase 3053 53.56 0 3505410..3506027 + 205 117625372 ygiH APECO1_3355 - putative glycerol-3-phosphate acyltransferase PlsY 3054 48.94 0 3506040..3507026 - 328 117625373 - APECO1_3354 - transcriptional activator TtdR 3055 53.29 0 3507179..3508090 + 303 117625374 ttdA APECO1_3353 - tartrate dehydratase subunit alpha 3056 53.80 0 3508087..3508692 + 201 117625375 ttdB APECO1_3352 - L(+)-tartrate dehydratase subunit beta 3057 54.58 0 3508740..3510203 + 487 117625376 ygjE APECO1_3351 - putative tartrate:succinate antiporter 3058 56.41 +1 3510246..3511259 - 337 117625377 ygjD APECO1_3350 - O-sialoglycoprotein endopeptidase 3059 52.29 0 3511823..3513568 + 581 117625378 dnaG APECO1_3349 - DNA primase 3060 53.04 0 3513763..3515604 + 613 117625379 rpoD APECO1_3348 - RNA polymerase sigma factor RpoD 3061 53.06 0 3515683..3516189 - 168 117625380 ygjF APECO1_3347 - G/U mismatch-specific DNA glycosylase 3062 56.47 +1 3516443..3517207 - 254 117625381 yqjH APECO1_3346 - putative siderophore interacting protein 3063 53.85 0 3517484..3518107 + 207 117625382 yqjI APECO1_3345 - hypothetical protein 3064 55.03 0 3518261..3519781 - 506 117625383 aer APECO1_3344 - aerotaxis sensor receptor, flavoprotein 3065 54.19 0 3520088..3521578 + 496 117625384 ygjG APECO1_3343 - putrescine--2-oxoglutarate aminotransferase 3066 51.32 0 3522171..3523154 + 327 117625386 ebgR APECO1_3341 - DNA-binding transcriptional repressor EbgR 50.94 MEAN 4.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0