version 1.0
Escherichia coli 536, complete genome - 1..4938920 4620 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3126 50.58 0 3362935..3363711 + 258 110643343 - ECP_3190 - DNA-binding transcriptional repressor ExuR 3127 50.83 0 3364056..3364718 + 220 110643344 - ECP_3191 - DedA family, membrane protein 3128 54.17 0 3364722..3365105 + 127 110643345 - ECP_3192 - hypothetical protein 3129 47.92 0 3365237..3365620 + 127 110643346 - ECP_3193 - hypothetical protein 3130 53.92 0 3365658..3365963 + 101 110643347 - ECP_3194 - hypothetical protein 3131 54.57 0 3365966..3366370 + 134 110643348 - ECP_3195 - hypothetical protein 3132 56.00 +1 3366360..3366659 + 99 110643349 - ECP_3196 - hypothetical protein 3133 48.09 0 3366846..3367238 + 130 110643350 - ECP_3197 - hypothetical protein 3134 51.77 0 3367308..3368294 + 328 110643351 - ECP_3198 - putative glutathione S-transferase 3135 51.22 0 3368577..3368945 + 122 110643352 - ECP_3199 - hypothetical protein 3136 55.96 +1 3368979..3369875 - 298 110643353 - ECP_3200 - LysR family transcriptional regulator 3137 52.71 0 3369980..3370681 + 233 110643354 - ECP_3201 - hypothetical protein 3138 51.52 0 3370704..3370868 + 54 110643355 - ECP_3202 - hypothetical protein 3139 55.91 +1 3370929..3372239 - 436 110643356 - ECP_3203 - hypothetical protein 3140 50.60 0 3372267..3373598 - 443 110643357 - ECP_3204 - hypothetical protein 3141 53.26 0 3373876..3375240 - 454 110643358 - ECP_3205 - L-serine dehydratase tdcG 3142 52.05 0 3375312..3375701 - 129 110643359 - ECP_3206 - hypothetical protein 3143 52.68 0 3375715..3378009 - 764 110643360 - ECP_3207 - keto-acid formate acetyltransferase 3144 48.08 0 3378043..3379263 - 406 162138275 - ECP_3208 - propionate/acetate kinase 3145 48.95 0 3379277..3380608 - 443 110643362 - ECP_3209 - threonine/serine transporter TdcC 3146 46.06 0 3380630..3381619 - 329 110643363 - ECP_3210 - threonine dehydratase 3147 42.28 -1 3381718..3382656 - 312 110643364 - ECP_3211 - DNA-binding transcriptional activator TdcA 3148 30.72 -2 3382845..3383189 + 114 110643365 - ECP_3212 - DNA-binding transcriptional activator TdcR 3149 61.11 +2 3383778..3384227 + 149 110643366 - ECP_3213 - hypothetical protein 3150 53.71 0 3384155..3385381 - 408 110643367 - ECP_3214 - glycerate kinase I 3151 53.33 0 3385397..3386296 - 299 110643368 garR ECP_3215 - tartronate semialdehyde reductase 3152 52.40 0 3386317..3387087 - 256 110643369 - ECP_3216 - alpha-dehydro-beta-deoxy-D-glucarate aldolase 3153 51.31 0 3387103..3388437 - 444 110643370 - ECP_3217 - galactarate transporter 3154 52.48 0 3388812..3390383 + 523 110643371 - ECP_3218 - D-galactarate dehydratase 3155 47.62 0 3390532..3390867 + 111 110643372 - ECP_3219 - putative regulator PrlF 3156 44.30 -1 3390867..3391331 + 154 110643373 - ECP_3220 - hypothetical protein 3157 51.85 0 3391386..3392195 - 269 110643374 - ECP_3221 - DNA-binding transcriptional regulator AgaR 3158 55.35 0 3392444..3393724 + 426 110643375 - ECP_3222 - putative tagatose 6-phosphate kinase agaZ 3159 50.63 0 3393747..3394220 + 157 110643376 - ECP_3223 - N-acetylgalactosamine-specific PTS system transporter subunit IIB 3160 56.03 +1 3394231..3395010 + 259 110643377 - ECP_3224 - putative phosphotransferase system enzyme subunit (AgaW) 3161 52.62 0 3395000..3395896 + 298 110643378 - ECP_3225 - PTS system, N-acetylgalactosamine-specific IID component (AgaE) 3162 54.10 0 3395943..3396332 + 129 110643379 - ECP_3226 - putative phosphotransferase system enzyme subunit (AgaF) 3163 58.02 +1 3396329..3397462 + 377 110643380 - ECP_3227 - putative N-acetylgalctosamine-6-phosphate deacetylase 3164 56.19 +1 3397812..3398966 + 384 110643381 - ECP_3228 - putative tagatose-6-phosphate ketose/aldose isomerase 3165 52.61 0 3398979..3399839 + 286 110643382 kbaY ECP_3229 - tagatose-bisphosphate aldolase 3166 43.82 -1 3400006..3400482 + 158 110643383 - ECP_3230 - N-acetylgalactosamine-specific PTS system transporter subunit IIB 3167 50.87 0 3400521..3401324 + 267 110643384 - ECP_3231 - N-acetylgalactosamine-specific PTS system transporter subunit IIC 3168 48.99 0 3401314..3402105 + 263 110643385 - ECP_3232 - N-acetylgalactosamine-specific PTS system transporter subunit IID 3169 50.26 0 3402106..3402873 + 255 110643386 - ECP_3233 - galactosamine-6-phosphate isomerase 3170 53.82 0 3402923..3403786 - 287 110643387 - ECP_3234 - putative tetrapyrrole methylase 3171 54.49 0 3403851..3405887 + 678 110643388 - ECP_3235 - hypothetical protein 3172 54.55 0 3405845..3406240 + 131 110643389 - ECP_3236 - hypothetical protein 3173 49.92 0 3406260..3406850 + 196 110643390 - ECP_3237 - DnaA initiator-associating protein DiaA 3174 53.99 0 3406860..3407435 + 191 110643391 - ECP_3238 - hypothetical protein 3175 57.35 +1 3407548..3408588 - 346 110643392 - ECP_3239 - hypothetical protein 3176 55.35 0 3408661..3409296 - 211 110643393 - ECP_3240 - hypothetical protein 3177 50.48 0 3409424..3409942 + 172 110643394 - ECP_3241 - hypothetical protein 3178 53.83 0 3409922..3410365 - 147 110643395 - ECP_3242 - hypothetical protein 3179 54.13 0 3410416..3410718 + 100 110643396 - ECP_3243 - GIY-YIG nuclease superfamily protein 3180 55.16 0 3410705..3411208 - 167 110643397 - ECP_3244 - acetyltransferase YhbS 3181 51.18 0 3411202..3411750 - 182 110643398 - ECP_3245 - hypothetical protein 3182 57.23 +1 3411935..3412930 + 331 110643399 - ECP_3246 - putative protease YhbU precursor 3183 55.86 +1 3412939..3413817 + 292 110643400 - ECP_3247 - peptidase YhbV 3184 57.14 +1 3413898..3414905 + 335 110643401 - ECP_3248 - hypothetical protein 3185 53.57 0 3415023..3416267 - 414 110643402 - ECP_3249 - tryptophan permease 3186 55.82 +1 3416421..3418310 - 629 110643403 - ECP_3250 - ATP-dependent RNA helicase DeaD 3187 48.36 0 3418490..3419374 - 294 110643404 - ECP_3251 - lipoprotein NlpI 3188 53.15 0 3419483..3421687 - 734 110643405 - ECP_3252 - polynucleotide phosphorylase/polyadenylase 3189 52.22 0 3421865..3422134 - 89 110643406 rpsO ECP_3253 - 30S ribosomal protein S15 3190 52.80 0 3422283..3423227 - 314 110643407 truB ECP_3254 - tRNA pseudouridine synthase B 3191 52.99 0 3423227..3423628 - 133 110643408 rbfA ECP_3255 - ribosome-binding factor A 3192 53.09 0 3423792..3426464 - 890 110643409 infB ECP_3256 - translation initiation factor IF-2 3193 52.55 0 3426489..3427976 - 495 110643410 nusA ECP_3257 - transcription elongation factor NusA 3194 48.79 0 3428004..3428456 - 150 110643411 - ECP_3258 - hypothetical protein 3195 52.38 0 3429087..3430430 + 447 110643412 - ECP_3259 - argininosuccinate synthase 3196 47.27 0 3430438..3431169 - 243 110643413 - ECP_3260 - hypothetical protein 3197 39.30 -2 3431268..3431954 - 228 110643414 - ECP_3261 - hypothetical protein 3198 49.85 0 3432620..3432952 - 110 110643415 secG ECP_3262 - preprotein translocase subunit SecG 3199 54.19 0 3433180..3434517 - 445 110643416 glmM ECP_3263 - phosphoglucosamine mutase 3200 51.24 0 3434510..3435358 - 282 110643417 folP ECP_3264 - dihydropteroate synthase 3201 53.39 0 3435448..3437382 - 644 110643418 hflB ECP_3265 - ATP-dependent metalloprotease 3202 50.63 0 3437482..3438111 - 209 110643419 rrmJ ECP_3266 - 23S rRNA methyltransferase J 3203 48.64 0 3438237..3438530 + 97 110643420 - ECP_3267 - RNA-binding protein YhbY 3204 48.64 0 3438686..3439162 - 158 110643421 greA ECP_3268 - transcription elongation factor GreA 3205 52.72 0 3439410..3440843 + 477 110643422 - ECP_3269 - D-alanyl-D-alanine carboxypeptidase/endopeptidase 3206 53.03 0 3440884..3442056 - 390 110643423 obgE ECP_3270 - GTPase ObgE 3207 52.59 0 3442072..3443037 - 321 110643424 - ECP_3271 - transport protein YhbE 3208 50.39 0 3443165..3443422 - 85 110643425 rpmA ECP_3272 - 50S ribosomal protein L27 3209 48.40 0 3443443..3443754 - 103 110643426 rplU ECP_3273 - 50S ribosomal protein L21 3210 52.67 0 3444013..3444984 + 323 110643427 - ECP_3274 - octaprenyl diphosphate synthase 3211 50.18 0 3445217..3445495 + 92 110643428 - ECP_3275 - DNA-binding transcriptional regulator Nlp 3212 53.33 0 3445543..3446802 - 419 110643429 - ECP_3276 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3213 50.37 0 3446857..3447126 - 89 110643430 - ECP_3277 - BolA family transcriptional regulator 3214 52.72 0 3447271..3447564 - 97 110643431 - ECP_3278 - hypothetical protein 3215 52.20 0 3447564..3448199 - 211 110643432 - ECP_3279 - hypothetical protein 3216 49.46 0 3448218..3448769 - 183 110643433 - ECP_3280 - hypothetical protein 3217 54.92 0 3448774..3449556 - 260 110643434 - ECP_3281 - hypothetical protein 3218 54.69 0 3449564..3450373 - 269 110643435 - ECP_3282 - putative ABC transporter ATP-binding protein YrbF 3219 51.67 0 3450583..3451269 + 228 110643436 - ECP_3283 - putative sodium/calcium exchanger protein 3220 51.85 0 3451344..3451559 + 71 110643437 - ECP_3284 - hypothetical protein 3221 52.18 0 3451573..3452559 + 328 110643438 - ECP_3285 - D-arabinose 5-phosphate isomerase 3222 52.56 0 3452580..3453146 + 188 110643439 - ECP_3286 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 3223 46.35 0 3453143..3453718 + 191 110643440 - ECP_3287 - hypothetical protein 3224 49.82 0 3453687..3454244 + 185 110643441 - ECP_3288 - hypothetical protein 3225 54.13 0 3454251..3454976 + 241 110643442 - ECP_3289 - putative ABC transporter ATP-binding protein YhbG 50.53 MEAN 5.23 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0