version 1.0
Escherichia coli APEC O1, complete genome - 1..5082025 4428 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1950 59.97 +1 2229260..2229841 - 193 117624262 dcd APECO1_1156 - deoxycytidine triphosphate deaminase 1951 48.13 0 2229933..2230574 - 213 117624263 udk APECO1_1157 - uridine kinase 1952 52.32 0 2230892..2234209 + 1105 117624264 yegE APECO1_1158 - putative sensor protein 1953 55.01 0 2234320..2235168 - 282 117624265 alkA APECO1_1159 - 3-methyl-adenine DNA glycosylase II 1954 55.73 +1 2235302..2236654 + 450 117624266 yegD APECO1_1160 - putative chaperone 1955 51.44 0 2236667..2238616 - 649 117624267 yedI APECO1_1161 - hypothetical protein 1956 51.18 0 2238604..2239365 - 253 117624268 yedK APECO1_1162 - hypothetical protein 1957 53.03 0 2239362..2240021 - 219 117624269 yedL APECO1_1163 - hypothetical protein 1958 53.41 0 2240755..2242149 + 464 117624270 yegM APECO1_1164 - multidrug efflux system subunit MdtA 1959 56.87 +1 2242149..2245271 + 1040 117624271 yegN APECO1_1165 - multidrug efflux system subunit MdtB 1960 56.24 +1 2245272..2248349 + 1025 117624272 yegO APECO1_1166 - multidrug efflux system subunit MdtC 1961 56.00 +1 2248350..2249765 + 471 117624273 yegB APECO1_1167 - multidrug efflux system protein MdtE 1962 53.13 0 2249762..2251165 + 467 117624274 baeS APECO1_1168 - signal transduction histidine-protein kinase BaeS 1963 54.08 0 2251162..2251884 + 240 117624275 - APECO1_1169 - DNA-binding transcriptional regulator BaeR 1964 46.77 0 2252025..2252396 + 123 117624276 yegP APECO1_1170 - hypothetical protein 1965 45.04 -1 2252521..2253135 - 204 117624277 - APECO1_1171 - hypothetical protein 1966 43.04 -1 2253187..2253495 - 102 117624278 - APECO1_1172 - hypothetical protein 1967 40.16 -2 2253621..2255333 - 570 117624279 - APECO1_1173 - hypothetical protein 1968 40.73 -2 2255305..2256021 - 238 117624280 - APECO1_1174 - hypothetical protein 1969 37.78 -2 2256021..2257235 - 404 117624281 - APECO1_1175 - hypothetical protein 1970 54.33 0 2257723..2259084 + 453 117624282 yegQ APECO1_1176 - hypothetical protein 1971 54.98 0 2259657..2260820 - 387 117624283 - APECO1_1177 - phage protein D 1972 53.75 0 2260820..2261299 - 159 117624284 - APECO1_1178 - phage protein U 1973 56.17 +1 2261314..2263761 - 815 117624285 - APECO1_1179 - phage related tail protein 1974 57.19 +1 2270959..2272731 + 590 117624286 gpP APECO1_1180 - Phage protein P 1975 53.24 0 2272731..2273765 + 344 117624287 gpQ APECO1_1181 - Phage protein Q 1976 38.10 -2 2274092..2275141 + 349 117624288 - APECO1_1182 - hypothetical protein 1977 37.62 -2 2275134..2276417 + 427 117624289 - APECO1_1183 - hypothetical protein 1978 53.06 0 2276593..2278848 - 751 117624290 gpA APECO1_1184 - Phage protein A 1979 37.67 -2 2279337..2279636 - 99 117624291 - APECO1_1185 - hypothetical protein 1980 44.58 -1 2279924..2280430 - 168 117624292 gpB APECO1_1186 - Phage protein B 1981 46.67 0 2280992..2281291 + 99 117624293 gpC APECO1_4459 - immunity repressor 1982 44.58 -1 2281407..2282420 + 337 117624294 - APECO1_4458 - putative phage integrase 1983 37.83 -2 2282855..2283232 - 125 117624295 yegR APECO1_4457 - hypothetical protein 1984 49.22 0 2283588..2284487 + 299 117624296 - APECO1_4456 - lipid kinase 1985 46.67 0 2284569..2285348 - 259 117624297 gatR APECO1_4455 - galactitol utilization operon repressor 1986 48.90 0 2285448..2286488 - 346 117624298 gatD APECO1_4454 - galactitol-1-phosphate dehydrogenase 1987 51.03 0 2286536..2287891 - 451 117624299 gatC APECO1_4453 - galactitol-specific enzyme IIC component of PTS 1988 43.16 -1 2287895..2288179 - 94 117624300 gatB APECO1_4452 - galactitol-specific PTS system component IIB 1989 42.60 -1 2288210..2288662 - 150 117624301 gatA APECO1_4451 - galactitol-specific PTS system component IIA 1990 48.38 0 2288672..2289934 - 420 117624302 gatZ APECO1_4450 - putative tagatose 6-phosphate kinase GatZ 1991 53.10 0 2289963..2290817 - 284 117624303 gatY APECO1_4449 - tagatose-bisphosphate aldolase 1992 51.91 0 2291046..2292170 - 374 117624304 - APECO1_4448 - fructose-bisphosphate aldolase 1993 50.63 0 2292355..2293632 + 425 117624305 yegT APECO1_4447 - putative nucleoside transporter 1994 55.02 0 2293629..2294633 + 334 117624306 yegW APECO1_4446 - putative hydrolase 1995 56.42 +1 2294630..2295595 + 321 117624307 yegV APECO1_4445 - putative sugar kinase 1996 51.94 0 2295569..2296315 - 248 117624308 yegW APECO1_4444 - putative transcriptional regulator 1997 47.34 0 2296367..2297194 - 275 117624309 yegX APECO1_4443 - hypothetical protein 1998 54.68 0 2297250..2298050 - 266 117624310 thiD APECO1_4442 - phosphomethylpyrimidine kinase 1999 55.01 0 2298047..2298835 - 262 117624311 thiM APECO1_4441 - hydroxyethylthiazole kinase 2000 51.76 0 2299451..2300275 + 274 117624312 yohL APECO1_4440 - nickel/cobalt efflux protein RcnA 2001 46.24 0 2300314..2300832 + 172 117624313 yohN APECO1_4439 - hypothetical protein 2002 38.45 -2 2300914..2301948 - 344 117624314 yehA APECO1_4438 - fimbrial-like adhesin protein 2003 45.14 -1 2301964..2304444 - 826 117624315 yehB APECO1_4437 - putative outer membrane usher protein YehB precursor 2004 38.96 -2 2304460..2305134 - 224 117624316 yehC APECO1_4436 - putative fimbrial chaperone YehC precursor 2005 42.55 -1 2306051..2306332 - 93 117624317 yehD APECO1_4435 - putative fimbrial-like adhesin protein 2006 53.33 0 2306595..2307734 - 379 117624318 mrp APECO1_4434 - putative ATPase 2007 52.42 0 2307827..2309869 + 680 117624319 metG APECO1_4433 - methionyl-tRNA synthetase 2008 50.38 0 2310010..2313798 + 1262 117624320 - APECO1_4432 - hypothetical protein 2009 50.57 0 2314086..2317439 + 1117 117624321 yehI APECO1_4431 - hypothetical protein 2010 53.07 0 2318530..2319684 + 384 117624322 yehL APECO1_4430 - putative ATPase 2011 54.94 0 2319691..2321967 + 758 117624323 yehM APECO1_4429 - hypothetical protein 2012 54.27 0 2321750..2323096 + 448 117624324 yehN APECO1_4428 - hypothetical protein 2013 54.39 0 2323093..2325096 + 667 117624325 yehQ APECO1_4427 - hypothetical protein 2014 41.77 -1 2325209..2325682 + 157 117624326 yehR APECO1_4426 - hypothetical protein 2015 49.04 0 2325723..2326193 - 156 117624327 yehS APECO1_4425 - hypothetical protein 2016 50.20 0 2326240..2326974 - 244 117624328 yehT APECO1_4424 - putative two-component response-regulatory protein YehT 2017 50.95 0 2326956..2328641 - 561 117624329 yehU APECO1_4423 - putative sensory kinase in two-component system with YehT 2018 52.87 0 2328863..2329594 + 243 117624330 yehV APECO1_4422 - MerR-like regulator A 2019 57.24 +1 2329742..2330473 - 243 117624331 yehW APECO1_4421 - transporter subunit membrane protein 2020 55.77 +1 2330478..2331404 - 308 117624332 yehX APECO1_4420 - transporter subunit ATP-binding protein 2021 57.08 +1 2331397..2332554 - 385 117624333 yehY APECO1_4419 - transporter subunit membrane protein 2022 53.70 0 2332561..2333478 - 305 117624334 yehZ APECO1_4418 - transporter subunit periplasmic-binding protein 2023 53.76 0 2333668..2336037 - 789 117624335 bglX APECO1_4417 - beta-D-glucoside glucohydrolase-like protein 2024 51.61 0 2336170..2337876 + 568 117624336 dld APECO1_4416 - D-lactate dehydrogenase 2025 50.74 0 2337915..2338856 - 313 117624337 pbpG APECO1_4415 - D-alanyl-D-alanine endopeptidase 2026 53.92 0 2339021..2339632 - 203 117624338 yohC APECO1_4414 - hypothetical protein 2027 54.15 0 2339742..2340356 + 204 117624339 yohD APECO1_4413 - hypothetical protein 2028 55.12 0 2340476..2341237 - 253 117624340 yohF APECO1_4412 - acetoin dehydrogenase 2029 54.28 0 2341290..2342807 - 505 117624341 yohG APECO1_4411 - multidrug resistance outer membrane protein MdtQ 2030 53.31 0 2343421..2344371 - 316 117624342 dusC APECO1_4410 - tRNA-dihydrouridine synthase C 2031 49.37 0 2344610..2345008 + 132 117624343 yohJ APECO1_4409 - hypothetical protein 2032 53.30 0 2345005..2345700 + 231 117624344 yohK APECO1_4408 - hypothetical protein 2033 54.92 0 2345830..2346714 + 294 117624345 cdd APECO1_4407 - cytidine deaminase 2034 48.47 0 2346864..2347583 + 239 117624346 sanA APECO1_4406 - hypothetical protein 2035 50.85 0 2348019..2349257 + 412 117624347 yeiT APECO1_4405 - putative oxidoreductase 2036 50.16 0 2349251..2350486 + 411 117624348 yeiA APECO1_4404 - dihydropyrimidine dehydrogenase 2037 50.54 0 2350729..2351739 - 336 117624349 mglC APECO1_4403 - beta-methylgalactoside transporter inner membrane component 2038 44.84 -1 2351755..2353275 - 506 117624350 mglA APECO1_4402 - galactose/methyl galaxtoside transporter ATP-binding protein 2039 51.15 0 2353336..2354334 - 332 117624351 mglB APECO1_4401 - methyl-galactoside transporter subunit MglB 2040 51.87 0 2354614..2355654 - 346 117624352 galS APECO1_4400 - DNA-binding transcriptional regulator GalS 2041 53.37 0 2355796..2356953 - 385 117624353 - APECO1_4399 - hypothetical protein 2042 50.82 0 2356970..2357638 - 222 117624354 folE APECO1_4398 - GTP cyclohydrolase I 2043 53.88 0 2357896..2358732 + 278 117624355 yeiG APECO1_4397 - putative esterase 2044 52.53 0 2358764..2360836 - 690 117624356 cirA APECO1_4396 - colicin I receptor 2045 53.20 0 2360961..2362430 - 489 117624357 lysP APECO1_4395 - lysine transporter 2046 53.74 0 2362635..2363516 - 293 117624358 yeiE APECO1_4394 - putative DNA-binding transcriptional regulator 2047 52.33 0 2364738..2365595 + 285 117624359 yeiH APECO1_4393 - endonuclease IV 2048 47.29 0 2365599..2366687 + 362 117624360 yeiI APECO1_4392 - hypothetical protein 2049 51.17 0 2366955..2367896 - 313 117624361 rihB APECO1_43912 - ribonucleoside hydrolase 2 50.94 MEAN 4.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0