version 1.0
Escherichia coli APEC O1, complete genome - 1..5082025 4428 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2371 50.97 0 2733475..2735016 + 513 117624686 ppx APECO1_4067 - exopolyphosphatase 2372 46.78 0 2735113..2737299 - 728 117624687 yfgF APECO1_4066 - hypothetical protein 2373 43.07 -1 2737516..2737782 - 88 117624688 - APECO1_4065 - hypothetical protein 2374 47.40 0 2738153..2738671 + 172 117624689 yfgH APECO1_4064 - putative outer membrane lipoprotein 2375 48.89 0 2738687..2739226 + 179 117624690 yfgI APECO1_4063 - hypothetical protein 2376 51.41 0 2739422..2739919 - 165 117624691 - APECO1_4062 - putative phage lysis protein 2377 54.29 0 2739916..2740545 - 209 117624692 - APECO1_4061 - putative endolysin 2378 45.31 -1 2740535..2740843 - 102 117624693 - APECO1_4060 - putative holin 2379 48.89 0 2740830..2741234 - 134 117624694 - APECO1_4059 - hypothetical protein 2380 44.74 -1 2741541..2744660 - 1039 117624695 - APECO1_4058 - hypothetical protein 2381 42.78 -1 2744733..2745113 + 126 117624696 - APECO1_4057 - hypothetical protein 2382 53.45 0 2745429..2746124 + 231 117624697 - APECO1_4056 - putative anti-repressor protein 2383 40.29 -2 2747195..2747611 - 138 117624698 - APECO1_4055 - hypothetical protein 2384 49.45 0 2747795..2750269 - 824 117624699 - APECO1_4054 - hypothetical protein 2385 51.14 0 2750275..2752077 - 600 117624700 - APECO1_4053 - hypothetical protein 2386 49.05 0 2752074..2754587 - 837 117624701 - APECO1_4052 - hypothetical protein 2387 53.33 0 2754600..2755139 - 179 117624702 - APECO1_4051 - hypothetical protein 2388 50.54 0 2755139..2755603 - 154 117624703 - APECO1_4050 - hypothetical protein 2389 49.84 0 2755603..2758074 - 823 117624704 - APECO1_4049 - hypothetical protein 2390 51.16 0 2758074..2758679 - 201 117624705 - APECO1_4048 - hypothetical protein 2391 50.91 0 2758679..2759008 - 109 117624706 - APECO1_4047 - hypothetical protein 2392 49.57 0 2759053..2759397 - 114 117624707 - APECO1_4046 - hypothetical protein 2393 51.14 0 2759399..2759836 - 145 117624708 - APECO1_4045 - hypothetical protein 2394 50.05 0 2759888..2760880 - 330 117624709 - APECO1_4044 - hypothetical protein 2395 51.14 0 2760889..2761590 - 233 117624710 - APECO1_4043 - hypothetical protein 2396 51.52 0 2761587..2761883 - 98 117624711 - APECO1_4042 - hypothetical protein 2397 51.79 0 2761880..2763559 - 559 117624712 - APECO1_4041 - putative tail protein 2398 44.62 -1 2764483..2764863 + 126 117624714 - APECO1_4039 - hypothetical protein 2399 54.40 0 2764954..2766429 - 491 117624715 - APECO1_4038 - putative phage terminase, large subunit 2400 48.18 0 2766426..2767031 - 201 117624716 - APECO1_4037 - putative phage terminase, small subunit 2401 57.18 +1 2767327..2767674 - 115 117624717 - APECO1_4036 - hypothetical protein 2402 48.02 0 2767780..2768310 - 176 117624718 - APECO1_4035 - hypothetical protein 2403 52.42 0 2768307..2768720 - 137 117624719 - APECO1_4034 - hypothetical protein 2404 45.28 -1 2768886..2769203 - 105 117624720 - APECO1_4033 - hypothetical protein 2405 50.21 0 2769200..2769679 - 159 117624721 - APECO1_4032 - hypothetical protein 2406 50.43 0 2769741..2770085 - 114 117624722 - APECO1_4031 - hypothetical protein 2407 52.51 0 2770203..2770979 - 258 117624723 - APECO1_4030 - hypothetical protein 2408 47.94 0 2770951..2771799 - 282 117624724 - APECO1_4029 - hypothetical protein 2409 50.60 0 2772508..2773092 + 194 117624725 - APECO1_4028 - putative repressor protein 2410 49.84 0 2773386..2773700 + 104 117624726 - APECO1_4027 - hypothetical protein 2411 47.33 0 2773697..2774596 + 299 117624727 - APECO1_4026 - hypothetical protein 2412 47.41 0 2774606..2775628 + 340 117624728 recT APECO1_4025 - recombination and repair protein RecT 2413 53.01 0 2775678..2775926 + 82 117624729 - APECO1_4024 - putative phage regulatory protein 2414 48.33 0 2776036..2776335 + 99 117624730 - APECO1_4023 - hypothetical protein 2415 49.46 0 2776328..2776978 + 216 117624731 - APECO1_4022 - putative adenine methylase 2416 51.79 0 2776855..2777634 + 259 117624732 - APECO1_4021 - hypothetical protein 2417 48.93 0 2777637..2778893 - 418 117624733 - APECO1_4020 - integrase-like protein 2418 54.06 0 2779086..2780663 - 525 117624734 guaA APECO1_4019 - bifunctional GMP synthase/glutamine amidotransferase protein 2419 54.43 0 2780732..2782267 - 511 117624735 guaB APECO1_4018 - inositol-5-monophosphate dehydrogenase 2420 54.25 0 2782360..2783736 + 458 117624736 xseA APECO1_4017 - exodeoxyribonuclease VII large subunit 2421 51.53 0 2783805..2791856 - 2683 117624737 - APECO1_4016 - RatA-like protein 2422 52.25 0 2791977..2792954 - 325 117624738 sinI APECO1_4015 - SinI-like protein 2423 48.92 0 2793009..2795240 - 743 117624739 sinH APECO1_4014 - putative intimin/invasin (SinH-like protein) 2424 52.25 0 2795727..2797238 - 503 117624740 engA APECO1_4013 - GTP-binding protein EngA 2425 53.10 0 2797317..2798495 - 392 117624741 yfgL APECO1_4012 - outer membrane protein assembly complex subunit YfgL 2426 49.60 0 2798506..2799126 - 206 117624742 yfgM APECO1_4011 - hypothetical protein 2427 54.59 0 2799144..2800418 - 424 117624743 hisS APECO1_4010 - histidyl-tRNA synthetase 2428 52.90 0 2800529..2801647 - 372 117624744 ispG APECO1_4009 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2429 53.57 0 2801674..2802681 - 335 117624745 yfgA APECO1_4008 - hypothetical protein 2430 52.55 0 2802966..2804120 - 384 117624746 yfgB APECO1_4007 - hypothetical protein 2431 51.85 0 2804270..2804701 - 143 117624747 ndk APECO1_4006 - nucleoside diphosphate kinase 2432 56.72 +1 2804850..2807162 - 770 117624748 pbpC APECO1_4005 - penicillin-binding protein 1C 2433 53.12 0 2807163..2812124 - 1653 117624749 yfhM APECO1_4004 - putative lipoprotein YfhM 2434 50.35 0 2812172..2813176 + 334 117624750 sseA APECO1_4003 - 3-mercaptopyruvate sulfurtransferase 2435 47.07 0 2813669..2814454 - 261 117624751 sseB APECO1_4002 - enhanced serine sensitivity protein SseB 2436 56.31 +1 2814587..2815870 - 427 117624752 pepB APECO1_4001 - aminopeptidase B 2437 52.38 0 2816141..2816476 - 111 117624753 fdx APECO1_4000 - [2Fe-2S] ferredoxin 2438 57.38 +1 2816478..2818382 - 634 117624754 hscA APECO1_3999 - chaperone protein HscA 2439 51.74 0 2818345..2818860 - 171 117624755 hscB APECO1_3998 - co-chaperone HscB 2440 51.23 0 2818956..2819279 - 107 117624756 iscA APECO1_3997 - iron-sulfur cluster assembly protein 2441 49.35 0 2819296..2819682 - 128 117624757 iscU APECO1_3996 - scaffold protein 2442 52.54 0 2819710..2820948 - 412 117624758 iscS APECO1_3995 - cysteine desulfurase 2443 53.37 0 2821036..2821524 - 162 117624759 iscR APECO1_3994 - DNA-binding transcriptional regulator IscR 2444 54.79 0 2821794..2822534 - 246 117624760 yfhQ APECO1_3993 - putative methyltransferase 2445 54.23 0 2822653..2823456 + 267 117624761 suhB APECO1_3992 - inositol monophosphatase 2446 50.00 0 2823574..2824455 + 293 117624762 yfhR APECO1_3991 - putative peptidase 2447 51.84 0 2824625..2825926 + 433 117624763 csiE APECO1_3990 - stationary phase inducible protein CsiE 2448 56.75 +1 2825918..2827057 - 379 117624764 hcaT APECO1_3989 - putative 3-phenylpropionic acid transporter 2449 48.93 0 2827381..2827848 + 155 117624765 yphA APECO1_3988 - hypothetical protein 2450 54.30 0 2828008..2828880 - 290 117624766 yphB APECO1_3987 - hypothetical protein 2451 54.06 0 2828892..2829986 - 364 117624767 yphC APECO1_3986 - putative oxidoreductase, Zn-dependent and NAD(P)-binding 2452 55.26 0 2830019..2831017 - 332 117624768 yphD APECO1_3985 - ABC-type sugar transport system permease component YphD 2453 55.82 +1 2831042..2832553 - 503 117624769 yphE APECO1_3984 - ABC-type sugar transport system, ATP-binding component YphE 2454 45.63 -1 2832576..2833559 - 327 117624770 yphF APECO1_3983 - ABC-type sugar transport system, periplasmic component YphF 2455 54.84 0 2833656..2836937 - 1093 117624771 yphG APECO1_3982 - hypothetical protein 2456 51.42 0 2837055..2838248 + 397 117624772 ychA APECO1_3981 - putative transcriptional regulator YchA 2457 52.70 0 2838312..2839571 - 419 117624773 glyA APECO1_3980 - serine hydroxymethyltransferase 2458 52.23 0 2839894..2841084 + 396 117624774 hmpA APECO1_3979 - nitric oxide dioxygenase 2459 50.44 0 2841129..2841467 - 112 117624775 glnB APECO1_3978 - nitrogen regulatory protein P-II 1 2460 54.95 0 2841528..2842901 - 457 117624776 yfhA APECO1_3977 - putative DNA-binding response regulator in two-component system 2461 54.58 0 2842852..2843571 - 239 117624777 yfhG APECO1_3976 - hypothetical protein 2462 53.07 0 2843730..2845112 - 460 117624778 yfhK APECO1_3975 - putative sensor-like histidine kinase YfhK 2463 56.66 +1 2845733..2849620 - 1295 117624779 purL APECO1_3974 - phosphoribosylformylglycinamidine synthase 2464 50.46 0 2850019..2851437 + 472 117624780 yfhD APECO1_3973 - putative transglycosylase 2465 52.89 0 2851434..2851970 - 178 117624781 tadA APECO1_3972 - tRNA-specific adenosine deaminase 2466 50.81 0 2852767..2853687 + 306 117624782 yfhH APECO1_3970 - putative DNA-binding transcriptional regulator 2467 44.83 -1 2853743..2854003 + 86 117624783 yfhL APECO1_3969 - putative 4Fe-4S cluster-containing protein 2468 49.87 0 2854698..2855078 - 126 117624784 acpS APECO1_3968 - 4'-phosphopantetheinyl transferase 2469 55.42 0 2855078..2855824 - 248 117624785 pdxJ APECO1_3967 - pyridoxal phosphate biosynthetic protein PdxJ 2470 54.18 0 2855821..2856549 - 242 117624786 recO APECO1_3966 - DNA repair protein RecO 50.94 MEAN 4.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0