version 1.0
Escherichia coli APEC O1, complete genome - 1..5082025 4428 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1815 49.69 0 2066308..2066796 - 162 117624127 - APECO1_1021 - hypothetical protein 1816 51.48 0 2066702..2067919 - 405 117624128 - APECO1_1022 - putative phage capsid protein 1817 51.33 0 2067934..2068533 - 199 117624129 - APECO1_1023 - putative phage capsid protease 1818 50.37 0 2068526..2069752 - 408 117624130 - APECO1_1024 - putative phage portal protein 1819 51.14 0 2069900..2071657 - 585 117624131 - APECO1_1025 - putative phage terminase 1820 53.21 0 2071657..2072139 - 160 117624132 - APECO1_1026 - putative phage terminase 1821 54.42 0 2072287..2072637 - 116 117624133 hnhC APECO1_1027 - HnhC 1822 54.49 0 2072680..2073147 - 155 117624134 - APECO1_1028 - putative endopeptidase 1823 52.25 0 2073144..2073677 - 177 117624135 - APECO1_1029 - putative phage lysozyme 1824 47.29 0 2073741..2074091 - 116 117624136 ydfR APECO1_1030 - hypothetical protein 1825 41.74 -1 2075039..2075752 - 237 117624137 - APECO1_1031 - putative inner membrane protein 1826 46.26 0 2075982..2076677 - 231 117624138 - APECO1_1032 - putative Q antiterminator encoded by prophage CP-933P 1827 52.73 0 2076668..2077033 - 121 117624139 - APECO1_1033 - Holliday junction resolvase 1828 53.41 0 2077034..2078089 - 351 117624140 - APECO1_1034 - hypothetical protein 1829 47.29 0 2079275..2079790 - 171 117624141 - APECO1_1035 - hypothetical protein 1830 44.36 -1 2080232..2080621 - 129 117624142 - APECO1_1036 - hypothetical protein 1831 49.04 0 2080590..2080901 - 103 117624143 - APECO1_1037 - hypothetical protein 1832 47.79 0 2080917..2081324 - 135 117624144 - APECO1_1038 - hypothetical protein 1833 54.04 0 2081365..2082441 - 358 117624145 - APECO1_1040 - hypothetical protein 1834 51.64 0 2082507..2082932 - 141 117624146 - APECO1_1041 - hypothetical protein 1835 39.45 -2 2082929..2083255 - 108 117624147 - APECO1_1042 - putative regulatory protein 1836 40.71 -2 2083263..2083682 + 139 117624148 - APECO1_1043 - putative transcriptional regulator 1837 46.22 0 2083983..2084339 + 118 117624149 - APECO1_1044 - hypothetical protein 1838 53.74 0 2084633..2084926 - 97 117624150 - APECO1_1045 - hypothetical protein 1839 41.74 -1 2085001..2085333 - 110 117624151 - APECO1_1046 - hypothetical protein 1840 43.80 -1 2085328..2085585 + 85 117624152 - APECO1_1047 - hypothetical protein 1841 49.19 0 2085665..2088136 + 823 117624153 - APECO1_1048 - hypothetical protein 1842 42.40 -1 2088398..2089423 + 341 117624154 - APECO1_1049 - putative phage integrase 1843 45.64 -1 2089620..2090456 + 278 117624155 - APECO1_1050 - hypothetical protein 1844 53.58 0 2091013..2091975 + 320 117624156 - APECO1_1051 - putative phage integrase 1845 55.17 0 2092250..2093554 - 434 117624157 - APECO1_1052 - salicylate synthase Irp9 1846 59.68 +1 2093582..2094970 - 462 117624158 ybtX APECO1_1054 - hypothetical protein 1847 58.31 +1 2094855..2096684 - 609 117624159 - APECO1_1055 - putative ABC transporter protein 1848 57.18 +1 2096644..2098446 - 600 117624160 ybtP APECO1_1056 - putative inner membrane ABC-transporter 1849 56.56 +1 2098613..2099572 + 319 117624161 - APECO1_1057 - putative AraC type regulator 1850 60.07 +1 2099745..2105870 + 2041 117624162 irp2 APECO1_1058 - yersiniabactin biosynthetic protein 1851 60.67 +2 2105958..2115119 + 3053 117624163 irp1 APECO1_1059 - yersiniabactin biosynthetic protein 1852 60.31 +1 2115444..2116544 + 366 117624164 ybtU APECO1_1060 - yersiniabactin biosynthetic protein 1853 58.71 +1 2116541..2117344 + 267 117624165 ybtT APECO1_1061 - yersiniabactin biosynthetic protein YbtT 1854 58.81 +1 2117348..2118925 + 525 117624166 ybtE APECO1_1062 - yersiniabactin siderophore biosynthetic protein 1855 56.48 +1 2119056..2121077 + 673 117624167 fyuA APECO1_1063 - pesticin/yersiniabactin receptor protein 1856 43.62 -1 2121671..2122477 + 268 117624168 - APECO1_1064 - hypothetical protein 1857 48.70 0 2122610..2124568 + 652 117624169 - APECO1_1065 - putative autotransporter 1858 38.75 -2 2124696..2125748 - 350 117624170 - APECO1_1066 - hypothetical protein 1859 50.49 0 2126063..2127379 + 438 117624171 - APECO1_1067 - shikimate transporter 1860 49.43 0 2127433..2128935 + 500 117624172 amn APECO1_1068 - AMP nucleosidase 1861 39.33 -2 2129278..2129994 + 238 117624173 - APECO1_1069 - hypothetical protein 1862 37.85 -2 2130050..2130337 - 95 117624174 - APECO1_1070 - hypothetical protein 1863 49.30 0 2130624..2132114 - 496 117624175 yeeO APECO1_6020 - hypothetical protein 1864 47.95 0 2132388..2133338 - 316 117624176 cbl APECO1_6021 - transcriptional regulator Cbl 1865 48.80 0 2133440..2134357 - 305 117624177 nac APECO1_6022 - nitrogen assimilation transcriptional regulator 1866 49.89 0 2134815..2135750 - 311 117624178 erfK APECO1_6023 - hypothetical protein 1867 52.31 0 2135812..2136891 - 359 117624179 cobT APECO1_1072 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1868 52.56 0 2136903..2137682 - 259 117624180 cobS APECO1_1073 - cobalamin synthase 1869 50.55 0 2137643..2138188 - 181 117624181 cobU APECO1_1074 - adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 1870 47.94 0 2140861..2141175 - 104 117624182 - APECO1_1075 - hypothetical protein 1871 41.40 -2 2141294..2142508 + 404 117624183 - APECO1_1076 - putative carbohydrate kinase 1872 40.05 -2 2142522..2143280 + 252 117624184 - APECO1_1077 - hypothetical protein 1873 46.79 0 2143337..2144302 + 321 117624185 - APECO1_1078 - hypothetical protein 1874 47.54 0 2144305..2145339 + 344 117624186 - APECO1_1079 - putative phosphotriesterase-related protein 1875 51.42 0 2145991..2146974 - 327 117624187 - APECO1_1080 - putative transposase 1876 49.56 0 2147032..2147370 - 112 117624188 - APECO1_1081 - hypothetical protein 1877 52.32 0 2147654..2148148 - 164 117624189 - APECO1_1082 - hypothetical protein 1878 52.45 0 2148049..2148456 - 135 117624190 - APECO1_1083 - hypothetical protein 1879 56.27 +1 2148710..2149315 - 201 117624191 - APECO1_1084 - hypothetical protein 1880 49.07 0 2150106..2150429 + 107 117624192 - APECO1_1085 - hypothetical protein 1881 55.39 0 2150605..2151012 + 135 117624193 - APECO1_1086 - putative transcriptional regulator 1882 50.49 0 2151091..2151708 + 205 117624194 - APECO1_1087 - hypothetical protein 1883 42.72 -1 2152251..2153102 - 283 117624195 - APECO1_1088 - putative transposase subunit 1884 45.59 -1 2153099..2153620 - 173 117624196 - APECO1_1089 - putative transposase subunit 1885 51.45 0 2154070..2154345 + 91 117624197 - APECO1_1090 - putative transposase subunit 1886 53.33 0 2154572..2154916 - 114 117624198 - APECO1_1091 - hypothetical protein 1887 50.34 0 2155537..2156700 + 387 117624199 - APECO1_1092 - hypothetical protein 1888 58.11 +1 2156745..2157656 + 303 117624200 - APECO1_1093 - hypothetical protein 1889 51.94 0 2157874..2160270 + 798 117624201 - APECO1_1094 - hypothetical protein 1890 54.08 0 2160267..2161172 + 301 117624202 - APECO1_1095 - hypothetical protein 1891 54.53 0 2161169..2162239 + 356 117624203 - APECO1_1097 - putative esterase 1892 44.44 -1 2162267..2163058 + 263 117624204 - APECO1_1098 - hypothetical protein 1893 41.12 -2 2163074..2163484 + 136 117624205 - APECO1_1099 - hypothetical protein 1894 56.67 +1 2163701..2164540 - 279 117624206 - APECO1_1100 - hypothetical protein 1895 56.93 +1 2164631..2165554 - 307 117624207 - APECO1_1101 - hypothetical protein 1896 57.45 +1 2165924..2166292 + 122 117624208 yeeU APECO1_1102 - antitoxin of the YeeV-YeeU toxin-antitoxin system 1897 53.03 0 2166381..2166644 + 87 117624209 yeeV APECO1_1103 - toxin of the YeeV-YeeU toxin-antitoxin system 1898 49.58 0 2167386..2167742 + 118 117624210 yoeF APECO1_1104 - hypothetical protein 1899 46.46 0 2167843..2168238 - 131 117624211 yeeX APECO1_1105 - hypothetical protein 1900 50.71 0 2168344..2169402 - 352 117624212 yeeA APECO1_1106 - hypothetical protein 1901 47.26 0 2169600..2170073 - 157 117624213 sbmC APECO1_1107 - DNA gyrase inhibitor 1902 50.00 0 2170192..2171235 - 347 117624214 dacD APECO1_1108 - D-alanyl-D-alanine carboxypeptidase 1903 49.39 0 2171519..2172994 + 491 117624215 sbcB APECO1_1109 - exonuclease I 1904 50.90 0 2173278..2174336 - 352 117624216 yeeE APECO1_1110 - inner membrane protein 1905 52.97 0 2174515..2175879 - 454 117624217 yeeF APECO1_1111 - amino acid transporter 1906 51.31 0 2176140..2177090 - 316 117624218 yeeY APECO1_1112 - DNA-binding transcriptional regulator 1907 51.03 0 2177115..2177939 - 274 117624219 yeeZ APECO1_1113 - epimerase 1908 42.35 -1 2178022..2178276 - 84 117624220 - APECO1_1114 - hypothetical protein 1909 45.88 -1 2178273..2178551 - 92 117624221 yefM APECO1_1115 - antitoxin YefM 1910 54.67 0 2178994..2179893 + 299 117624222 hisG APECO1_1116 - ATP phosphoribosyltransferase 1911 58.22 +1 2179890..2181203 + 437 117624223 hisD APECO1_1117 - histidinol dehydrogenase 1912 54.72 0 2181200..2182270 + 356 117624224 hisC APECO1_1118 - histidinol-phosphate aminotransferase 1913 53.46 0 2182270..2183337 + 355 117624225 hisB APECO1_1119 - imidazole glycerol-phosphate dehydratase/histidinol phosphatase 1914 55.84 +1 2183337..2183927 + 196 117624226 hisH APECO1_1120 - imidazole glycerol phosphate synthase subunit HisH 50.94 MEAN 4.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0