version 1.0
Escherichia coli 536, complete genome - 1..4938920 4620 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3322 49.62 0 3552416..3553747 - 443 110643539 secY ECP_3388 - preprotein translocase subunit SecY 3323 53.56 0 3553755..3554189 - 144 110643540 rplO ECP_3389 - 50S ribosomal protein L15 3324 50.00 0 3554193..3554372 - 59 110643541 rpmD ECP_3390 - 50S ribosomal protein L30 3325 49.80 0 3554376..3554879 - 167 110643542 rpsE ECP_3391 - 30S ribosomal protein S5 3326 53.67 0 3554894..3555247 - 117 110643543 rplR ECP_3392 - 50S ribosomal protein L18 3327 52.06 0 3555257..3555790 - 177 110643544 rplF ECP_3393 - 50S ribosomal protein L6 3328 50.13 0 3555803..3556195 - 130 110643545 rpsH ECP_3394 - 30S ribosomal protein S8 3329 52.61 0 3556229..3556534 - 101 110643546 rpsN ECP_3395 - 30S ribosomal protein S14 3330 49.81 0 3556549..3557088 - 179 110643547 rplE ECP_3396 - 50S ribosomal protein L5 3331 45.71 0 3557103..3557417 - 104 110643548 rplX ECP_3397 - 50S ribosomal protein L24 3332 51.08 0 3557428..3557799 - 123 110643549 rplN ECP_3398 - 50S ribosomal protein L14 3333 47.45 0 3557964..3558218 - 84 110643550 rpsQ ECP_3399 - 30S ribosomal protein S17 3334 54.17 0 3558218..3558409 - 63 110643551 - ECP_3400 - 50S ribosomal protein L29 3335 51.58 0 3558409..3558819 - 136 110643552 rplP ECP_3401 - 50S ribosomal protein L16 3336 51.00 0 3558832..3559533 - 233 110643553 rpsC ECP_3402 - 30S ribosomal protein S3 3337 49.85 0 3559551..3559883 - 110 110643554 rplV ECP_3403 - 50S ribosomal protein L22 3338 49.10 0 3559898..3560176 - 92 110643555 rpsS ECP_3404 - 30S ribosomal protein S19 3339 52.68 0 3560193..3561014 - 273 110643556 rplB ECP_3405 - 50S ribosomal protein L2 3340 48.18 0 3561032..3561334 - 100 110643557 rplW ECP_3406 - 50S ribosomal protein L23 3341 53.14 0 3561331..3561936 - 201 110643558 rplD ECP_3407 - 50S ribosomal protein L4 3342 51.59 0 3561947..3562576 - 209 110643559 rplC ECP_3408 - 50S ribosomal protein L3 3343 55.13 0 3562609..3562920 - 103 110643560 rpsJ ECP_3409 - 30S ribosomal protein S10 3344 45.95 0 3563158..3563577 - 139 110643561 - ECP_3410 - chromosome replication protein PioO 3345 49.05 0 3563579..3565048 - 489 110643562 - ECP_3411 - general secretion pathway protein A 3346 41.79 -1 3565228..3566043 + 271 110643563 - ECP_3412 - general secretion pathway protein C 3347 49.82 0 3566015..3567979 + 654 110643564 - ECP_3413 - general secretion pathway protein D precursor 3348 52.09 0 3567989..3569470 + 493 110643565 - ECP_3414 - general secretion pathway protein E 3349 50.71 0 3569467..3570663 + 398 110643566 - ECP_3415 - putative general secretion pathway protein F 3350 49.32 0 3570673..3571110 + 145 110643567 - ECP_3416 - putative general secretion pathway protein G precursor 3351 55.69 0 3571118..3571627 + 169 110643568 - ECP_3417 - putative general secretion pathway protein H precursor 3352 48.74 0 3571585..3572019 + 144 110643569 - ECP_3418 - general secretion pathway protein I precursor 3353 50.17 0 3572012..3572599 + 195 110643570 - ECP_3419 - general secretion pathway protein J precursor 3354 49.80 0 3572592..3573575 + 327 110643571 - ECP_3420 - general secretion pathway protein K 3355 48.28 0 3573590..3574753 + 387 110643572 - ECP_3421 - general secretion pathway protein L 3356 47.27 0 3574750..3575244 + 164 110643573 - ECP_3422 - putative general secretion pathway protein M 3357 52.88 0 3575271..3576293 + 340 110643574 - ECP_3423 - transposase for insertion sequence IS100 3358 50.38 0 3576293..3577072 + 259 110643575 - ECP_3424 - transposase/IS protein 3359 50.29 0 3577170..3577847 + 225 110643576 - ECP_3425 - type 4 prepilin-like proteins leader peptide processing enzyme 3360 42.98 -1 3577876..3578352 - 158 110643577 - ECP_3426 - bacterioferritin, iron storage and detoxification protein 3361 46.67 0 3578424..3578618 - 64 110643578 - ECP_3427 - bacterioferritin-associated ferredoxin 3362 50.02 0 3578787..3581489 - 900 110643579 - ECP_3428 - bifunctional chitinase/lysozyme precursor 3363 53.42 0 3581781..3582965 - 394 110643580 - ECP_3429 - elongation factor Tu 3364 50.87 0 3583036..3585150 - 704 110643581 - ECP_3430 - elongation factor G 3365 49.68 0 3585247..3585717 - 156 110643582 - ECP_3431 - 30S ribosomal protein S7 3366 53.33 0 3585814..3586188 - 124 110643583 rpsL ECP_3432 - 30S ribosomal protein S12 3367 50.00 0 3586314..3586601 - 95 110643584 - ECP_3433 - tRNA 2-thiouridine synthesizing protein B 3368 50.83 0 3586609..3586968 - 119 110643585 - ECP_3434 - hypothetical protein 3369 54.26 0 3586968..3587354 - 128 110643586 - ECP_3435 - hypothetical protein 3370 46.89 0 3587354..3588076 - 240 110643587 - ECP_3436 - hypothetical protein 3371 48.34 0 3588243..3589055 - 270 110643588 - ECP_3437 - FKBP-type peptidyl-prolyl cis-trans isomerase 3372 55.16 0 3589555..3590145 - 196 110643589 - ECP_3438 - FKBP-type peptidyl-prolyl cis-trans isomerase 3373 47.76 0 3590240..3590440 - 66 110643590 - ECP_3439 - hypothetical protein 3374 56.34 +1 3592255..3592806 - 183 110643591 - ECP_3442 - glutathione-regulated potassium-efflux system ancillary protein KefG 3375 55.69 0 3592937..3594850 + 637 110643592 - ECP_3443 - putative ABC transporter ATP-binding protein 3376 53.67 0 3594850..3595872 + 340 110643593 - ECP_3444 - putative hydrolase 3377 50.23 0 3595866..3596084 + 72 110643594 - ECP_3445 - hypothetical protein 3378 53.45 0 3596138..3597007 + 289 110643595 - ECP_3446 - phosphoribulokinase 3379 52.35 0 3597062..3597466 - 134 110643596 - ECP_3447 - hypothetical protein 3380 49.76 0 3597768..3598400 + 210 110643597 - ECP_3448 - cAMP-regulatory protein 3381 52.94 0 3598451..3600541 + 696 110643598 - ECP_3449 - hypothetical protein 3382 53.97 0 3600619..3601839 - 406 110643599 argD ECP_3450 - bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein 3383 52.48 0 3601925..3602488 - 187 110643600 - ECP_3451 - para-aminobenzoate synthase component II 3384 51.41 0 3602520..3603122 - 200 110643601 - ECP_3452 - cell filamentation protein Fic 3385 52.98 0 3603112..3603279 - 55 110643602 - ECP_3453 - hypothetical protein 3386 51.31 0 3603384..3603956 - 190 110643603 - ECP_3454 - peptidyl-prolyl cis-trans isomerase A (rotamase A) 3387 51.27 0 3604227..3605408 + 393 110643604 - ECP_3455 - hypothetical protein 3388 54.40 0 3605670..3608213 + 847 110643605 - ECP_3456 - nitrite reductase [NAD(P)H] large subunit 3389 54.74 0 3608210..3608536 + 108 110643606 nirD ECP_3457 - nitrite reductase small subunit 3390 54.77 0 3608662..3609468 + 268 110643607 - ECP_3458 - nitrite transporter NirC 3391 53.35 0 3609487..3610860 + 457 110643608 cysG ECP_3459 - siroheme synthase 3392 43.45 -1 3611112..3611279 + 55 110643609 - ECP_3460 - hypothetical protein 3393 56.91 +1 3611386..3612471 - 361 110643610 - ECP_3461 - hypothetical protein 3394 52.64 0 3612483..3613787 - 434 110643611 - ECP_3462 - hypothetical protein 3395 48.31 0 3613799..3614152 - 117 110643612 - ECP_3463 - hypothetical protein 3396 52.67 0 3614163..3615041 - 292 110643613 - ECP_3464 - putative hydrolase 3397 54.03 0 3615038..3616264 - 408 110643614 - ECP_3465 - putative mutase 3398 54.47 0 3616265..3617428 - 387 110643615 - ECP_3466 - hypothetical protein 3399 50.14 0 3617512..3617874 - 120 110643616 - ECP_3467 - hypothetical protein 3400 50.99 0 3617891..3618796 - 301 110643617 - ECP_3468 - hypothetical protein 3401 52.64 0 3618956..3619960 - 334 110643618 - ECP_3469 - tryptophanyl-tRNA synthetase 3402 52.57 0 3619953..3620711 - 252 110643619 - ECP_3470 - phosphoglycolate phosphatase 3403 50.15 0 3620704..3621381 - 225 110643620 - ECP_3471 - ribulose-phosphate 3-epimerase 3404 49.10 0 3621399..3622235 - 278 110643621 - ECP_3472 - DNA adenine methylase 3405 54.18 0 3623722..3624810 - 362 110643622 aroB ECP_3475 - 3-dehydroquinate synthase 3406 47.64 0 3624867..3625544 - 225 110643623 aroK ECP_3476 - shikimate kinase I 3407 53.67 0 3625789..3627027 - 412 110643624 - ECP_3477 - outer membrane porin HofQ 3408 52.35 0 3626939..3627343 - 134 110643625 - ECP_3478 - hypothetical protein 3409 52.38 0 3627333..3627773 - 146 110643626 - ECP_3479 - hypothetical protein 3410 54.26 0 3627757..3628296 - 179 110643627 - ECP_3480 - hypothetical protein 3411 56.79 +1 3628296..3629075 - 259 110643628 - ECP_3481 - hypothetical protein 3412 55.23 0 3629195..3631747 + 850 110643629 mrcA ECP_3482 - peptidoglycan synthetase 3413 50.62 0 3631914..3632474 - 186 110643630 nudE ECP_3483 - ADP-ribose diphosphatase NudE 3414 52.72 0 3632794..3634929 + 711 110643631 - ECP_3484 - putative membrane protein IgaA 3415 51.12 0 3634994..3635662 + 222 110643632 - ECP_3485 - putative hydrolase 3416 52.74 0 3635673..3636074 + 133 110643633 - ECP_3486 - ribosome-associated heat shock protein Hsp15 3417 52.88 0 3636093..3636977 + 294 110643634 hslO ECP_3487 - Hsp33-like chaperonin 3418 50.32 0 3637040..3638764 - 574 110643635 - ECP_3488 - hypothetical protein 3419 54.16 0 3639143..3640765 + 540 110643636 - ECP_3489 - phosphoenolpyruvate carboxykinase 3420 56.47 +1 3640842..3642194 - 450 110643637 envZ ECP_3490 - osmolarity sensor protein 3421 55.00 0 3642191..3642910 - 239 110643638 ompR ECP_3491 - osmolarity response regulator 50.53 MEAN 5.23 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0