version 1.0
Escherichia coli APEC O1, complete genome - 1..5082025 4428 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1852 60.31 +1 2115444..2116544 + 366 117624164 ybtU APECO1_1060 - yersiniabactin biosynthetic protein 1853 58.71 +1 2116541..2117344 + 267 117624165 ybtT APECO1_1061 - yersiniabactin biosynthetic protein YbtT 1854 58.81 +1 2117348..2118925 + 525 117624166 ybtE APECO1_1062 - yersiniabactin siderophore biosynthetic protein 1855 56.48 +1 2119056..2121077 + 673 117624167 fyuA APECO1_1063 - pesticin/yersiniabactin receptor protein 1856 43.62 -1 2121671..2122477 + 268 117624168 - APECO1_1064 - hypothetical protein 1857 48.70 0 2122610..2124568 + 652 117624169 - APECO1_1065 - putative autotransporter 1858 38.75 -2 2124696..2125748 - 350 117624170 - APECO1_1066 - hypothetical protein 1859 50.49 0 2126063..2127379 + 438 117624171 - APECO1_1067 - shikimate transporter 1860 49.43 0 2127433..2128935 + 500 117624172 amn APECO1_1068 - AMP nucleosidase 1861 39.33 -2 2129278..2129994 + 238 117624173 - APECO1_1069 - hypothetical protein 1862 37.85 -2 2130050..2130337 - 95 117624174 - APECO1_1070 - hypothetical protein 1863 49.30 0 2130624..2132114 - 496 117624175 yeeO APECO1_6020 - hypothetical protein 1864 47.95 0 2132388..2133338 - 316 117624176 cbl APECO1_6021 - transcriptional regulator Cbl 1865 48.80 0 2133440..2134357 - 305 117624177 nac APECO1_6022 - nitrogen assimilation transcriptional regulator 1866 49.89 0 2134815..2135750 - 311 117624178 erfK APECO1_6023 - hypothetical protein 1867 52.31 0 2135812..2136891 - 359 117624179 cobT APECO1_1072 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1868 52.56 0 2136903..2137682 - 259 117624180 cobS APECO1_1073 - cobalamin synthase 1869 50.55 0 2137643..2138188 - 181 117624181 cobU APECO1_1074 - adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 1870 47.94 0 2140861..2141175 - 104 117624182 - APECO1_1075 - hypothetical protein 1871 41.40 -2 2141294..2142508 + 404 117624183 - APECO1_1076 - putative carbohydrate kinase 1872 40.05 -2 2142522..2143280 + 252 117624184 - APECO1_1077 - hypothetical protein 1873 46.79 0 2143337..2144302 + 321 117624185 - APECO1_1078 - hypothetical protein 1874 47.54 0 2144305..2145339 + 344 117624186 - APECO1_1079 - putative phosphotriesterase-related protein 1875 51.42 0 2145991..2146974 - 327 117624187 - APECO1_1080 - putative transposase 1876 49.56 0 2147032..2147370 - 112 117624188 - APECO1_1081 - hypothetical protein 1877 52.32 0 2147654..2148148 - 164 117624189 - APECO1_1082 - hypothetical protein 1878 52.45 0 2148049..2148456 - 135 117624190 - APECO1_1083 - hypothetical protein 1879 56.27 +1 2148710..2149315 - 201 117624191 - APECO1_1084 - hypothetical protein 1880 49.07 0 2150106..2150429 + 107 117624192 - APECO1_1085 - hypothetical protein 1881 55.39 0 2150605..2151012 + 135 117624193 - APECO1_1086 - putative transcriptional regulator 1882 50.49 0 2151091..2151708 + 205 117624194 - APECO1_1087 - hypothetical protein 1883 42.72 -1 2152251..2153102 - 283 117624195 - APECO1_1088 - putative transposase subunit 1884 45.59 -1 2153099..2153620 - 173 117624196 - APECO1_1089 - putative transposase subunit 1885 51.45 0 2154070..2154345 + 91 117624197 - APECO1_1090 - putative transposase subunit 1886 53.33 0 2154572..2154916 - 114 117624198 - APECO1_1091 - hypothetical protein 1887 50.34 0 2155537..2156700 + 387 117624199 - APECO1_1092 - hypothetical protein 1888 58.11 +1 2156745..2157656 + 303 117624200 - APECO1_1093 - hypothetical protein 1889 51.94 0 2157874..2160270 + 798 117624201 - APECO1_1094 - hypothetical protein 1890 54.08 0 2160267..2161172 + 301 117624202 - APECO1_1095 - hypothetical protein 1891 54.53 0 2161169..2162239 + 356 117624203 - APECO1_1097 - putative esterase 1892 44.44 -1 2162267..2163058 + 263 117624204 - APECO1_1098 - hypothetical protein 1893 41.12 -2 2163074..2163484 + 136 117624205 - APECO1_1099 - hypothetical protein 1894 56.67 +1 2163701..2164540 - 279 117624206 - APECO1_1100 - hypothetical protein 1895 56.93 +1 2164631..2165554 - 307 117624207 - APECO1_1101 - hypothetical protein 1896 57.45 +1 2165924..2166292 + 122 117624208 yeeU APECO1_1102 - antitoxin of the YeeV-YeeU toxin-antitoxin system 1897 53.03 0 2166381..2166644 + 87 117624209 yeeV APECO1_1103 - toxin of the YeeV-YeeU toxin-antitoxin system 1898 49.58 0 2167386..2167742 + 118 117624210 yoeF APECO1_1104 - hypothetical protein 1899 46.46 0 2167843..2168238 - 131 117624211 yeeX APECO1_1105 - hypothetical protein 1900 50.71 0 2168344..2169402 - 352 117624212 yeeA APECO1_1106 - hypothetical protein 1901 47.26 0 2169600..2170073 - 157 117624213 sbmC APECO1_1107 - DNA gyrase inhibitor 1902 50.00 0 2170192..2171235 - 347 117624214 dacD APECO1_1108 - D-alanyl-D-alanine carboxypeptidase 1903 49.39 0 2171519..2172994 + 491 117624215 sbcB APECO1_1109 - exonuclease I 1904 50.90 0 2173278..2174336 - 352 117624216 yeeE APECO1_1110 - inner membrane protein 1905 52.97 0 2174515..2175879 - 454 117624217 yeeF APECO1_1111 - amino acid transporter 1906 51.31 0 2176140..2177090 - 316 117624218 yeeY APECO1_1112 - DNA-binding transcriptional regulator 1907 51.03 0 2177115..2177939 - 274 117624219 yeeZ APECO1_1113 - epimerase 1908 42.35 -1 2178022..2178276 - 84 117624220 - APECO1_1114 - hypothetical protein 1909 45.88 -1 2178273..2178551 - 92 117624221 yefM APECO1_1115 - antitoxin YefM 1910 54.67 0 2178994..2179893 + 299 117624222 hisG APECO1_1116 - ATP phosphoribosyltransferase 1911 58.22 +1 2179890..2181203 + 437 117624223 hisD APECO1_1117 - histidinol dehydrogenase 1912 54.72 0 2181200..2182270 + 356 117624224 hisC APECO1_1118 - histidinol-phosphate aminotransferase 1913 53.46 0 2182270..2183337 + 355 117624225 hisB APECO1_1119 - imidazole glycerol-phosphate dehydratase/histidinol phosphatase 1914 55.84 +1 2183337..2183927 + 196 117624226 hisH APECO1_1120 - imidazole glycerol phosphate synthase subunit HisH 1915 56.01 +1 2183924..2184664 + 246 117624227 hisA APECO1_1121 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1916 52.90 0 2184646..2185422 + 258 117624228 hisF APECO1_1122 - imidazole glycerol phosphate synthase subunit HisF 1917 54.41 0 2185416..2186027 + 203 117624229 hisI APECO1_1123 - bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein 1918 45.72 -1 2186123..2187139 - 338 117624230 cld APECO1_1124 - regulator of length of O-antigen component of lipopolysaccharide chains 1919 43.96 -1 2187249..2188415 - 388 117624231 ugd APECO1_1125 - UDP-glucose 6-dehydrogenase 1920 50.60 0 2188663..2190069 - 468 117624232 gnd APECO1_1126 - 6-phosphogluconate dehydrogenase 1921 31.70 -2 2195479..2196705 - 408 117624233 - APECO1_1127 - putative O-antigen transporter 1922 39.16 -2 2196749..2197297 - 182 117624234 rmlC APECO1_1128 - putative dTDP-4-dehydrorhamnose 3,5-epimerase 1923 43.23 -1 2197302..2198180 - 292 117624235 rmlA APECO1_1129 - glucose-1-phosphate thymidylyltransferase 1924 46.33 0 2198238..2199137 - 299 117624236 rmlD APECO1_1130 - dTDP-4-dehydrorhamnose reductase 1925 43.46 -1 2199137..2200222 - 361 117624237 rfbB APECO1_1131 - dTDP-glucose 4,6 dehydratase 1926 52.10 0 2200595..2201500 - 301 117624238 galF APECO1_1132 - UTP--glucose-1-phosphate uridylyltransferase subunit GalF 1927 46.45 0 2201663..2203057 - 464 117624239 wcaM APECO1_1133 - putative colanic acid biosynthesis protein 1928 53.81 0 2203068..2204288 - 406 117624240 wcaL APECO1_1134 - putative colanic acid biosynthesis glycosyl transferase 1929 53.94 0 2204285..2205565 - 426 117624241 wcaK APECO1_1135 - putative pyruvyl transferase 1930 54.23 0 2205727..2207205 - 492 117624242 wzxC APECO1_1136 - colanic acid exporter 1931 54.41 0 2207207..2208601 - 464 117624243 wcaJ APECO1_1137 - putative UDP-glucose lipid carrier transferase 1932 55.43 0 2208656..2210026 - 456 117624244 cpsG APECO1_1138 - phosphomannomutase 1933 55.53 0 2210128..2211564 - 478 117624245 cpsB APECO1_1139 - mannose-1-phosphate guanylyltransferase 1934 54.98 0 2211567..2212790 - 407 117624246 wcaI APECO1_1140 - glycosyl transferase 1935 55.28 0 2212787..2213269 - 160 117624247 wcaH APECO1_1141 - GDP-mannose mannosyl hydrolase 1936 55.59 0 2213269..2214234 - 321 117624248 wcaG APECO1_1142 - GDP-fucose synthetase 1937 54.10 0 2214237..2215358 - 373 117624249 gmd APECO1_1143 - GDP-mannose 4,6-dehydratase 1938 48.45 0 2215385..2215933 - 182 117624250 wcaF APECO1_1144 - putative colanic acid biosynthesis acetyltransferase WcaF 1939 47.66 0 2215949..2216695 - 248 117624251 wcaE APECO1_1145 - glycosyl transferase 1940 42.25 -1 2216776..2218020 - 414 117624252 wcaD APECO1_1146 - putative colanic acid biosynthesis protein 1941 53.53 0 2217971..2219188 - 405 117624253 wcaC APECO1_1147 - glycosyl transferase 1942 54.60 0 2219185..2219673 - 162 117624254 wcaB APECO1_1148 - putative colanic acid biosynthesis acetyltransferase WcaB 1943 51.67 0 2219676..2220515 - 279 117624255 wcaA APECO1_1149 - glycosyl transferase 1944 52.57 0 2220644..2222842 - 732 117624256 wzc APECO1_1150 - tyrosine kinase 1945 54.50 0 2222809..2223252 - 147 117624257 wzb APECO1_1151 - tyrosine phosphatase 1946 53.60 0 2223258..2224397 - 379 117624258 wza APECO1_1152 - putative polysaccharide export protein 1947 52.31 0 2225017..2226639 + 540 117624259 yegH APECO1_1153 - hypothetical protein 1948 41.59 -1 2226714..2227052 + 112 117624260 - APECO1_1154 - hypothetical protein 1949 52.54 0 2227385..2229238 - 617 117624261 asmA APECO1_1155 - putative assembly protein 1950 59.97 +1 2229260..2229841 - 193 117624262 dcd APECO1_1156 - deoxycytidine triphosphate deaminase 1951 48.13 0 2229933..2230574 - 213 117624263 udk APECO1_1157 - uridine kinase 50.94 MEAN 4.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0