version 1.0
Escherichia coli 536, complete genome - 1..4938920 4620 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3185 53.57 0 3415023..3416267 - 414 110643402 - ECP_3249 - tryptophan permease 3186 55.82 +1 3416421..3418310 - 629 110643403 - ECP_3250 - ATP-dependent RNA helicase DeaD 3187 48.36 0 3418490..3419374 - 294 110643404 - ECP_3251 - lipoprotein NlpI 3188 53.15 0 3419483..3421687 - 734 110643405 - ECP_3252 - polynucleotide phosphorylase/polyadenylase 3189 52.22 0 3421865..3422134 - 89 110643406 rpsO ECP_3253 - 30S ribosomal protein S15 3190 52.80 0 3422283..3423227 - 314 110643407 truB ECP_3254 - tRNA pseudouridine synthase B 3191 52.99 0 3423227..3423628 - 133 110643408 rbfA ECP_3255 - ribosome-binding factor A 3192 53.09 0 3423792..3426464 - 890 110643409 infB ECP_3256 - translation initiation factor IF-2 3193 52.55 0 3426489..3427976 - 495 110643410 nusA ECP_3257 - transcription elongation factor NusA 3194 48.79 0 3428004..3428456 - 150 110643411 - ECP_3258 - hypothetical protein 3195 52.38 0 3429087..3430430 + 447 110643412 - ECP_3259 - argininosuccinate synthase 3196 47.27 0 3430438..3431169 - 243 110643413 - ECP_3260 - hypothetical protein 3197 39.30 -2 3431268..3431954 - 228 110643414 - ECP_3261 - hypothetical protein 3198 49.85 0 3432620..3432952 - 110 110643415 secG ECP_3262 - preprotein translocase subunit SecG 3199 54.19 0 3433180..3434517 - 445 110643416 glmM ECP_3263 - phosphoglucosamine mutase 3200 51.24 0 3434510..3435358 - 282 110643417 folP ECP_3264 - dihydropteroate synthase 3201 53.39 0 3435448..3437382 - 644 110643418 hflB ECP_3265 - ATP-dependent metalloprotease 3202 50.63 0 3437482..3438111 - 209 110643419 rrmJ ECP_3266 - 23S rRNA methyltransferase J 3203 48.64 0 3438237..3438530 + 97 110643420 - ECP_3267 - RNA-binding protein YhbY 3204 48.64 0 3438686..3439162 - 158 110643421 greA ECP_3268 - transcription elongation factor GreA 3205 52.72 0 3439410..3440843 + 477 110643422 - ECP_3269 - D-alanyl-D-alanine carboxypeptidase/endopeptidase 3206 53.03 0 3440884..3442056 - 390 110643423 obgE ECP_3270 - GTPase ObgE 3207 52.59 0 3442072..3443037 - 321 110643424 - ECP_3271 - transport protein YhbE 3208 50.39 0 3443165..3443422 - 85 110643425 rpmA ECP_3272 - 50S ribosomal protein L27 3209 48.40 0 3443443..3443754 - 103 110643426 rplU ECP_3273 - 50S ribosomal protein L21 3210 52.67 0 3444013..3444984 + 323 110643427 - ECP_3274 - octaprenyl diphosphate synthase 3211 50.18 0 3445217..3445495 + 92 110643428 - ECP_3275 - DNA-binding transcriptional regulator Nlp 3212 53.33 0 3445543..3446802 - 419 110643429 - ECP_3276 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3213 50.37 0 3446857..3447126 - 89 110643430 - ECP_3277 - BolA family transcriptional regulator 3214 52.72 0 3447271..3447564 - 97 110643431 - ECP_3278 - hypothetical protein 3215 52.20 0 3447564..3448199 - 211 110643432 - ECP_3279 - hypothetical protein 3216 49.46 0 3448218..3448769 - 183 110643433 - ECP_3280 - hypothetical protein 3217 54.92 0 3448774..3449556 - 260 110643434 - ECP_3281 - hypothetical protein 3218 54.69 0 3449564..3450373 - 269 110643435 - ECP_3282 - putative ABC transporter ATP-binding protein YrbF 3219 51.67 0 3450583..3451269 + 228 110643436 - ECP_3283 - putative sodium/calcium exchanger protein 3220 51.85 0 3451344..3451559 + 71 110643437 - ECP_3284 - hypothetical protein 3221 52.18 0 3451573..3452559 + 328 110643438 - ECP_3285 - D-arabinose 5-phosphate isomerase 3222 52.56 0 3452580..3453146 + 188 110643439 - ECP_3286 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 3223 46.35 0 3453143..3453718 + 191 110643440 - ECP_3287 - hypothetical protein 3224 49.82 0 3453687..3454244 + 185 110643441 - ECP_3288 - hypothetical protein 3225 54.13 0 3454251..3454976 + 241 110643442 - ECP_3289 - putative ABC transporter ATP-binding protein YhbG 3226 52.44 0 3455024..3456457 + 477 110643443 - ECP_3290 - RNA polymerase factor sigma-54 3227 44.79 -1 3456480..3456767 + 95 110643444 - ECP_3291 - putative sigma(54) modulation protein 3228 51.83 0 3456885..3457376 + 163 110643445 - ECP_3292 - sugar-specific enzyme IIA component of PTS 3229 52.05 0 3457422..3458276 + 284 110643446 - ECP_3293 - hypothetical protein 3230 49.45 0 3458273..3458545 + 90 110643447 - ECP_3294 - phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) 3231 51.50 0 3458759..3459391 + 210 110643448 - ECP_3295 - hypothetical protein 3232 52.13 0 3459388..3460116 - 242 110643449 mtgA ECP_3296 - monofunctional biosynthetic peptidoglycan transglycosylase 3233 52.29 0 3460113..3460766 - 217 110643450 - ECP_3297 - isoprenoid biosynthesis protein 3234 50.62 0 3460996..3463332 - 778 110643451 - ECP_3298 - aerobic respiration control sensor protein ArcB 3235 56.13 +1 3463428..3464357 - 309 110643452 - ECP_3299 - hypothetical protein 3236 56.03 +1 3469506..3470924 + 472 110643453 gltD ECP_3302 - glutamate synthase subunit beta 3237 49.29 0 3471108..3472235 + 375 110643454 - ECP_3303 - hypothetical protein 3238 48.39 0 3472295..3472759 - 154 110643455 - ECP_3304 - hypothetical protein 3239 57.99 +1 3472756..3473631 - 291 110643456 - ECP_3305 - N-acetylmannosamine kinase 3240 58.41 +1 3473628..3474317 - 229 110643457 - ECP_3306 - N-acetylmannosamine-6-phosphate 2-epimerase 3241 55.26 0 3474365..3475855 - 496 110643458 - ECP_3307 - putative sialic acid transporter 3242 53.02 0 3475964..3476857 - 297 110643459 - ECP_3308 - N-acetylneuraminate lyase 3243 53.54 0 3476979..3477770 - 263 110643460 - ECP_3309 - transcriptional regulator NanR 3244 55.22 0 3477878..3478375 - 165 110643461 - ECP_3310 - ClpXP protease specificity-enhancing factor 3245 53.68 0 3478381..3479019 - 212 110643462 sspA ECP_3311 - stringent starvation protein A 3246 44.76 -1 3478961..3479170 + 69 110643463 - ECP_3312 - hypothetical protein 3247 52.16 0 3479414..3479806 - 130 110643464 rpsI ECP_3313 - 30S ribosomal protein S9 3248 50.58 0 3479822..3480250 - 142 110643465 rplM ECP_3314 - 50S ribosomal protein L13 3249 51.68 0 3480470..3481597 - 375 110643466 - ECP_3315 - putative ATPase 3250 54.39 0 3481791..3482189 + 132 110643467 - ECP_3316 - cytochrome d ubiquinol oxidase subunit III 3251 52.27 0 3482343..3483710 + 455 110643468 - ECP_3317 - serine endoprotease 3252 52.81 0 3483800..3484867 + 355 110643469 - ECP_3318 - serine endoprotease 3253 51.65 0 3484930..3485868 - 312 110643470 - ECP_3319 - malate dehydrogenase 3254 40.80 -1 3486146..3486319 + 57 110643471 - ECP_3320 - hypothetical protein 3255 48.20 0 3486303..3486773 + 156 110643472 - ECP_3321 - arginine repressor 3256 48.48 0 3487137..3487400 + 87 110643473 - ECP_3322 - hypothetical protein 3257 42.86 -1 3487455..3487727 - 90 110643474 - ECP_3323 - hypothetical protein 3258 51.47 0 3487819..3489786 - 655 110643475 - ECP_3324 - p-hydroxybenzoic acid efflux subunit AaeB 3259 53.27 0 3489792..3490724 - 310 110643476 - ECP_3325 - p-hydroxybenzoic acid efflux subunit AaeA 3260 47.55 0 3490732..3490935 - 67 110643477 - ECP_3326 - hypothetical protein 3261 52.15 0 3491118..3492047 + 309 110643478 - ECP_3327 - putative DNA-binding transcriptional regulator 3262 54.22 0 3492175..3493620 - 481 110643479 - ECP_3328 - protease TldD 3263 53.33 0 3493776..3497576 - 1266 110643480 - ECP_3329 - hypothetical protein 3264 52.18 0 3497644..3499113 - 489 110643481 - ECP_3330 - ribonuclease G 3265 54.04 0 3499103..3499696 - 197 110643482 - ECP_3331 - Maf-like protein 3266 51.53 0 3499705..3500193 - 162 110643483 - ECP_3332 - rod shape-determining protein MreD 3267 55.71 0 3500193..3501296 - 367 110643484 - ECP_3333 - cell wall structural complex MreBCD transmembrane component MreC 3268 54.21 0 3501362..3502405 - 347 110643485 - ECP_3334 - rod shape-determining protein MreB 3269 48.68 0 3502513..3502701 + 62 110643486 - ECP_3335 - hypothetical protein 3270 50.28 0 3502710..3504650 - 646 110643487 - ECP_3336 - regulatory protein CsrD 3271 55.28 0 3504802..3505776 + 324 110643488 - ECP_3337 - zinc-binding dehydrogenase 3272 40.61 -1 3505813..3505977 + 54 110643489 - ECP_3338 - hypothetical protein 3273 47.27 0 3506185..3506349 + 54 110643490 - ECP_3339 - hypothetical protein 3274 51.80 0 3506754..3507224 + 156 110643491 - ECP_3340 - acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 3275 53.04 0 3507235..3508584 + 449 110643492 - ECP_3341 - acetyl-CoA carboxylase biotin carboxylase subunit 3276 50.43 0 3508676..3509722 - 348 110643493 - ECP_3342 - hypothetical protein 3277 48.49 0 3509719..3510681 - 320 110643494 - ECP_3343 - ribokinase family sugar kinase 3278 41.72 -1 3510703..3511692 - 329 110643495 - ECP_3344 - putative sugar uptake ABC transporter permease protein 3279 45.33 0 3511693..3513192 - 499 110643496 - ECP_3345 - putative sugar uptake ABC transporter ATP-binding protein 3280 43.88 -1 3513253..3514143 - 296 110643497 - ECP_3346 - putative sugar uptake ABC transporter periplasmic solute-binding protein 3281 48.19 0 3514179..3515033 - 284 110643498 gatY ECP_3347 - tagatose-bisphosphate aldolase 3282 48.01 0 3515375..3516205 + 276 110643499 - ECP_3348 - DeoR family regulatory protein 3283 49.01 0 3516216..3517172 + 318 110643500 - ECP_3349 - ribokinase family sugar kinase 3284 55.14 0 3517265..3517507 + 80 110643501 - ECP_3350 - hypothetical protein 50.53 MEAN 5.23 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0