version 1.0
Escherichia coli APEC O1, complete genome - 1..5082025 4428 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2731 43.19 -1 3128846..3130012 + 388 117625049 - APECO1_3710 - hypothetical protein 2732 37.80 -2 3130225..3130605 + 126 117625050 - APECO1_3709 - hypothetical protein 2733 34.77 -2 3130580..3131413 + 277 117625051 - APECO1_3708 - hypothetical protein 2734 36.39 -2 3131382..3131675 + 97 117625052 - APECO1_3707 - hypothetical protein 2735 59.57 +1 3133547..3136885 + 1112 117625053 - APECO1_3705 - hypothetical protein 2736 48.67 0 3136943..3137692 - 249 117625054 - APECO1_3704 - ISEc12 putative ATP-binding protein 2737 48.12 0 3137704..3139245 - 513 117625055 - APECO1_3703 - putative transposase for ISEc12 2738 61.11 +2 3139452..3141089 + 545 117625056 - APECO1_3702 - hypothetical protein 2739 42.36 -1 3141089..3142672 + 527 117625057 - APECO1_3701 - hypothetical protein 2740 36.03 -2 3142672..3143301 + 209 117625058 - APECO1_3700 - hypothetical protein 2741 29.50 -2 3143558..3144001 + 147 117625059 - APECO1_3699 - hypothetical protein 2742 57.98 +1 3144371..3146131 + 586 117625060 - APECO1_3698 - hypothetical protein 2743 59.26 +1 3146095..3147174 + 359 117625061 - APECO1_3697 - hypothetical protein 2744 50.84 0 3147155..3147691 + 178 117625062 - APECO1_3696 - hypothetical protein 2745 53.61 0 3147695..3148123 + 142 117625063 - APECO1_3695 - hypothetical protein 2746 54.83 0 3148123..3149499 + 458 117625064 - APECO1_3694 - hypothetical protein 2747 44.41 -1 3149801..3150748 - 315 117625065 - APECO1_3693 - 2-hydroxyacid dehydrogenase 2748 41.04 -2 3150820..3151416 - 198 117625066 - APECO1_3692 - phosphosugar isomerase 2749 37.67 -2 3151419..3152594 - 391 117625067 - APECO1_3691 - putative aminotransferase 2750 43.96 -1 3152594..3154174 - 526 117625068 - APECO1_3690 - PTS system, maltose and glucose-specific IIABC component 2751 33.90 -2 3154206..3155087 - 293 117625069 - APECO1_3689 - antiterminator 2752 52.98 0 3155288..3156631 - 447 117625070 amiC APECO1_3688 - N-acetylmuramoyl-L-alanine amidase 2753 52.50 0 3156863..3158104 + 413 117625071 argA APECO1_3687 - N-acetylglutamate synthase 2754 55.01 0 3158166..3159992 - 608 117625072 RecD APECO1_3686 - exonuclease V subunit alpha 2755 54.25 0 3159992..3163534 - 1180 117625073 RecB APECO1_3685 - exonuclease V subunit beta 2756 50.85 0 3163527..3166415 - 962 117625074 ptrA APECO1_3684 - protease III 2757 53.58 0 3166591..3169959 - 1122 117625075 recC APECO1_3683 - exonuclease V subunit gamma 2758 54.63 0 3169972..3170295 - 107 117625076 ppdC APECO1_3682 - hypothetical protein 2759 52.73 0 3170280..3170645 - 121 117625077 ygdB APECO1_3681 - hypothetical protein 2760 53.98 0 3170684..3171487 - 267 117625078 ppdB APECO1_3680 - hypothetical protein 2761 54.14 0 3171238..3171708 - 156 117625079 ppdA APECO1_3679 - hypothetical protein 2762 51.19 0 3171893..3172687 - 264 117625080 thyA APECO1_3678 - thymidylate synthase 2763 52.51 0 3172694..3173569 - 291 117625081 lgt APECO1_3677 - prolipoprotein diacylglyceryl transferase 2764 53.63 0 3173720..3175966 - 748 117625082 ptsP APECO1_3676 - fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain-containing protein 2765 48.82 0 3175979..3176443 - 154 117625083 ygdP APECO1_3675 - dinucleoside polyphosphate hydrolase 2766 53.62 0 3177194..3177883 + 229 117625084 mutH APECO1_3674 - DNA mismatch repair protein 2767 50.98 0 3177952..3178665 + 237 117625085 terC APECO1_3673 - integral membrane protein TerC 2768 54.47 0 3179129..3180169 + 346 117625086 tas APECO1_3672 - putative aldo-keto reductase 2769 54.86 0 3180201..3181394 - 397 117625087 ygeD APECO1_3671 - hypothetical protein 2770 52.22 0 3181387..3183546 - 719 117625088 aas APECO1_3670 - bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase 2771 52.91 0 3184132..3185163 + 343 117625089 galR APECO1_3669 - DNA-binding transcriptional regulator GalR 2772 52.49 0 3185170..3186432 - 420 117625090 lysA APECO1_3668 - diaminopimelate decarboxylase 2773 53.21 0 3186554..3187489 + 311 117625091 lysR APECO1_3667 - DNA-binding transcriptional regulator LysR 2774 50.65 0 3187476..3188168 - 230 117625092 ygeA APECO1_3666 - putative racemase 2775 51.73 0 3188297..3189715 - 472 117625093 araE APECO1_3665 - arabinose transporter 2776 51.71 0 3190030..3190791 - 253 117625094 kduD APECO1_3664 - 2-deoxy-D-gluconate 3-dehydrogenase 2777 49.52 0 3190821..3191549 - 242 117625095 kduI APECO1_3663 - 5-keto-4-deoxyuronate isomerase 2778 52.96 0 3191944..3193125 - 393 117625096 yqeF APECO1_3662 - acetyl-CoA acetyltransferase 2779 44.31 -1 3193380..3194609 + 409 117625097 yqeG APECO1_3661 - putative transport protein 2780 50.84 0 3195078..3195791 - 237 117625098 ygeR APECO1_3660 - putative lipoportein 2781 52.87 0 3196247..3198544 + 765 117625099 - APECO1_3659 - xanthine dehydrogenase subunit XdhA 2782 54.15 0 3198555..3199433 + 292 117625100 ygeT APECO1_3658 - xanthine dehydrogenase subunit XdhB 2783 45.98 -1 3199949..3201727 - 592 117625101 ygeV APECO1_3657 - DNA-binding transcriptional regulator 2784 49.79 0 3202203..3203393 + 396 117625102 ygeW APECO1_3656 - hypothetical protein 2785 53.13 0 3203451..3204647 + 398 117625103 ygeX APECO1_3655 - diaminopropionate ammonia-lyase 2786 50.91 0 3204705..3205916 + 403 117625104 ygeY APECO1_3654 - peptidase 2787 52.74 0 3205969..3207354 + 461 117625105 ygeZ APECO1_3653 - dihydropyrimidinase 2788 49.52 0 3207402..3208334 + 310 117625106 yqeA APECO1_3652 - carbamate kinase 2789 52.46 0 3208375..3210000 - 541 117625107 yqeB APECO1_3651 - putative synthase 2790 49.59 0 3210048..3210650 - 200 117625108 yqeC APECO1_3650 - hypothetical protein 2791 43.18 -1 3210922..3211500 + 192 117625109 ygfJ APECO1_3649 - hypothetical protein 2792 52.60 0 3211822..3214920 + 1032 117625110 ygfK APECO1_3648 - putative selenate reductase subunit YgfK 2793 52.60 0 3214923..3216251 + 442 117625111 ssnA APECO1_3647 - putative chlorohydrolase/aminohydrolase 2794 53.59 0 3216302..3217081 + 259 117625112 ygfM APECO1_3646 - putative selenate reductase subunit YgfM 2795 52.80 0 3217078..3219948 + 956 117625113 xdhD APECO1_3645 - putative selenate reductase subunit YgfN 2796 48.82 0 3220113..3221513 + 466 117625114 ygfO APECO1_3644 - transporter 2797 48.48 0 3221528..3222847 + 439 117625115 ygfP APECO1_3643 - guanine deaminase 2798 53.14 0 3222883..3224250 + 455 117625116 ygfQ APECO1_3642 - putative transporter 2799 54.81 0 3224286..3224774 - 162 117625117 ygfS APECO1_3641 - putative oxidoreductase, 4Fe-4S ferredoxin-type subunit 2800 52.71 0 3224774..3226708 - 644 117625118 ygfT APECO1_3640 - putative oxidoreductase Fe-S binding subunit 2801 49.14 0 3227060..3228577 + 505 117625119 ygfU APECO1_3639 - putative purine permease YgfU 2802 50.64 0 3228827..3229375 + 182 117625120 - APECO1_3638 - isopentenyl-diphosphate delta-isomerase 2803 52.57 0 3229418..3230935 - 505 117625121 lysS APECO1_3637 - lysyl-tRNA synthetase 2804 53.40 0 3230945..3231826 - 293 117625122 prfB APECO1_3636 - peptide chain release factor 2 2805 56.87 +1 3232134..3233726 - 530 117625123 - APECO1_3635 - ssDNA exonuclease RecJ 2806 48.10 0 3233873..3234583 - 236 117625124 dsbC APECO1_3634 - thiol:disulfide interchange protein DsbC 2807 53.84 0 3234608..3235402 - 264 117625125 xerD APECO1_3633 - site-specific tyrosine recombinase XerD 2808 51.72 0 3235616..3236137 + 173 117625126 fldB APECO1_3632 - flavodoxin FldB 2809 54.60 0 3236177..3236491 - 104 117625127 - APECO1_3631 - hypothetical protein 2810 49.06 0 3236565..3236831 - 88 117625128 - APECO1_3630 - hypothetical protein 2811 54.23 0 3237074..3238054 + 326 117625129 ygfZ APECO1_3629 - putative global regulator 2812 52.12 0 3238131..3238790 - 219 117625130 yqfA APECO1_3628 - putative oxidoreductase, inner membrane subunit 2813 44.87 -1 3238954..3239265 - 103 117625131 - APECO1_3627 - hypothetical protein 2814 51.39 0 3239304..3240743 + 479 117625132 bglA APECO1_3626 - 6-phospho-beta-glucosidase BglA 2815 55.50 0 3240909..3243782 - 957 117625133 gcvP APECO1_3625 - glycine dehydrogenase 2816 52.05 0 3243900..3244289 - 129 117625134 gcvH APECO1_3624 - glycine cleavage system protein H 2817 53.52 0 3244313..3245476 - 387 117625135 gcvT APECO1_3623 - glycine cleavage system aminomethyltransferase T 2818 54.61 0 3245855..3247057 - 400 117625136 visC APECO1_3622 - hypothetical protein 2819 59.54 +1 3247080..3248258 - 392 117625137 ubiH APECO1_3621 - 2-octaprenyl-6-methoxyphenyl hydroxylase 2820 52.19 0 3248255..3249580 - 441 117625138 pepB APECO1_3620 - proline aminopeptidase P II 2821 52.48 0 3249606..3250190 - 194 117625139 ygfB APECO1_3619 - hypothetical protein 2822 46.67 0 3250352..3250681 + 109 117625140 - APECO1_3618 - Z-ring-associated protein 2823 52.07 0 3250783..3251529 + 248 117625141 - APECO1_3617 - putative ligase 2824 52.23 0 3251919..3253151 - 410 117625142 serA APECO1_3616 - D-3-phosphoglycerate dehydrogenase 2825 51.44 0 3253407..3254102 - 231 117625143 rpiA APECO1_3615 - ribose-5-phosphate isomerase A 2826 54.36 0 3254493..3255386 + 297 162317571 iciA APECO1_3614 - chromosome replication initiation inhibitor protein 2827 52.75 0 3255589..3256644 + 351 117625145 - APECO1_3613 - hypothetical protein 2828 44.37 -1 3256641..3257537 - 298 117625146 ygfI APECO1_3612 - putative transcriptional regulator YgfI 2829 52.68 0 3257695..3258402 - 235 117625147 yggE APECO1_3611 - hypothetical protein 2830 50.76 0 3258528..3259118 - 196 117625148 yggA APECO1_3610 - arginine exporter protein 50.94 MEAN 4.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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