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Escherichia coli APEC O1, complete genome - 1..5082025 4428 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 54 55.46 0 67675..68370 - 231 117622349 araD APECO1_1923 - L-ribulose-5-phosphate 4-epimerase 55 55.09 0 68655..70157 - 500 117622350 araA APECO1_1922 - L-arabinose isomerase 56 58.20 +1 70168..71868 - 566 117622351 araB APECO1_1921 - ribulokinase 57 52.06 0 72156..73052 + 298 117622352 araC APECO1_1920 - DNA-binding transcriptional regulator AraC 58 33.33 -2 73842..74414 + 190 117622353 - APECO1_1919 - hypothetical protein 59 30.97 -2 74421..74843 + 140 117622354 - APECO1_1918 - hypothetical protein 60 54.38 0 74998..75762 + 254 117622355 yabI APECO1_1917 - putative integral membrane protein YabI 61 56.51 +1 75876..76574 - 232 117622356 thiQ APECO1_1916 - thiamine transporter ATP-binding subunit 62 57.98 +1 76558..78168 - 536 117622357 thiP APECO1_1915 - thiamine transporter membrane protein 63 51.31 0 78144..79139 - 331 117622358 tbpA APECO1_1914 - thiamine transporter substrate binding subunit 64 55.25 0 79291..80946 - 551 117622359 sgrR APECO1_1913 - transcriptional regulator SgrR 65 51.82 0 81274..81879 - 201 117622360 leuD APECO1_1912 - isopropylmalate isomerase small subunit 66 55.53 0 81890..83290 - 466 117622361 leuC APECO1_1911 - isopropylmalate isomerase large subunit 67 54.89 0 83293..84387 - 364 117622362 leuB APECO1_1910 - 3-isopropylmalate dehydrogenase 68 52.74 0 84384..85955 - 523 117622363 leuA APECO1_1909 - 2-isopropylmalate synthase 69 45.48 -1 86707..87735 + 342 117622364 leuO APECO1_1908 - leucine transcriptional activator 70 52.73 0 87963..89777 + 604 117622365 ilvI APECO1_1907 - acetolactate synthase 3 catalytic subunit 71 50.00 0 89750..90271 + 173 117622366 ilvH APECO1_1906 - acetolactate synthase 3 regulatory subunit 72 55.32 0 90451..91455 + 334 117622367 fruR APECO1_1905 - DNA-binding transcriptional regulator FruR 73 54.85 0 92418..93458 + 346 117622368 mraW APECO1_1904 - S-adenosyl-methyltransferase MraW 74 50.55 0 93455..93820 + 121 117622369 ftsL APECO1_1903 - cell division protein FtsL 75 53.65 0 93836..95602 + 588 117622370 ftsI APECO1_1902 - peptidoglycan synthetase FtsI precursor 76 56.85 +1 95589..97076 + 495 117622371 murE APECO1_1901 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 77 54.08 0 97073..98431 + 452 117622372 murF APECO1_1900 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 78 53.28 0 98425..99507 + 360 117622373 mraY APECO1_1899 - phospho-N-acetylmuramoyl-pentapeptide-transferase 79 55.43 0 99510..100826 + 438 117622374 murD APECO1_1898 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 80 52.69 0 100826..102070 + 414 117622375 ftsW APECO1_1897 - cell division protein FtsW 81 55.90 +1 102067..103134 + 355 117622376 murG APECO1_1896 - N-acetylglucosaminyl transferase 82 54.13 0 103188..104663 + 491 117622377 murC APECO1_1895 - UDP-N-acetylmuramate--L-alanine ligase 83 51.36 0 104656..105576 + 306 117622378 ddl APECO1_1894 - D-alanine--D-alanine ligase 84 53.07 0 105578..106408 + 276 117622379 ftsQ APECO1_1893 - cell division protein FtsQ 85 51.78 0 106405..107667 + 420 117622380 ftsA APECO1_1892 - cell division protein FtsA 86 53.73 0 107728..108879 + 383 117622381 ftsZ APECO1_1891 - cell division protein FtsZ 87 50.98 0 108980..109897 + 305 117622382 lpxC APECO1_1890 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 88 52.72 0 110053..110640 + 195 117622383 secM APECO1_1889 - SecA regulator SecM 89 52.14 0 110702..113407 + 901 117622384 secA APECO1_1888 - preprotein translocase subunit SecA 90 49.37 0 113467..113865 + 132 117622385 mutT APECO1_1887 - nucleoside triphosphate pyrophosphohydrolase 91 51.61 0 114160..114903 - 247 117622386 yacF APECO1_1886 - hypothetical protein 92 52.33 0 114903..115523 - 206 117622387 coaE APECO1_1885 - dephospho-CoA kinase 93 51.44 0 115748..116791 + 347 117622388 guaC APECO1_1884 - guanosine 5'-monophosphate oxidoreductase 94 52.12 0 116826..118028 - 400 117622389 hofC APECO1_1883 - type IV pilin biogenesis protein 95 53.39 0 118018..119403 - 461 117622390 hofB APECO1_1882 - hypothetical protein 96 52.61 0 119413..119853 - 146 117622391 pppD APECO1_1881 - putative major pilin subunit 97 52.35 0 120057..120992 - 311 117622392 nadC APECO1_1880 - quinolinate phosphoribosyltransferase 98 54.53 0 121038..121589 + 183 117622393 ampD APECO1_1879 - N-acetyl-anhydromuranmyl-L-alanine amidase 99 51.46 0 121586..122440 + 284 117622394 ampE APECO1_1878 - regulatory protein AmpE 100 52.59 0 122483..123853 - 456 117622395 aroP APECO1_1877 - aromatic amino acid transporter 101 48.77 0 124381..126162 + 593 117622396 usp APECO1_1876 - uropathogenic specific protein 102 36.49 -2 126165..126449 + 94 117622397 - APECO1_1875 - hypothetical protein 103 38.83 -2 126857..127147 + 96 117622398 - APECO1_1874 - hypothetical protein 104 32.32 -2 127550..127846 + 98 117622399 - APECO1_1873 - hypothetical protein 105 55.56 0 128302..129066 + 254 117622400 pdhR APECO1_1872 - transcriptional regulator PdhR 106 53.08 0 129227..131890 + 887 117622401 aceE APECO1_1871 - pyruvate dehydrogenase subunit E1 107 54.62 0 131905..133797 + 630 117622402 aceF APECO1_1870 - dihydrolipoamide acetyltransferase 108 52.38 0 134001..135428 + 475 117622403 lpd APECO1_1869 - dihydrolipoamide dehydrogenase 109 53.98 0 135670..137427 - 585 117622404 yacH APECO1_1868 - hypothetical protein 110 55.29 0 137629..140379 + 916 117622405 acnB APECO1_1867 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 111 52.49 0 140506..140766 + 86 117622406 yacL APECO1_1866 - hypothetical protein 112 47.28 0 140950..141501 - 183 117622407 speD APECO1_1865 - S-adenosylmethionine decarboxylase 113 50.29 0 141760..142626 - 288 117622408 speE APECO1_1864 - spermidine synthase 114 49.10 0 142732..143118 - 128 117622409 yacC APECO1_1863 - hypothetical protein 115 53.97 0 143245..144795 + 516 117622410 cueO APECO1_1862 - multicopper oxidase 116 55.63 0 144842..147232 - 796 117622411 gcd APECO1_1861 - glucose dehydrogenase 117 49.13 0 147399..147974 + 191 117622412 hpt APECO1_1860 - hypoxanthine-guanine phosphoribosyltransferase 118 50.38 0 148015..148677 - 220 117622413 yadF APECO1_1859 - carbonic anhydrase 119 48.44 0 148786..149712 + 308 117622414 yadG APECO1_1858 - putative ABC transporter ATP-binding protein YadG 120 50.84 0 149709..150479 + 256 117622415 - APECO1_1857 - hypothetical protein 121 48.98 0 150584..151024 + 146 117622416 yadI APECO1_1856 - putative PTS system IIA component YadI 122 48.37 0 151088..152317 + 409 117622417 yadE APECO1_1855 - hypothetical protein 123 53.28 0 152321..152701 - 126 117622418 - APECO1_1854 - aspartate alpha-decarboxylase 124 48.70 0 152975..153859 + 294 117622419 - APECO1_1853 - hypothetical protein 125 52.23 0 153941..154792 - 283 117622420 panC APECO1_1852 - pantoate--beta-alanine ligase 126 54.84 0 154804..155598 - 264 117622421 panB APECO1_1851 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 127 41.23 -2 155710..156975 - 421 117622422 yadC APECO1_1850 - putative fimbrial-like adhesin protein 128 43.38 -1 157025..157621 - 198 117622423 yadK APECO1_1849 - hypothetical protein 129 42.76 -1 157648..158262 - 204 117622424 yadL APECO1_1848 - hypothetical protein 130 41.45 -2 158268..158834 - 188 117622425 yadM APECO1_1847 - putative fimbrial-like adhesin protein 131 44.77 -1 158851..161439 - 862 117622426 htrE APECO1_1846 - putative outer membrane usher protein 132 44.26 -1 161474..162214 - 246 117622427 ecpD APECO1_1845 - putative chaperone protein EcpD 133 42.60 -1 162323..162937 - 204 117622428 yadN APECO1_1844 - putative fimbrial-like adhesin protein 134 49.58 0 163275..163754 - 159 117622429 folK APECO1_1843 - 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase 135 56.26 +1 163751..165115 - 454 117622430 pcnB APECO1_1842 - poly(A) polymerase I 136 54.18 0 165208..166104 - 298 162317587 yadB APECO1_1841 - glutamyl-Q tRNA(Asp) synthetase 137 52.32 0 166171..166644 - 157 117622432 dksA APECO1_1840 - DnaK transcriptional regulator DksA 138 49.79 0 166804..167508 - 234 117622433 - APECO1_1839 - sugar fermentation stimulation protein A 139 56.45 +1 167523..168266 - 247 117622434 yadP APECO1_1838 - 2'-5' RNA ligase 140 56.61 +1 168082..170556 + 824 117622435 hrpB APECO1_1837 - ATP-dependent RNA helicase HrpB 141 54.83 0 170650..173184 + 844 117622436 mrcB APECO1_1836 - penicillin-binding protein 1b 142 51.43 0 173404..175647 + 747 117622437 fhuA APECO1_1835 - ferrichrome outer membrane transporter 143 56.27 +1 175698..176495 + 265 117622438 fhuC APECO1_1834 - iron-hydroxamate transporter ATP-binding subunit 144 54.32 0 176495..177385 + 296 117622439 fhuD APECO1_1833 - iron-hydroxamate transporter substrate-binding subunit 145 59.71 +1 177382..179364 + 660 117622440 fhuB APECO1_1832 - iron-hydroxamate transporter permease subunit 146 55.66 +1 179399..180679 - 426 117622441 hemL APECO1_1831 - glutamate-1-semialdehyde aminotransferase 147 53.59 0 180904..182325 + 473 117622442 yadQ APECO1_1830 - chloride channel protein 148 50.72 0 182407..182751 + 114 117622443 yadR APECO1_1829 - iron-sulfur cluster insertion protein ErpA 149 52.88 0 182798..183421 - 207 117622444 yadS APECO1_1828 - hypothetical protein 150 53.18 0 183459..184259 - 266 117622445 yadT APECO1_1827 - vitamin B12-transporter protein BtuF 151 52.93 0 184252..184950 - 232 117622446 - APECO1_1826 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 152 47.89 0 185034..186551 + 505 117622447 dgt APECO1_1825 - deoxyguanosinetriphosphate triphosphohydrolase 153 53.75 0 186681..188105 + 474 117622448 htrA APECO1_1824 - serine endoprotease 50.94 MEAN 4.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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