version 1.0
Escherichia coli APEC O1, complete genome - 1..5082025 4428 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2340 58.58 +1 2695683..2696486 - 267 117624655 eutT APECO1_4098 - putative cobalamin adenosyltransferase in ethanolamine utilization 2341 53.99 0 2696483..2697184 - 233 117624656 eutQ APECO1_4097 - ethanolamine utilization protein EutQ 2342 50.21 0 2697159..2697638 - 159 117624657 eutP APECO1_4096 - ethanolamine utilization protein EutP 2343 50.89 0 2697651..2697986 - 111 117624658 eutS APECO1_4095 - ethanolamine utilization protein EutS 2344 54.21 0 2698279..2700558 - 759 117624659 - APECO1_4094 - malic enzyme 2345 50.26 0 2700847..2701797 + 316 117624660 talA APECO1_4093 - transaldolase A 2346 54.19 0 2701817..2703820 + 667 117624661 tktB APECO1_4092 - transketolase 2347 54.31 0 2703897..2704940 - 347 117624662 ypfG APECO1_4091 - hypothetical protein 2348 48.26 0 2705066..2705641 - 191 117624663 yffH APECO1_4090 - putative NUDIX hydrolase 2349 55.30 0 2705709..2707688 - 659 117624664 aegA APECO1_4089 - putative oxidoreductase Fe-S binding subunit 2350 52.33 0 2707879..2709594 + 571 117624665 narQ APECO1_4088 - nitrate/nitrite sensor protein NarQ 2351 54.50 0 2709758..2712871 + 1037 117624666 acrD APECO1_4087 - aminoglycoside/multidrug efflux system 2352 46.22 0 2713410..2713766 + 118 117624667 yffB APECO1_4086 - hypothetical protein 2353 53.10 0 2713770..2714897 + 375 117624668 dapE APECO1_4085 - succinyl-diaminopimelate desuccinylase 2354 53.80 0 2715206..2715928 - 240 117624669 ypfH APECO1_4084 - esterase YpfH 2355 54.66 0 2715978..2717993 - 671 117624670 ypfI APECO1_4083 - hypothetical protein 2356 53.12 0 2718008..2718871 - 287 117624671 ypfJ APECO1_4082 - hypothetical protein 2357 52.01 0 2719039..2719761 - 240 117624672 purC APECO1_4081 - phosphoribosylaminoimidazole-succinocarboxamide synthase 2358 55.36 0 2719965..2720999 - 344 117624673 nlpB APECO1_4080 - lipoprotein 2359 51.88 0 2721016..2721894 - 292 117624674 dapA APECO1_4079 - dihydrodipicolinate synthase 2360 50.55 0 2722067..2722612 + 181 117624675 gcvR APECO1_4078 - glycine cleavage system transcriptional repressor 2361 49.26 0 2722612..2723082 + 156 117624676 bcp APECO1_4077 - thioredoxin-dependent thiol peroxidase 2362 54.05 0 2723181..2724242 - 353 117624677 yfgO APECO1_4076 - putative permease PerM 2363 53.55 0 2724455..2725918 + 487 117624678 yfgC APECO1_4075 - putative peptidase YfgC 2364 51.39 0 2725939..2726298 + 119 117624679 yfgD APECO1_4074 - putative oxidoreductase YfgD 2365 53.41 0 2726436..2727182 - 248 117624680 had APECO1_4073 - DNA replication initiation factor 2366 52.09 0 2727232..2728521 - 429 117624681 uraA APECO1_4072 - uracil transporter 2367 52.95 0 2728607..2729233 - 208 117624682 upp APECO1_4071 - uracil phosphoribosyltransferase 2368 52.80 0 2729542..2730594 + 350 117624683 purM APECO1_4070 - phosphoribosylaminoimidazole synthetase 2369 53.68 0 2730594..2731232 + 212 117624684 purN APECO1_4069 - phosphoribosylglycinamide formyltransferase 2370 48.91 0 2731404..2733470 + 688 117624685 ppk APECO1_4068 - polyphosphate kinase 2371 50.97 0 2733475..2735016 + 513 117624686 ppx APECO1_4067 - exopolyphosphatase 2372 46.78 0 2735113..2737299 - 728 117624687 yfgF APECO1_4066 - hypothetical protein 2373 43.07 -1 2737516..2737782 - 88 117624688 - APECO1_4065 - hypothetical protein 2374 47.40 0 2738153..2738671 + 172 117624689 yfgH APECO1_4064 - putative outer membrane lipoprotein 2375 48.89 0 2738687..2739226 + 179 117624690 yfgI APECO1_4063 - hypothetical protein 2376 51.41 0 2739422..2739919 - 165 117624691 - APECO1_4062 - putative phage lysis protein 2377 54.29 0 2739916..2740545 - 209 117624692 - APECO1_4061 - putative endolysin 2378 45.31 -1 2740535..2740843 - 102 117624693 - APECO1_4060 - putative holin 2379 48.89 0 2740830..2741234 - 134 117624694 - APECO1_4059 - hypothetical protein 2380 44.74 -1 2741541..2744660 - 1039 117624695 - APECO1_4058 - hypothetical protein 2381 42.78 -1 2744733..2745113 + 126 117624696 - APECO1_4057 - hypothetical protein 2382 53.45 0 2745429..2746124 + 231 117624697 - APECO1_4056 - putative anti-repressor protein 2383 40.29 -2 2747195..2747611 - 138 117624698 - APECO1_4055 - hypothetical protein 2384 49.45 0 2747795..2750269 - 824 117624699 - APECO1_4054 - hypothetical protein 2385 51.14 0 2750275..2752077 - 600 117624700 - APECO1_4053 - hypothetical protein 2386 49.05 0 2752074..2754587 - 837 117624701 - APECO1_4052 - hypothetical protein 2387 53.33 0 2754600..2755139 - 179 117624702 - APECO1_4051 - hypothetical protein 2388 50.54 0 2755139..2755603 - 154 117624703 - APECO1_4050 - hypothetical protein 2389 49.84 0 2755603..2758074 - 823 117624704 - APECO1_4049 - hypothetical protein 2390 51.16 0 2758074..2758679 - 201 117624705 - APECO1_4048 - hypothetical protein 2391 50.91 0 2758679..2759008 - 109 117624706 - APECO1_4047 - hypothetical protein 2392 49.57 0 2759053..2759397 - 114 117624707 - APECO1_4046 - hypothetical protein 2393 51.14 0 2759399..2759836 - 145 117624708 - APECO1_4045 - hypothetical protein 2394 50.05 0 2759888..2760880 - 330 117624709 - APECO1_4044 - hypothetical protein 2395 51.14 0 2760889..2761590 - 233 117624710 - APECO1_4043 - hypothetical protein 2396 51.52 0 2761587..2761883 - 98 117624711 - APECO1_4042 - hypothetical protein 2397 51.79 0 2761880..2763559 - 559 117624712 - APECO1_4041 - putative tail protein 2398 44.62 -1 2764483..2764863 + 126 117624714 - APECO1_4039 - hypothetical protein 2399 54.40 0 2764954..2766429 - 491 117624715 - APECO1_4038 - putative phage terminase, large subunit 2400 48.18 0 2766426..2767031 - 201 117624716 - APECO1_4037 - putative phage terminase, small subunit 2401 57.18 +1 2767327..2767674 - 115 117624717 - APECO1_4036 - hypothetical protein 2402 48.02 0 2767780..2768310 - 176 117624718 - APECO1_4035 - hypothetical protein 2403 52.42 0 2768307..2768720 - 137 117624719 - APECO1_4034 - hypothetical protein 2404 45.28 -1 2768886..2769203 - 105 117624720 - APECO1_4033 - hypothetical protein 2405 50.21 0 2769200..2769679 - 159 117624721 - APECO1_4032 - hypothetical protein 2406 50.43 0 2769741..2770085 - 114 117624722 - APECO1_4031 - hypothetical protein 2407 52.51 0 2770203..2770979 - 258 117624723 - APECO1_4030 - hypothetical protein 2408 47.94 0 2770951..2771799 - 282 117624724 - APECO1_4029 - hypothetical protein 2409 50.60 0 2772508..2773092 + 194 117624725 - APECO1_4028 - putative repressor protein 2410 49.84 0 2773386..2773700 + 104 117624726 - APECO1_4027 - hypothetical protein 2411 47.33 0 2773697..2774596 + 299 117624727 - APECO1_4026 - hypothetical protein 2412 47.41 0 2774606..2775628 + 340 117624728 recT APECO1_4025 - recombination and repair protein RecT 2413 53.01 0 2775678..2775926 + 82 117624729 - APECO1_4024 - putative phage regulatory protein 2414 48.33 0 2776036..2776335 + 99 117624730 - APECO1_4023 - hypothetical protein 2415 49.46 0 2776328..2776978 + 216 117624731 - APECO1_4022 - putative adenine methylase 2416 51.79 0 2776855..2777634 + 259 117624732 - APECO1_4021 - hypothetical protein 2417 48.93 0 2777637..2778893 - 418 117624733 - APECO1_4020 - integrase-like protein 2418 54.06 0 2779086..2780663 - 525 117624734 guaA APECO1_4019 - bifunctional GMP synthase/glutamine amidotransferase protein 2419 54.43 0 2780732..2782267 - 511 117624735 guaB APECO1_4018 - inositol-5-monophosphate dehydrogenase 2420 54.25 0 2782360..2783736 + 458 117624736 xseA APECO1_4017 - exodeoxyribonuclease VII large subunit 2421 51.53 0 2783805..2791856 - 2683 117624737 - APECO1_4016 - RatA-like protein 2422 52.25 0 2791977..2792954 - 325 117624738 sinI APECO1_4015 - SinI-like protein 2423 48.92 0 2793009..2795240 - 743 117624739 sinH APECO1_4014 - putative intimin/invasin (SinH-like protein) 2424 52.25 0 2795727..2797238 - 503 117624740 engA APECO1_4013 - GTP-binding protein EngA 2425 53.10 0 2797317..2798495 - 392 117624741 yfgL APECO1_4012 - outer membrane protein assembly complex subunit YfgL 2426 49.60 0 2798506..2799126 - 206 117624742 yfgM APECO1_4011 - hypothetical protein 2427 54.59 0 2799144..2800418 - 424 117624743 hisS APECO1_4010 - histidyl-tRNA synthetase 2428 52.90 0 2800529..2801647 - 372 117624744 ispG APECO1_4009 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2429 53.57 0 2801674..2802681 - 335 117624745 yfgA APECO1_4008 - hypothetical protein 2430 52.55 0 2802966..2804120 - 384 117624746 yfgB APECO1_4007 - hypothetical protein 2431 51.85 0 2804270..2804701 - 143 117624747 ndk APECO1_4006 - nucleoside diphosphate kinase 2432 56.72 +1 2804850..2807162 - 770 117624748 pbpC APECO1_4005 - penicillin-binding protein 1C 2433 53.12 0 2807163..2812124 - 1653 117624749 yfhM APECO1_4004 - putative lipoprotein YfhM 2434 50.35 0 2812172..2813176 + 334 117624750 sseA APECO1_4003 - 3-mercaptopyruvate sulfurtransferase 2435 47.07 0 2813669..2814454 - 261 117624751 sseB APECO1_4002 - enhanced serine sensitivity protein SseB 2436 56.31 +1 2814587..2815870 - 427 117624752 pepB APECO1_4001 - aminopeptidase B 2437 52.38 0 2816141..2816476 - 111 117624753 fdx APECO1_4000 - [2Fe-2S] ferredoxin 2438 57.38 +1 2816478..2818382 - 634 117624754 hscA APECO1_3999 - chaperone protein HscA 2439 51.74 0 2818345..2818860 - 171 117624755 hscB APECO1_3998 - co-chaperone HscB 50.94 MEAN 4.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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