version 1.0
Escherichia coli APEC O1, complete genome - 1..5082025 4428 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2233 50.00 0 2583715..2584170 - 151 117624547 - APECO1_4208 - head assembly protein 2234 49.15 0 2584170..2584871 - 233 117624548 - APECO1_4207 - putative DNA stabilization protein 2235 50.81 0 2584871..2586289 - 472 117624549 - APECO1_4206 - putative DNA stabilization protein 2236 48.92 0 2586299..2586760 - 153 117624550 - APECO1_4205 - putative DNA stabilization protein 2237 50.64 0 2586971..2588224 - 417 117624551 - APECO1_4204 - hypothetical protein 2238 50.67 0 2588243..2589136 - 297 117624552 - APECO1_4203 - putative phage scaffold protein 2239 51.66 0 2589227..2591425 - 732 117624553 - APECO1_4202 - putative phage portal protein 2240 51.20 0 2591427..2592842 - 471 117624554 - APECO1_4201 - phage terminase large subunit 2241 47.39 0 2592839..2593279 - 146 117624555 - APECO1_4200 - hypothetical protein 2242 46.91 0 2593282..2593524 - 80 117624556 - APECO1_4199 - hypothetical protein 2243 44.44 -1 2593752..2594363 - 203 117624557 - APECO1_4198 - hypothetical protein 2244 50.91 0 2594640..2595077 - 145 117624558 - APECO1_4197 - hypothetical protein 2245 50.31 0 2595074..2595550 - 158 117624559 - APECO1_4196 - putative endolysin 2246 48.46 0 2595534..2595857 - 107 117624560 - APECO1_4195 - putative holin 2247 45.09 -1 2596454..2596972 - 172 117624561 - APECO1_4194 - putative antitermination protein 2248 49.04 0 2597154..2597516 - 120 117624562 - APECO1_4193 - Holliday junction resolvase 2249 51.89 0 2597513..2597803 - 96 117624563 - APECO1_4192 - hypothetical protein 2250 47.03 0 2597803..2598525 - 240 117624564 roi APECO1_4191 - DNA-binding protein Roi 2251 43.19 -1 2598687..2599112 - 141 117624565 - APECO1_4190 - hypothetical protein 2252 49.04 0 2599282..2599542 - 86 117624566 - APECO1_4189 - hypothetical protein 2253 48.89 0 2599892..2600206 - 104 117624567 - APECO1_4188 - hypothetical protein 2254 52.65 0 2600601..2601977 - 458 117624568 - APECO1_4187 - putative replicative DNA helicase 2255 49.68 0 2601974..2602921 - 315 117624569 - APECO1_4186 - putative phage replication protein 2256 43.96 -1 2602924..2603196 - 90 117624570 - APECO1_4185 - hypothetical protein 2257 46.46 0 2603219..2603599 - 126 117624571 - APECO1_4184 - hypothetical protein 2258 47.00 0 2603887..2604537 + 216 117624572 - APECO1_4183 - putative phage repressor protein 2259 50.17 0 2604659..2604955 - 98 117624573 - APECO1_4182 - hypothetical protein 2260 48.67 0 2605060..2605359 + 99 117624574 - APECO1_4180 - putative transcription antitermination protein 2261 36.73 -2 2605368..2605838 + 156 117624575 - APECO1_4179 - hypothetical protein 2262 45.54 -1 2606460..2607065 + 201 117624576 - APECO1_4178 - hypothetical protein 2263 43.49 -1 2607065..2607448 + 127 117624577 - APECO1_4177 - hypothetical protein 2264 49.16 0 2607472..2607768 + 98 117624578 - APECO1_4176 - hypothetical protein 2265 44.54 -1 2607817..2608503 - 228 117624579 - APECO1_4175 - hypothetical protein 2266 50.09 0 2608679..2609251 + 190 117624580 - APECO1_4174 - hypothetical protein 2267 45.54 -1 2609618..2609953 - 111 117624581 - APECO1_4173 - hypothetical protein 2268 47.86 0 2610499..2611434 - 311 117624582 dsdC APECO1_4172 - DNA-binding transcriptional regulator DsdC 2269 49.25 0 2611652..2612989 + 445 117624583 dsdX APECO1_4171 - permease DsdX 2270 51.09 0 2613007..2614335 + 442 117624584 dsdA APECO1_4170 - D-serine dehydratase 2271 41.91 -1 2614443..2615981 - 512 117624585 emrY APECO1_4169 - multidrug resistance protein Y 2272 42.23 -1 2615981..2617036 - 351 117624586 emrK APECO1_4168 - EmrKY-TolC multidrug resistance efflux pump, membrane fusion protein 2273 39.84 -2 2617560..2618174 + 204 117624587 evgA APECO1_4167 - DNA-binding transcriptional activator EvgA 2274 40.93 -2 2618179..2621772 + 1197 117624588 evgS APECO1_4166 - hybrid sensory histidine kinase in two-component regulatory system with EvgA 2275 45.46 -1 2621828..2622973 - 381 117624589 yfdE APECO1_4165 - hypothetical protein 2276 45.08 -1 2623047..2623991 - 314 117624590 yfdV APECO1_4164 - putative transporter YfdV 2277 47.14 0 2624061..2625755 - 564 117624591 - APECO1_4163 - putative oxalyl-CoA decarboxylase 2278 47.40 0 2625809..2627059 - 416 117624592 yfdW APECO1_4162 - formyl-coenzyme A transferase 2279 46.23 0 2627571..2628206 - 211 117624593 yfdX APECO1_4161 - hypothetical protein 2280 39.13 -2 2628502..2628777 + 91 117624594 ypdI APECO1_4160 - putative lipoprotein involved in colanic acid biosynthesis 2281 51.57 0 2629449..2630369 + 306 117624595 ddg APECO1_4159 - lipid A biosynthesis palmitoleoyl acyltransferase 2282 55.53 0 2630861..2632099 - 412 117624596 - APECO1_4158 - aminotransferase 2283 51.07 0 2632494..2634173 + 559 117624597 ypdA APECO1_4157 - YpdA, sensory kinase in two-component system with YpdB 2284 47.96 0 2634263..2634925 + 220 117624598 ypdB APECO1_4156 - YpdB, response regulator in two-component system with YpdA 2285 52.68 0 2634938..2635795 + 285 117624599 ypdC APECO1_4155 - putative DNA-binding protein 2286 54.57 0 2635798..2638293 - 831 117624600 ypdD APECO1_4154 - putative phosphoenolpyruvate-protein phosphotransferase YpdD 2287 56.94 +1 2638318..2639355 - 345 117624601 ypdE APECO1_4153 - exoaminopeptidase 2288 57.18 +1 2639355..2640440 - 361 117624602 ypdF APECO1_4152 - aminopeptidase 2289 53.45 0 2640456..2641703 - 415 117624603 ypdG APECO1_4151 - putative enzyme IIC component of PTS 2290 50.46 0 2641725..2642051 - 108 117624604 ypdH APECO1_4150 - putative PTS system IIB component YpdH 2291 50.83 0 2642270..2643235 - 321 117624605 glk APECO1_4149 - glucokinase 2292 53.78 0 2643439..2644695 + 418 117624606 yfeO APECO1_4148 - hypothetical protein 2293 53.21 0 2644810..2645136 + 108 117624607 ypeC APECO1_4147 - hypothetical protein 2294 53.03 0 2645277..2646515 - 412 117624608 mntH APECO1_4146 - manganese transport protein MntH 2295 50.46 0 2646851..2648053 + 400 117624609 nupC APECO1_4145 - putative permease of transport system for 3 nucleosides 2296 47.78 0 2648103..2650352 - 749 117624610 yfdA APECO1_4144 - outer membrane protein 2297 50.28 0 2650910..2651269 + 119 117624611 yfdC APECO1_4143 - outer membrane protein 2298 46.31 0 2651271..2651663 + 130 117624612 yfeD APECO1_4142 - putative DNA-binding transcriptional regulator 2299 52.61 0 2651714..2653129 - 471 117624613 gltX APECO1_4141 - glutamyl-tRNA synthetase 2300 51.00 0 2653896..2654795 - 299 117624614 xapR APECO1_4140 - DNA-binding transcriptional activator XapR 2301 48.37 0 2655032..2656288 - 418 117624615 xapB APECO1_4139 - xanthosine transporter 2302 52.16 0 2656349..2657182 - 277 117624616 xapA APECO1_4138 - purine nucleoside phosphorylase 2303 44.84 -1 2657431..2658195 + 254 117624617 yfeN APECO1_4137 - hypothetical protein 2304 51.75 0 2659250..2660248 + 332 117624618 yfeH APECO1_4136 - putative cytochrome oxidase 2305 54.32 0 2660465..2662480 - 671 117624619 ligA APECO1_4135 - NAD-dependent DNA ligase LigA 2306 55.06 0 2662551..2663549 - 332 117624620 zipA APECO1_4134 - cell division protein ZipA 2307 50.00 0 2663779..2664540 + 253 117624621 cysZ APECO1_4132 - putative sulfate transport protein CysZ 2308 49.59 0 2664725..2665696 + 323 117624622 cysK APECO1_4131 - cysteine synthase A 2309 49.32 0 2666014..2666307 - 97 117624623 - APECO1_4130 - hypothetical protein 2310 49.71 0 2666382..2668109 + 575 117624624 ptsI APECO1_4129 - phosphoenolpyruvate-protein phosphotransferase 2311 47.45 0 2668150..2668659 + 169 117624625 crr APECO1_4128 - glucose-specific PTS system component 2312 51.88 0 2668702..2669553 - 283 117624626 pdxK APECO1_4127 - pyridoxal kinase 2313 49.85 0 2669694..2670026 + 110 117624627 yfeK APECO1_4126 - hypothetical protein 2314 56.88 +1 2670029..2670886 - 285 117624628 cysM APECO1_4125 - cysteine synthase B 2315 58.01 +1 2671075..2672172 - 365 117624629 cysA APECO1_4124 - sulfate/thiosulfate transporter subunit 2316 56.51 +1 2672162..2673037 - 291 117624630 cysW APECO1_4123 - sulfate/thiosulfate transporter permease subunit 2317 56.47 +1 2673037..2673870 - 277 117624631 cysT APECO1_4122 - sulfate/thiosulfate transporter subunit 2318 53.20 0 2673870..2674886 - 338 117624632 cysP APECO1_4121 - thiosulfate transporter subunit 2319 55.18 0 2675044..2675835 - 263 117624633 ucpA APECO1_4120 - short chain dehydrogenase 2320 53.51 0 2676115..2677011 + 298 117624634 murQ APECO1_4119 - N-acetylmuramic acid-6-phosphate etherase 2321 56.63 +1 2677015..2678439 + 474 117624635 murP APECO1_4118 - N-acetylmuramic acid phosphotransfer permease 2322 50.35 0 2679612..2680187 - 191 117624637 yfdY APECO1_4116 - hypothetical protein 2323 51.33 0 2680248..2680697 - 149 117624638 yfeZ APECO1_4115 - hypothetical protein 2324 51.88 0 2680684..2681109 - 141 117624639 ypeA APECO1_4114 - putative acetyltransferase 2325 51.26 0 2681323..2682192 + 289 117624640 amiA APECO1_4113 - N-acetylmuramoyl-l-alanine amidase I 2326 54.78 0 2682196..2683095 + 299 117624641 hemF APECO1_4112 - coproporphyrinogen III oxidase 2327 52.61 0 2683101..2684153 - 350 117624642 yfeG APECO1_4111 - transcriptional regulator EutR 2328 57.88 +1 2684199..2684699 - 166 117624643 eutK APECO1_4110 - ethanolamine utilization protein EutK 2329 55.91 +1 2684712..2685371 - 219 117624644 eutL APECO1_4109 - ethanolamine utilization protein EutL 2330 56.87 +1 2685381..2686268 - 295 117624645 eutC APECO1_4108 - ethanolamine ammonia-lyase small subunit 2331 55.73 +1 2686289..2687650 - 453 117624646 eutB APECO1_4107 - putative regulatory subunit of ethanolamine ammonia-lyase 2332 59.33 +1 2687662..2689065 - 467 117624647 eutA APECO1_4106 - reactivating factor for ethanolamine ammonia lyase 50.94 MEAN 4.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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