version 1.0
Escherichia coli APEC O1, complete genome - 1..5082025 4428 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 176 51.35 0 214455..216596 + 713 117622471 ldcC APECO1_1801 - lysine decarboxylase, constitutive 177 50.84 0 216626..217042 + 138 117622472 yaeR APECO1_1800 - hypothetical protein 178 57.20 +1 217107..218405 + 432 117622473 tilS APECO1_1799 - tRNA(Ile)-lysidine synthetase 179 47.89 0 218453..218713 - 86 117622474 rof APECO1_1798 - Rho-binding antiterminator 180 52.20 0 219066..219611 + 181 117622475 yaeQ APECO1_1797 - hypothetical protein 181 55.08 0 219608..220030 + 140 117622476 yaeJ APECO1_1796 - hypothetical protein 182 52.04 0 220044..220754 + 236 117622477 cutF APECO1_1795 - lipoprotein involved with copper homeostasis and adhesion 183 47.52 0 220910..221734 - 274 117622478 yaeF APECO1_1794 - hypothetical protein 184 53.98 0 221787..223505 - 572 117622479 proS APECO1_1793 - prolyl-tRNA synthetase 185 54.24 0 223616..224323 - 235 117622480 yaeB APECO1_1792 - hypothetical protein 186 53.58 0 224320..224724 - 134 117622481 rcsF APECO1_1791 - outer membrane lipoprotein 187 49.02 0 224842..225657 - 271 117622482 metQ APECO1_1790 - DL-methionine transporter substrate-binding subunit 188 51.53 0 225697..226350 - 217 117622483 metI APECO1_1789 - DL-methionine transporter permease subunit 189 52.42 0 226343..227374 - 343 117622484 metN APECO1_1788 - DL-methionine transporter ATP-binding subunit 190 50.26 0 227562..228134 + 190 117622485 yaeD APECO1_1787 - D,D-heptose 1,7-bisphosphate phosphatase 191 46.27 0 233893..234696 + 267 117622489 dkgB APECO1_1783 - 2,5-diketo-D-gluconate reductase B 192 49.07 0 234693..235607 - 304 117622490 - APECO1_1782 - putative transcriptional regulator LYSR-type 193 51.76 0 235824..236648 + 274 117622491 yafD APECO1_1781 - hypothetical protein 194 49.16 0 236726..237496 + 256 117622492 yafE APECO1_1780 - hypothetical protein 195 52.39 0 237543..238901 - 452 117622493 mltD APECO1_1779 - membrane-bound lytic murein transglycosylase D 196 39.81 -2 238973..239728 - 251 117622494 gloB APECO1_1778 - hydroxyacylglutathione hydrolase 197 49.80 0 239744..240484 + 246 117622495 yafS APECO1_1777 - putative S-adenosyl-L-methionine-dependent methyltransferase 198 48.36 0 240481..241059 - 192 117622496 rnhA APECO1_1776 - ribonuclease H 199 51.28 0 241004..241744 + 246 117622497 dnaQ APECO1_1775 - DNA polymerase III subunit epsilon 200 39.44 -2 242282..243067 + 261 117622499 yafT APECO1_1773 - putative aminopeptidase 201 50.83 0 243407..243886 - 159 117622500 aec32 APECO1_1772 - hypothetical protein 202 55.80 +1 243904..245403 - 499 117622501 aec31 APECO1_1771 - hypothetical protein 203 57.54 +1 245273..248800 - 1175 117622502 aec30 APECO1_1770 - hypothetical protein 204 57.03 +1 248820..250262 - 480 117622503 aec29 APECO1_1769 - hypothetical protein 205 61.83 +2 250267..251010 - 247 117622504 aec28 APECO1_1768 - hypothetical protein 206 58.77 +1 251007..253766 - 919 117622505 aec27 APECO1_1767 - putative ATPase with chaperone activity 207 52.68 0 253776..254540 - 254 117622506 aec26 APECO1_1766 - hypothetical protein 208 57.76 +1 254545..255891 - 448 117622507 aec25 APECO1_1765 - hypothetical protein 209 52.76 0 255894..256418 - 174 117622508 aec24 APECO1_1764 - hypothetical protein 210 59.32 +1 256415..257707 - 430 117622509 aec23 APECO1_1763 - hypothetical protein 211 56.57 +1 257712..258761 - 349 117622510 aec22 APECO1_1762 - hypothetical protein 212 54.35 0 258725..260575 - 616 117622511 - APECO1_1761 - hypothetical protein 213 48.12 0 260572..260997 - 141 117622512 aec19 APECO1_1760 - hypothetical protein 214 53.13 0 261002..262486 - 494 117622513 aec18 APECO1_1759 - hypothetical protein 215 48.41 0 262509..263012 - 167 117622514 aec17 APECO1_1758 - hypothetical protein 216 54.53 0 263718..264236 + 172 117622515 aec16 APECO1_1757 - hypothetical protein 217 55.47 0 264457..266439 + 660 117622516 aec15 APECO1_1756 - hypothetical protein 218 36.96 -2 266546..267592 + 348 117622517 aec14 APECO1_1755 - hypothetical protein 219 39.03 -2 267585..269024 + 479 117622518 - APECO1_1753 - hypothetical protein 220 30.58 -2 268999..269289 + 96 117622519 aec11 APECO1_1752 - hypothetical protein 221 40.33 -2 269826..270311 + 161 117622520 yhhI APECO1_1751 - putative transposase 222 34.72 -2 270540..271043 + 167 117622521 aec8 APECO1_1750 - hypothetical protein 223 38.01 -2 271113..271625 + 170 117622522 aec7 APECO1_1749 - hypothetical protein 224 54.86 0 271896..272666 - 256 117622523 yafV APECO1_1748 - hypothetical protein 225 50.84 0 272820..273293 + 157 117622524 ivy APECO1_1747 - vertebrate C-lysozyme inhibitor 226 56.07 +1 273336..275780 - 814 162317586 fadE APECO1_1746 - acyl-CoA dehydrogenase 227 48.58 0 275858..276598 + 246 117622526 gmhA APECO1_1745 - phosphoheptose isomerase 228 52.86 0 276804..277571 + 255 117622527 yafJ APECO1_1744 - putative amidotransferase 229 48.99 0 277542..278282 - 246 117622528 yafK APECO1_1743 - hypothetical protein 230 52.17 0 278585..279343 + 252 117622529 yafL APECO1_1742 - putative lipoprotein 231 41.57 -1 279519..280016 + 165 117622530 yafM APECO1_1741 - hypothetical protein 232 56.78 +1 280336..282075 - 579 117622531 fhiA APECO1_1740 - FhiA protein 233 52.42 0 282020..282805 + 261 117622532 mbhA APECO1_1739 - hypothetical protein 234 53.88 0 282876..283931 + 351 117622533 dinB APECO1_1738 - DNA polymerase IV 235 41.50 -1 283983..284276 + 97 117622534 yafN APECO1_1737 - putative antitoxin of the YafO-YafN toxin-antitoxin system 236 43.61 -1 284279..284677 + 132 117622535 - APECO1_1736 - putative toxin YafO 237 43.93 -1 284687..285139 + 150 117622536 yafP APECO1_1735 - hypothetical protein 238 53.12 0 285317..286468 + 383 117622537 - APECO1_1734 - hypothetical protein 239 54.22 0 286381..287079 + 232 117622538 prfH APECO1_1733 - peptide chain release factor-like protein 240 51.03 0 287136..288593 - 485 117622539 pepD APECO1_1732 - aminoacyl-histidine dipeptidase 241 51.20 0 288854..289312 + 152 117622540 gpt APECO1_1731 - xanthine-guanine phosphoribosyltransferase 242 53.17 0 289404..290648 + 414 117622541 frsA APECO1_1730 - fermentation/respiration switch protein 243 50.25 0 290706..291107 + 133 117622542 crl APECO1_1729 - DNA-binding transcriptional regulator Crl 244 44.82 -1 291217..292278 - 353 117622543 phoE APECO1_1728 - outer membrane phosphoporin protein E 245 55.16 0 292561..293664 + 367 117622544 proB APECO1_1727 - gamma-glutamyl kinase 246 54.94 0 293676..294929 + 417 117622545 proA APECO1_1726 - gamma-glutamyl phosphate reductase 247 46.35 0 295178..295492 - 104 117622546 - APECO1_1725 - hypothetical protein 248 40.10 -2 296225..296608 + 127 117622547 - APECO1_1724 - hypothetical protein 249 35.65 -2 299152..299841 + 229 117622548 - APECO1_1723 - hypothetical protein 250 34.41 -2 299853..300131 + 92 117622549 - APECO1_1722 - hypothetical protein 251 37.04 -2 300264..300668 + 134 117622550 - APECO1_1721 - hypothetical protein 252 40.83 -2 300646..301005 + 119 117622551 - APECO1_1720 - hypothetical protein 253 40.22 -2 301550..301912 + 120 117622552 - APECO1_1719 - hypothetical protein 254 44.51 -1 301931..302959 + 342 117622553 - APECO1_1718 - hypothetical protein 255 40.60 -2 303266..305095 + 609 117622554 - APECO1_1717 - hypothetical protein 256 38.94 -2 305130..305843 + 237 117622555 - APECO1_1716 - hypothetical protein 257 44.19 -1 305925..307259 - 444 117622556 - APECO1_1715 - integrase 258 40.97 -2 307569..307961 - 130 117622557 - APECO1_1714 - integrase 259 30.48 -2 308292..308816 - 174 117622558 - APECO1_1713 - hypothetical protein 260 48.37 0 308942..313072 - 1376 117622559 vat APECO1_1712 - vacuolating autotransporter 261 51.81 0 314071..314346 - 91 117622560 - APECO1_1711 - hypothetical protein 262 43.90 -1 315182..315796 + 204 117622561 yagU APECO1_1710 - hypothetical protein 263 48.79 0 316045..316374 - 109 117622562 ykgJ APECO1_1709 - putative ferredoxin 264 52.91 0 316681..317436 - 251 117622563 yagV APECO1_1708 - hypothetical protein 265 51.64 0 317360..319003 - 547 117622564 yagW APECO1_1707 - hypothetical protein 266 55.11 0 318993..321518 - 841 117622565 yagX APECO1_1706 - hypothetical protein 267 55.09 0 321544..322260 - 238 117622566 yagY APECO1_1705 - hypothetical protein 268 52.38 0 322269..322856 - 195 117622567 matB APECO1_1704 - hypothetical protein 269 39.76 -2 322930..323520 - 196 117622568 ykgK APECO1_1703 - hypothetical protein 270 47.08 0 323944..324234 + 96 117622569 - APECO1_1702 - hypothetical protein 271 46.07 -1 324696..324962 - 88 117622570 rpmE2 APECO1_1701 - 50S ribosomal protein L31 type B 272 44.18 -1 325899..327041 - 380 117622571 - APECO1_1700 - putative NADH-dependent flavin oxidoreductase 273 45.49 -1 327213..328133 - 306 117622572 ycjY APECO1_1699 - hypothetical protein 274 42.53 -1 328227..329216 + 329 117622573 - APECO1_1698 - putative LysR-like transcriptional regulator 275 50.26 0 329341..330309 + 322 117622574 ycjZ APECO1_1697 - putative transcriptional regulator 50.94 MEAN 4.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0