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Escherichia coli 536, complete genome - 1..4938920 4620 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3236 56.03 +1 3469506..3470924 + 472 110643453 gltD ECP_3302 - glutamate synthase subunit beta 3237 49.29 0 3471108..3472235 + 375 110643454 - ECP_3303 - hypothetical protein 3238 48.39 0 3472295..3472759 - 154 110643455 - ECP_3304 - hypothetical protein 3239 57.99 +1 3472756..3473631 - 291 110643456 - ECP_3305 - N-acetylmannosamine kinase 3240 58.41 +1 3473628..3474317 - 229 110643457 - ECP_3306 - N-acetylmannosamine-6-phosphate 2-epimerase 3241 55.26 0 3474365..3475855 - 496 110643458 - ECP_3307 - putative sialic acid transporter 3242 53.02 0 3475964..3476857 - 297 110643459 - ECP_3308 - N-acetylneuraminate lyase 3243 53.54 0 3476979..3477770 - 263 110643460 - ECP_3309 - transcriptional regulator NanR 3244 55.22 0 3477878..3478375 - 165 110643461 - ECP_3310 - ClpXP protease specificity-enhancing factor 3245 53.68 0 3478381..3479019 - 212 110643462 sspA ECP_3311 - stringent starvation protein A 3246 44.76 -1 3478961..3479170 + 69 110643463 - ECP_3312 - hypothetical protein 3247 52.16 0 3479414..3479806 - 130 110643464 rpsI ECP_3313 - 30S ribosomal protein S9 3248 50.58 0 3479822..3480250 - 142 110643465 rplM ECP_3314 - 50S ribosomal protein L13 3249 51.68 0 3480470..3481597 - 375 110643466 - ECP_3315 - putative ATPase 3250 54.39 0 3481791..3482189 + 132 110643467 - ECP_3316 - cytochrome d ubiquinol oxidase subunit III 3251 52.27 0 3482343..3483710 + 455 110643468 - ECP_3317 - serine endoprotease 3252 52.81 0 3483800..3484867 + 355 110643469 - ECP_3318 - serine endoprotease 3253 51.65 0 3484930..3485868 - 312 110643470 - ECP_3319 - malate dehydrogenase 3254 40.80 -1 3486146..3486319 + 57 110643471 - ECP_3320 - hypothetical protein 3255 48.20 0 3486303..3486773 + 156 110643472 - ECP_3321 - arginine repressor 3256 48.48 0 3487137..3487400 + 87 110643473 - ECP_3322 - hypothetical protein 3257 42.86 -1 3487455..3487727 - 90 110643474 - ECP_3323 - hypothetical protein 3258 51.47 0 3487819..3489786 - 655 110643475 - ECP_3324 - p-hydroxybenzoic acid efflux subunit AaeB 3259 53.27 0 3489792..3490724 - 310 110643476 - ECP_3325 - p-hydroxybenzoic acid efflux subunit AaeA 3260 47.55 0 3490732..3490935 - 67 110643477 - ECP_3326 - hypothetical protein 3261 52.15 0 3491118..3492047 + 309 110643478 - ECP_3327 - putative DNA-binding transcriptional regulator 3262 54.22 0 3492175..3493620 - 481 110643479 - ECP_3328 - protease TldD 3263 53.33 0 3493776..3497576 - 1266 110643480 - ECP_3329 - hypothetical protein 3264 52.18 0 3497644..3499113 - 489 110643481 - ECP_3330 - ribonuclease G 3265 54.04 0 3499103..3499696 - 197 110643482 - ECP_3331 - Maf-like protein 3266 51.53 0 3499705..3500193 - 162 110643483 - ECP_3332 - rod shape-determining protein MreD 3267 55.71 0 3500193..3501296 - 367 110643484 - ECP_3333 - cell wall structural complex MreBCD transmembrane component MreC 3268 54.21 0 3501362..3502405 - 347 110643485 - ECP_3334 - rod shape-determining protein MreB 3269 48.68 0 3502513..3502701 + 62 110643486 - ECP_3335 - hypothetical protein 3270 50.28 0 3502710..3504650 - 646 110643487 - ECP_3336 - regulatory protein CsrD 3271 55.28 0 3504802..3505776 + 324 110643488 - ECP_3337 - zinc-binding dehydrogenase 3272 40.61 -1 3505813..3505977 + 54 110643489 - ECP_3338 - hypothetical protein 3273 47.27 0 3506185..3506349 + 54 110643490 - ECP_3339 - hypothetical protein 3274 51.80 0 3506754..3507224 + 156 110643491 - ECP_3340 - acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 3275 53.04 0 3507235..3508584 + 449 110643492 - ECP_3341 - acetyl-CoA carboxylase biotin carboxylase subunit 3276 50.43 0 3508676..3509722 - 348 110643493 - ECP_3342 - hypothetical protein 3277 48.49 0 3509719..3510681 - 320 110643494 - ECP_3343 - ribokinase family sugar kinase 3278 41.72 -1 3510703..3511692 - 329 110643495 - ECP_3344 - putative sugar uptake ABC transporter permease protein 3279 45.33 0 3511693..3513192 - 499 110643496 - ECP_3345 - putative sugar uptake ABC transporter ATP-binding protein 3280 43.88 -1 3513253..3514143 - 296 110643497 - ECP_3346 - putative sugar uptake ABC transporter periplasmic solute-binding protein 3281 48.19 0 3514179..3515033 - 284 110643498 gatY ECP_3347 - tagatose-bisphosphate aldolase 3282 48.01 0 3515375..3516205 + 276 110643499 - ECP_3348 - DeoR family regulatory protein 3283 49.01 0 3516216..3517172 + 318 110643500 - ECP_3349 - ribokinase family sugar kinase 3284 55.14 0 3517265..3517507 + 80 110643501 - ECP_3350 - hypothetical protein 3285 54.41 0 3517497..3518948 + 483 110643502 panF ECP_3351 - sodium/panthothenate symporter 3286 54.65 0 3518960..3519841 + 293 110643503 prmA ECP_3352 - ribosomal protein L11 methyltransferase 3287 51.97 0 3520170..3521135 + 321 110643504 - ECP_3353 - tRNA-dihydrouridine synthase B 3288 46.80 0 3521161..3521457 + 98 110643505 fis ECP_3354 - DNA-binding protein Fis 3289 48.14 0 3521543..3522427 + 294 110643506 - ECP_3355 - putative methyltransferase 3290 40.56 -1 3522511..3522690 + 59 110643507 - ECP_3356 - hypothetical protein 3291 43.44 -1 3522693..3523355 - 220 110643508 - ECP_3357 - DNA-binding transcriptional regulator EnvR 3292 34.29 -2 3523556..3523765 - 69 110643509 - ECP_3358 - hypothetical protein 3293 52.07 0 3523754..3524911 + 385 110643510 - ECP_3359 - acriflavine resistance protein E precursor 3294 51.01 0 3524923..3528027 + 1034 110643511 - ECP_3360 - acriflavine resistance protein F 3295 54.05 0 3528280..3528501 + 73 110643512 - ECP_3361 - hypothetical protein 3296 45.76 0 3528727..3528903 + 58 110643513 - ECP_3362 - hypothetical protein 3297 49.71 0 3528932..3529957 + 341 110643514 - ECP_3363 - putative amino-acid ABC transporter binding protein YhdW precursor 3298 50.08 0 3530025..3531206 + 393 110643515 - ECP_3364 - amino acid ABC transporter permease 3299 52.36 0 3531216..3532319 + 367 110643516 - ECP_3365 - amino acid ABC transporter permease 3300 47.30 0 3532327..3533085 + 252 110643517 - ECP_3366 - amino acid ABC transporter ATP-binding protein 3301 48.83 0 3538877..3539431 + 184 110643518 - ECP_3367 - putative transferase 3302 47.67 0 3539407..3539664 - 85 110643519 - ECP_3368 - hypothetical protein 3303 48.72 0 3539661..3540479 - 272 110643520 aroE ECP_3369 - shikimate 5-dehydrogenase 3304 52.43 0 3540484..3541101 - 205 110643521 - ECP_3370 - putative ribosome maturation factor 3305 50.28 0 3541061..3541603 - 180 110643522 - ECP_3371 - putative DNA topoisomerase 3306 45.78 0 3541632..3542105 - 157 110643523 - ECP_3372 - hypothetical protein 3307 50.84 0 3542077..3543201 - 374 110643524 - ECP_3373 - hypothetical protein 3308 46.67 0 3543331..3543840 + 169 110643525 def ECP_3374 - peptide deformylase 3309 51.58 0 3543855..3544802 + 315 110643526 fmt ECP_3375 - methionyl-tRNA formyltransferase 3310 50.23 0 3544854..3546143 + 429 110643527 - ECP_3376 - 16S rRNA methyltransferase B 3311 49.82 0 3546165..3547541 + 458 110643528 trkA ECP_3377 - potassium transporter peripheral membrane component 3312 44.44 -1 3547671..3548084 + 137 110643529 mscL ECP_3378 - large-conductance mechanosensitive channel 3313 42.92 -1 3548081..3548299 - 72 110643530 - ECP_3379 - hypothetical protein 3314 49.53 0 3548355..3548780 - 141 110643531 zntR ECP_3380 - zinc-responsive transcriptional regulator 3315 46.07 0 3548791..3549159 - 122 110643532 - ECP_3381 - hypothetical protein 3316 53.39 0 3549266..3549649 - 127 110643533 rplQ ECP_3382 - 50S ribosomal protein L17 3317 52.22 0 3549690..3550679 - 329 110643534 - ECP_3383 - DNA-directed RNA polymerase subunit alpha 3318 50.72 0 3550705..3551325 - 206 110643535 rpsD ECP_3384 - 30S ribosomal protein S4 3319 51.54 0 3551359..3551748 - 129 110643536 - ECP_3385 - 30S ribosomal protein S11 3320 51.82 0 3551765..3552121 - 118 110643537 rpsM ECP_3386 - 30S ribosomal protein S13 3321 47.86 0 3552268..3552384 - 38 110643538 rpmJ ECP_3387 - 50S ribosomal protein L36 3322 49.62 0 3552416..3553747 - 443 110643539 secY ECP_3388 - preprotein translocase subunit SecY 3323 53.56 0 3553755..3554189 - 144 110643540 rplO ECP_3389 - 50S ribosomal protein L15 3324 50.00 0 3554193..3554372 - 59 110643541 rpmD ECP_3390 - 50S ribosomal protein L30 3325 49.80 0 3554376..3554879 - 167 110643542 rpsE ECP_3391 - 30S ribosomal protein S5 3326 53.67 0 3554894..3555247 - 117 110643543 rplR ECP_3392 - 50S ribosomal protein L18 3327 52.06 0 3555257..3555790 - 177 110643544 rplF ECP_3393 - 50S ribosomal protein L6 3328 50.13 0 3555803..3556195 - 130 110643545 rpsH ECP_3394 - 30S ribosomal protein S8 3329 52.61 0 3556229..3556534 - 101 110643546 rpsN ECP_3395 - 30S ribosomal protein S14 3330 49.81 0 3556549..3557088 - 179 110643547 rplE ECP_3396 - 50S ribosomal protein L5 3331 45.71 0 3557103..3557417 - 104 110643548 rplX ECP_3397 - 50S ribosomal protein L24 3332 51.08 0 3557428..3557799 - 123 110643549 rplN ECP_3398 - 50S ribosomal protein L14 3333 47.45 0 3557964..3558218 - 84 110643550 rpsQ ECP_3399 - 30S ribosomal protein S17 3334 54.17 0 3558218..3558409 - 63 110643551 - ECP_3400 - 50S ribosomal protein L29 3335 51.58 0 3558409..3558819 - 136 110643552 rplP ECP_3401 - 50S ribosomal protein L16 50.53 MEAN 5.23 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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