version 1.0
Escherichia coli APEC O1, complete genome - 1..5082025 4428 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1911 58.22 +1 2179890..2181203 + 437 117624223 hisD APECO1_1117 - histidinol dehydrogenase 1912 54.72 0 2181200..2182270 + 356 117624224 hisC APECO1_1118 - histidinol-phosphate aminotransferase 1913 53.46 0 2182270..2183337 + 355 117624225 hisB APECO1_1119 - imidazole glycerol-phosphate dehydratase/histidinol phosphatase 1914 55.84 +1 2183337..2183927 + 196 117624226 hisH APECO1_1120 - imidazole glycerol phosphate synthase subunit HisH 1915 56.01 +1 2183924..2184664 + 246 117624227 hisA APECO1_1121 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1916 52.90 0 2184646..2185422 + 258 117624228 hisF APECO1_1122 - imidazole glycerol phosphate synthase subunit HisF 1917 54.41 0 2185416..2186027 + 203 117624229 hisI APECO1_1123 - bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein 1918 45.72 -1 2186123..2187139 - 338 117624230 cld APECO1_1124 - regulator of length of O-antigen component of lipopolysaccharide chains 1919 43.96 -1 2187249..2188415 - 388 117624231 ugd APECO1_1125 - UDP-glucose 6-dehydrogenase 1920 50.60 0 2188663..2190069 - 468 117624232 gnd APECO1_1126 - 6-phosphogluconate dehydrogenase 1921 31.70 -2 2195479..2196705 - 408 117624233 - APECO1_1127 - putative O-antigen transporter 1922 39.16 -2 2196749..2197297 - 182 117624234 rmlC APECO1_1128 - putative dTDP-4-dehydrorhamnose 3,5-epimerase 1923 43.23 -1 2197302..2198180 - 292 117624235 rmlA APECO1_1129 - glucose-1-phosphate thymidylyltransferase 1924 46.33 0 2198238..2199137 - 299 117624236 rmlD APECO1_1130 - dTDP-4-dehydrorhamnose reductase 1925 43.46 -1 2199137..2200222 - 361 117624237 rfbB APECO1_1131 - dTDP-glucose 4,6 dehydratase 1926 52.10 0 2200595..2201500 - 301 117624238 galF APECO1_1132 - UTP--glucose-1-phosphate uridylyltransferase subunit GalF 1927 46.45 0 2201663..2203057 - 464 117624239 wcaM APECO1_1133 - putative colanic acid biosynthesis protein 1928 53.81 0 2203068..2204288 - 406 117624240 wcaL APECO1_1134 - putative colanic acid biosynthesis glycosyl transferase 1929 53.94 0 2204285..2205565 - 426 117624241 wcaK APECO1_1135 - putative pyruvyl transferase 1930 54.23 0 2205727..2207205 - 492 117624242 wzxC APECO1_1136 - colanic acid exporter 1931 54.41 0 2207207..2208601 - 464 117624243 wcaJ APECO1_1137 - putative UDP-glucose lipid carrier transferase 1932 55.43 0 2208656..2210026 - 456 117624244 cpsG APECO1_1138 - phosphomannomutase 1933 55.53 0 2210128..2211564 - 478 117624245 cpsB APECO1_1139 - mannose-1-phosphate guanylyltransferase 1934 54.98 0 2211567..2212790 - 407 117624246 wcaI APECO1_1140 - glycosyl transferase 1935 55.28 0 2212787..2213269 - 160 117624247 wcaH APECO1_1141 - GDP-mannose mannosyl hydrolase 1936 55.59 0 2213269..2214234 - 321 117624248 wcaG APECO1_1142 - GDP-fucose synthetase 1937 54.10 0 2214237..2215358 - 373 117624249 gmd APECO1_1143 - GDP-mannose 4,6-dehydratase 1938 48.45 0 2215385..2215933 - 182 117624250 wcaF APECO1_1144 - putative colanic acid biosynthesis acetyltransferase WcaF 1939 47.66 0 2215949..2216695 - 248 117624251 wcaE APECO1_1145 - glycosyl transferase 1940 42.25 -1 2216776..2218020 - 414 117624252 wcaD APECO1_1146 - putative colanic acid biosynthesis protein 1941 53.53 0 2217971..2219188 - 405 117624253 wcaC APECO1_1147 - glycosyl transferase 1942 54.60 0 2219185..2219673 - 162 117624254 wcaB APECO1_1148 - putative colanic acid biosynthesis acetyltransferase WcaB 1943 51.67 0 2219676..2220515 - 279 117624255 wcaA APECO1_1149 - glycosyl transferase 1944 52.57 0 2220644..2222842 - 732 117624256 wzc APECO1_1150 - tyrosine kinase 1945 54.50 0 2222809..2223252 - 147 117624257 wzb APECO1_1151 - tyrosine phosphatase 1946 53.60 0 2223258..2224397 - 379 117624258 wza APECO1_1152 - putative polysaccharide export protein 1947 52.31 0 2225017..2226639 + 540 117624259 yegH APECO1_1153 - hypothetical protein 1948 41.59 -1 2226714..2227052 + 112 117624260 - APECO1_1154 - hypothetical protein 1949 52.54 0 2227385..2229238 - 617 117624261 asmA APECO1_1155 - putative assembly protein 1950 59.97 +1 2229260..2229841 - 193 117624262 dcd APECO1_1156 - deoxycytidine triphosphate deaminase 1951 48.13 0 2229933..2230574 - 213 117624263 udk APECO1_1157 - uridine kinase 1952 52.32 0 2230892..2234209 + 1105 117624264 yegE APECO1_1158 - putative sensor protein 1953 55.01 0 2234320..2235168 - 282 117624265 alkA APECO1_1159 - 3-methyl-adenine DNA glycosylase II 1954 55.73 +1 2235302..2236654 + 450 117624266 yegD APECO1_1160 - putative chaperone 1955 51.44 0 2236667..2238616 - 649 117624267 yedI APECO1_1161 - hypothetical protein 1956 51.18 0 2238604..2239365 - 253 117624268 yedK APECO1_1162 - hypothetical protein 1957 53.03 0 2239362..2240021 - 219 117624269 yedL APECO1_1163 - hypothetical protein 1958 53.41 0 2240755..2242149 + 464 117624270 yegM APECO1_1164 - multidrug efflux system subunit MdtA 1959 56.87 +1 2242149..2245271 + 1040 117624271 yegN APECO1_1165 - multidrug efflux system subunit MdtB 1960 56.24 +1 2245272..2248349 + 1025 117624272 yegO APECO1_1166 - multidrug efflux system subunit MdtC 1961 56.00 +1 2248350..2249765 + 471 117624273 yegB APECO1_1167 - multidrug efflux system protein MdtE 1962 53.13 0 2249762..2251165 + 467 117624274 baeS APECO1_1168 - signal transduction histidine-protein kinase BaeS 1963 54.08 0 2251162..2251884 + 240 117624275 - APECO1_1169 - DNA-binding transcriptional regulator BaeR 1964 46.77 0 2252025..2252396 + 123 117624276 yegP APECO1_1170 - hypothetical protein 1965 45.04 -1 2252521..2253135 - 204 117624277 - APECO1_1171 - hypothetical protein 1966 43.04 -1 2253187..2253495 - 102 117624278 - APECO1_1172 - hypothetical protein 1967 40.16 -2 2253621..2255333 - 570 117624279 - APECO1_1173 - hypothetical protein 1968 40.73 -2 2255305..2256021 - 238 117624280 - APECO1_1174 - hypothetical protein 1969 37.78 -2 2256021..2257235 - 404 117624281 - APECO1_1175 - hypothetical protein 1970 54.33 0 2257723..2259084 + 453 117624282 yegQ APECO1_1176 - hypothetical protein 1971 54.98 0 2259657..2260820 - 387 117624283 - APECO1_1177 - phage protein D 1972 53.75 0 2260820..2261299 - 159 117624284 - APECO1_1178 - phage protein U 1973 56.17 +1 2261314..2263761 - 815 117624285 - APECO1_1179 - phage related tail protein 1974 57.19 +1 2270959..2272731 + 590 117624286 gpP APECO1_1180 - Phage protein P 1975 53.24 0 2272731..2273765 + 344 117624287 gpQ APECO1_1181 - Phage protein Q 1976 38.10 -2 2274092..2275141 + 349 117624288 - APECO1_1182 - hypothetical protein 1977 37.62 -2 2275134..2276417 + 427 117624289 - APECO1_1183 - hypothetical protein 1978 53.06 0 2276593..2278848 - 751 117624290 gpA APECO1_1184 - Phage protein A 1979 37.67 -2 2279337..2279636 - 99 117624291 - APECO1_1185 - hypothetical protein 1980 44.58 -1 2279924..2280430 - 168 117624292 gpB APECO1_1186 - Phage protein B 1981 46.67 0 2280992..2281291 + 99 117624293 gpC APECO1_4459 - immunity repressor 1982 44.58 -1 2281407..2282420 + 337 117624294 - APECO1_4458 - putative phage integrase 1983 37.83 -2 2282855..2283232 - 125 117624295 yegR APECO1_4457 - hypothetical protein 1984 49.22 0 2283588..2284487 + 299 117624296 - APECO1_4456 - lipid kinase 1985 46.67 0 2284569..2285348 - 259 117624297 gatR APECO1_4455 - galactitol utilization operon repressor 1986 48.90 0 2285448..2286488 - 346 117624298 gatD APECO1_4454 - galactitol-1-phosphate dehydrogenase 1987 51.03 0 2286536..2287891 - 451 117624299 gatC APECO1_4453 - galactitol-specific enzyme IIC component of PTS 1988 43.16 -1 2287895..2288179 - 94 117624300 gatB APECO1_4452 - galactitol-specific PTS system component IIB 1989 42.60 -1 2288210..2288662 - 150 117624301 gatA APECO1_4451 - galactitol-specific PTS system component IIA 1990 48.38 0 2288672..2289934 - 420 117624302 gatZ APECO1_4450 - putative tagatose 6-phosphate kinase GatZ 1991 53.10 0 2289963..2290817 - 284 117624303 gatY APECO1_4449 - tagatose-bisphosphate aldolase 1992 51.91 0 2291046..2292170 - 374 117624304 - APECO1_4448 - fructose-bisphosphate aldolase 1993 50.63 0 2292355..2293632 + 425 117624305 yegT APECO1_4447 - putative nucleoside transporter 1994 55.02 0 2293629..2294633 + 334 117624306 yegW APECO1_4446 - putative hydrolase 1995 56.42 +1 2294630..2295595 + 321 117624307 yegV APECO1_4445 - putative sugar kinase 1996 51.94 0 2295569..2296315 - 248 117624308 yegW APECO1_4444 - putative transcriptional regulator 1997 47.34 0 2296367..2297194 - 275 117624309 yegX APECO1_4443 - hypothetical protein 1998 54.68 0 2297250..2298050 - 266 117624310 thiD APECO1_4442 - phosphomethylpyrimidine kinase 1999 55.01 0 2298047..2298835 - 262 117624311 thiM APECO1_4441 - hydroxyethylthiazole kinase 2000 51.76 0 2299451..2300275 + 274 117624312 yohL APECO1_4440 - nickel/cobalt efflux protein RcnA 2001 46.24 0 2300314..2300832 + 172 117624313 yohN APECO1_4439 - hypothetical protein 2002 38.45 -2 2300914..2301948 - 344 117624314 yehA APECO1_4438 - fimbrial-like adhesin protein 2003 45.14 -1 2301964..2304444 - 826 117624315 yehB APECO1_4437 - putative outer membrane usher protein YehB precursor 2004 38.96 -2 2304460..2305134 - 224 117624316 yehC APECO1_4436 - putative fimbrial chaperone YehC precursor 2005 42.55 -1 2306051..2306332 - 93 117624317 yehD APECO1_4435 - putative fimbrial-like adhesin protein 2006 53.33 0 2306595..2307734 - 379 117624318 mrp APECO1_4434 - putative ATPase 2007 52.42 0 2307827..2309869 + 680 117624319 metG APECO1_4433 - methionyl-tRNA synthetase 2008 50.38 0 2310010..2313798 + 1262 117624320 - APECO1_4432 - hypothetical protein 2009 50.57 0 2314086..2317439 + 1117 117624321 yehI APECO1_4431 - hypothetical protein 2010 53.07 0 2318530..2319684 + 384 117624322 yehL APECO1_4430 - putative ATPase 50.94 MEAN 4.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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