version 1.0
Escherichia coli 536, complete genome - 1..4938920 4620 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3399 50.14 0 3617512..3617874 - 120 110643616 - ECP_3467 - hypothetical protein 3400 50.99 0 3617891..3618796 - 301 110643617 - ECP_3468 - hypothetical protein 3401 52.64 0 3618956..3619960 - 334 110643618 - ECP_3469 - tryptophanyl-tRNA synthetase 3402 52.57 0 3619953..3620711 - 252 110643619 - ECP_3470 - phosphoglycolate phosphatase 3403 50.15 0 3620704..3621381 - 225 110643620 - ECP_3471 - ribulose-phosphate 3-epimerase 3404 49.10 0 3621399..3622235 - 278 110643621 - ECP_3472 - DNA adenine methylase 3405 54.18 0 3623722..3624810 - 362 110643622 aroB ECP_3475 - 3-dehydroquinate synthase 3406 47.64 0 3624867..3625544 - 225 110643623 aroK ECP_3476 - shikimate kinase I 3407 53.67 0 3625789..3627027 - 412 110643624 - ECP_3477 - outer membrane porin HofQ 3408 52.35 0 3626939..3627343 - 134 110643625 - ECP_3478 - hypothetical protein 3409 52.38 0 3627333..3627773 - 146 110643626 - ECP_3479 - hypothetical protein 3410 54.26 0 3627757..3628296 - 179 110643627 - ECP_3480 - hypothetical protein 3411 56.79 +1 3628296..3629075 - 259 110643628 - ECP_3481 - hypothetical protein 3412 55.23 0 3629195..3631747 + 850 110643629 mrcA ECP_3482 - peptidoglycan synthetase 3413 50.62 0 3631914..3632474 - 186 110643630 nudE ECP_3483 - ADP-ribose diphosphatase NudE 3414 52.72 0 3632794..3634929 + 711 110643631 - ECP_3484 - putative membrane protein IgaA 3415 51.12 0 3634994..3635662 + 222 110643632 - ECP_3485 - putative hydrolase 3416 52.74 0 3635673..3636074 + 133 110643633 - ECP_3486 - ribosome-associated heat shock protein Hsp15 3417 52.88 0 3636093..3636977 + 294 110643634 hslO ECP_3487 - Hsp33-like chaperonin 3418 50.32 0 3637040..3638764 - 574 110643635 - ECP_3488 - hypothetical protein 3419 54.16 0 3639143..3640765 + 540 110643636 - ECP_3489 - phosphoenolpyruvate carboxykinase 3420 56.47 +1 3640842..3642194 - 450 110643637 envZ ECP_3490 - osmolarity sensor protein 3421 55.00 0 3642191..3642910 - 239 110643638 ompR ECP_3491 - osmolarity response regulator 3422 49.69 0 3643138..3643614 + 158 110643639 greB ECP_3492 - transcription elongation factor GreB 3423 56.59 +1 3643711..3646032 + 773 110643640 - ECP_3493 - S1 RNA-binding domain-containing protein 3424 48.25 0 3646470..3646697 + 75 110643641 feoA ECP_3494 - ferrous iron transport protein A 3425 54.87 0 3646714..3649035 + 773 110643642 feoB ECP_3495 - ferrous iron transport protein B 3426 53.59 0 3649046..3649282 + 78 110643643 - ECP_3496 - hypothetical protein 3427 47.32 0 3649485..3650378 + 297 110643644 - ECP_3497 - hypothetical protein 3428 56.42 +1 3650598..3651368 - 256 110643645 - ECP_3498 - carboxylesterase BioH 3429 55.41 0 3651406..3652089 + 227 110643646 - ECP_3499 - gluconate periplasmic binding protein 3430 52.60 0 3652148..3652723 + 191 110643647 - ECP_3500 - putative DNA uptake protein 3431 53.30 0 3653087..3654403 + 438 110643648 - ECP_3501 - high-affinity gluconate transporter 3432 54.58 0 3654514..3656598 - 694 110643649 malQ ECP_3502 - 4-alpha-glucanotransferase 3433 52.01 0 3656608..3659001 - 797 110643650 - ECP_3503 - maltodextrin phosphorylase 3434 54.10 0 3659624..3662329 + 901 110643651 - ECP_3504 - transcriptional regulator MalT 3435 59.69 +1 3662372..3663388 - 338 110643652 - ECP_3505 - RNA 3'-terminal-phosphate cyclase 3436 50.86 0 3663392..3664618 - 408 110643653 - ECP_3506 - protein RtcB 3437 55.16 0 3664807..3666405 + 532 110643654 - ECP_3507 - transcriptional regulatory protein RtcR 3438 54.15 0 3666387..3667145 - 252 110643655 - ECP_3508 - DNA-binding transcriptional repressor GlpR 3439 54.87 0 3667162..3667992 - 276 110643656 - ECP_3509 - intramembrane serine protease GlpG 3440 54.13 0 3668037..3668363 - 108 110643657 glpE ECP_3510 - thiosulfate sulfurtransferase 3441 54.78 0 3668553..3670058 + 501 110643658 glpD ECP_3511 - glycerol-3-phosphate dehydrogenase 3442 41.58 -1 3670112..3670717 - 201 110643659 - ECP_3512 - hypothetical protein 3443 45.56 0 3670720..3671496 - 258 110643660 - ECP_3513 - hypothetical protein 3444 46.41 0 3671499..3672209 - 236 110643661 - ECP_3514 - hypothetical protein 3445 39.48 -2 3672383..3673504 - 373 110643662 - ECP_3515 - putative fimbrial adhesin precursor 3446 39.23 -2 3673519..3674298 - 259 110643663 - ECP_3516 - putative fimbrial chaperone precursor 3447 36.47 -2 3674264..3674836 - 190 110643664 - ECP_3517 - putative minor fimbrial subunit precursor 3448 38.30 -2 3674787..3675350 - 187 110643665 - ECP_3518 - putative minor fimbrial subunit precursor 3449 41.97 -1 3675350..3677944 - 864 110643666 - ECP_3519 - outer membrane usher protein 3450 38.25 -2 3677981..3678733 - 250 110643667 - ECP_3520 - putative fimbrial chaperone protein 3451 47.80 0 3678834..3679538 - 234 110643668 - ECP_3521 - putative major fimbrial subunit precursor 3452 51.47 0 3680033..3682480 - 815 110643669 - ECP_3522 - glycogen phosphorylase 3453 54.95 0 3682499..3683932 - 477 110643670 glgA ECP_3523 - glycogen synthase 3454 52.78 0 3683932..3685227 - 431 110643671 glgC ECP_3524 - glucose-1-phosphate adenylyltransferase 3455 53.90 0 3685245..3687218 - 657 110643672 - ECP_3525 - glycogen debranching enzyme 3456 52.99 0 3687215..3689401 - 728 110643673 - ECP_3526 - glycogen branching enzyme 3457 53.44 0 3689674..3690777 - 367 110643674 - ECP_3527 - aspartate-semialdehyde dehydrogenase 3458 50.00 0 3690969..3691562 + 197 110643675 - ECP_3528 - dITP- and XTP- hydrolyzing protein 3459 50.54 0 3691608..3692903 - 431 110643676 - ECP_3529 - putative DNA processing protein 3460 49.40 0 3692810..3694906 - 698 110643677 - ECP_3530 - DNA helicase 3461 55.48 0 3695047..3696387 - 446 110643678 - ECP_3531 - low affinity gluconate transporter 3462 50.72 0 3696391..3696879 - 162 110643679 gntK ECP_3532 - gluconate kinase 1 3463 54.62 0 3697057..3698052 - 331 110643680 - ECP_3533 - gluconate utilization operon gntUKR repressor GalR/LacI familiy 3464 51.87 0 3698145..3698840 - 231 110643681 - ECP_3534 - putative pirin-related protein 3465 51.16 0 3698963..3700000 - 345 110643682 - ECP_3535 - putative dehydrogenase 3466 50.72 0 3700334..3700822 + 162 110643683 - ECP_3536 - putative acetyltransferase YhhY 3467 34.51 -2 3701058..3702242 + 394 110643684 - ECP_3537 - hypothetical protein 3468 29.82 -2 3702271..3702726 + 151 110643685 - ECP_3538 - hypothetical protein 3469 45.26 -1 3703176..3703460 + 94 110643686 - ECP_3539 - hypothetical protein 3470 53.52 0 3703498..3705231 - 577 110643687 ggt ECP_3540 - gamma-glutamyltranspeptidase periplasmic precursor 3471 52.15 0 3705351..3705791 + 146 110643688 - ECP_3541 - hypothetical protein 3472 55.65 0 3705778..3706521 - 247 110643689 ugpQ ECP_3542 - cytoplasmic glycerophosphodiester phosphodiesterase 3473 57.61 +1 3706518..3707588 - 356 110643690 ugpC ECP_3543 - glycerol-3-phosphate transporter ATP-binding subunit 3474 53.07 0 3707590..3708435 - 281 110643691 - ECP_3544 - glycerol-3-phosphate transporter membrane protein 3475 55.63 0 3708432..3709319 - 295 110643692 - ECP_3545 - glycerol-3-phosphate transporter permease 3476 52.85 0 3709417..3710733 - 438 110643693 - ECP_3546 - glycerol-3-phosphate transporter periplasmic binding protein 3477 57.00 +1 3711130..3711843 - 237 110643694 livF ECP_3547 - leucine/isoleucine/valine transporter ATP-binding subunit 3478 53.91 0 3711845..3712612 - 255 110643695 livG ECP_3548 - leucine/isoleucine/valine transporter ATP-binding subunit 3479 57.04 +1 3712609..3713886 - 425 110643696 livM ECP_3549 - leucine/isoleucine/valine transporter permease subunit 3480 56.31 +1 3713883..3714809 - 308 110643697 - ECP_3550 - branched-chain amino acid transporter permease subunit LivH 3481 53.69 0 3714857..3715966 - 369 110643698 - ECP_3551 - leucine-specific binding protein precursor 3482 54.69 0 3716390..3716773 + 127 110643699 - ECP_3552 - hypothetical protein 3483 54.71 0 3716961..3718064 - 367 110643700 - ECP_3553 - Leu/Ile/Val-binding protein precursor 3484 53.45 0 3718335..3719189 - 284 110643701 - ECP_3554 - RNA polymerase factor sigma-32 3485 53.35 0 3719434..3720492 - 352 110643702 ftsX ECP_3555 - cell division protein FtsX 3486 55.75 0 3720485..3721153 - 222 110643703 - ECP_3556 - cell division protein FtsE 3487 53.57 0 3721156..3722652 - 498 110643704 - ECP_3557 - cell division protein FtsY 3488 54.10 0 3722802..3723398 + 198 110643705 - ECP_3558 - 16S rRNA m(2)G966-methyltransferase 3489 44.81 -1 3723388..3723657 + 89 110643706 - ECP_3559 - hypothetical protein 3490 50.83 0 3723660..3724019 - 119 110643707 - ECP_3560 - hypothetical protein 3491 56.62 +1 3724160..3724786 + 208 110643708 - ECP_3561 - hypothetical protein 3492 57.75 +1 3724860..3727058 + 732 110643709 zntA ECP_3562 - zinc/cadmium/mercury/lead-transporting ATPase 3493 48.96 0 3727236..3727958 - 240 110643710 - ECP_3563 - putative transposase 3494 46.17 0 3728063..3728584 - 173 110643711 - ECP_3564 - IS putative transposase 3495 50.81 0 3728763..3729008 - 81 110643712 - ECP_3565 - cell developmental protein SirA 3496 50.90 0 3729229..3729894 + 221 110643713 - ECP_3566 - hypothetical protein 3497 51.43 0 3729967..3730524 + 185 110643714 - ECP_3567 - hypothetical protein 3498 55.50 0 3730528..3731745 - 405 110643715 - ECP_3568 - hypothetical protein 50.53 MEAN 5.23 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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