version 1.0
Escherichia coli 536, complete genome - 1..4938920 4620 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3093 52.12 0 3322793..3324538 + 581 110643310 dnaG ECP_3156 - DNA primase 3094 53.09 0 3324733..3326574 + 613 110643311 - ECP_3157 - RNA polymerase sigma factor RpoD 3095 53.65 0 3326653..3327159 - 168 110643312 - ECP_3158 - G/U mismatch-specific DNA glycosylase 3096 56.99 +1 3327413..3328177 - 254 110643313 - ECP_3160 - hypothetical protein 3097 53.21 0 3328465..3329088 + 207 110643314 - ECP_3161 - hypothetical protein 3098 54.90 0 3329117..3330637 - 506 110643315 - ECP_3162 - aerotaxis receptor 3099 54.53 0 3330944..3332434 + 496 110643316 - ECP_3163 - putrescine--2-oxoglutarate aminotransferase 3100 51.35 0 3332476..3332808 - 110 110643317 - ECP_3164 - hypothetical protein 3101 45.36 0 3332915..3333097 + 60 110643318 - ECP_3165 - hypothetical protein 3102 51.73 0 3333027..3334010 + 327 110643319 - ECP_3166 - DNA-binding transcriptional repressor EbgR 3103 54.06 0 3334194..3337286 + 1030 110643320 ebgA ECP_3167 - cryptic beta-D-galactosidase subunit alpha 3104 45.56 0 3337283..3337732 + 149 110643321 ebgC ECP_3168 - cryptic beta-D-galactosidase subunit beta 3105 49.65 0 3337795..3339228 + 477 110643322 - ECP_3169 - transporter YgjI 3106 52.01 0 3339362..3340432 + 356 110643323 - ECP_3170 - hypothetical protein 3107 54.46 0 3340449..3342800 + 783 110643324 - ECP_3171 - putative glycosyl hydrolase 3108 56.91 +1 3342971..3344989 + 672 110643325 - ECP_3172 - 2,4-dienoyl-CoA reductase 3109 47.96 0 3345082..3345498 - 138 110643326 - ECP_3173 - hypothetical protein 3110 40.35 -1 3345495..3345665 - 56 110643327 - ECP_3174 - hypothetical protein 3111 53.65 0 3345769..3346905 - 378 110643328 - ECP_3175 - putative ribosomal RNA small subunit methyltransferase D 3112 52.38 0 3346990..3347493 + 167 110643329 - ECP_3176 - hypothetical protein 3113 50.00 0 3347570..3348253 + 227 110643330 - ECP_3177 - hypothetical protein 3114 51.67 0 3348332..3349318 + 328 110643331 - ECP_3178 - oxidoreductase YgjR 3115 53.62 0 3349601..3350566 + 321 110643332 - ECP_3179 - hypothetical protein 3116 54.86 0 3350890..3352134 + 414 110643333 - ECP_3180 - serine/threonine transporter SstT 3117 50.72 0 3352138..3352689 - 183 110643334 - ECP_3181 - hypothetical protein 3118 53.56 0 3352772..3354259 - 495 110643335 - ECP_3182 - altronate hydrolase 3119 53.64 0 3354274..3355686 - 470 110643336 - ECP_3183 - glucuronate isomerase 3120 54.43 0 3356169..3357467 + 432 110643337 - ECP_3184 - hexuronate transporter 3121 47.92 0 3357543..3358625 - 360 110643338 - ECP_3185 - putative minor pilin protein 3122 47.55 0 3358622..3361006 - 794 110643339 - ECP_3186 - putative usher protein 3123 41.67 -1 3360966..3361325 - 119 110643340 - ECP_3187 - hypothetical protein 3124 46.91 0 3361398..3361898 - 166 110643341 - ECP_3188 - putative CS1 type fimbrial major subunit 3125 39.61 -2 3361928..3362644 - 238 110643342 - ECP_3189 - putative fimbrial protein 3126 50.58 0 3362935..3363711 + 258 110643343 - ECP_3190 - DNA-binding transcriptional repressor ExuR 3127 50.83 0 3364056..3364718 + 220 110643344 - ECP_3191 - DedA family, membrane protein 3128 54.17 0 3364722..3365105 + 127 110643345 - ECP_3192 - hypothetical protein 3129 47.92 0 3365237..3365620 + 127 110643346 - ECP_3193 - hypothetical protein 3130 53.92 0 3365658..3365963 + 101 110643347 - ECP_3194 - hypothetical protein 3131 54.57 0 3365966..3366370 + 134 110643348 - ECP_3195 - hypothetical protein 3132 56.00 +1 3366360..3366659 + 99 110643349 - ECP_3196 - hypothetical protein 3133 48.09 0 3366846..3367238 + 130 110643350 - ECP_3197 - hypothetical protein 3134 51.77 0 3367308..3368294 + 328 110643351 - ECP_3198 - putative glutathione S-transferase 3135 51.22 0 3368577..3368945 + 122 110643352 - ECP_3199 - hypothetical protein 3136 55.96 +1 3368979..3369875 - 298 110643353 - ECP_3200 - LysR family transcriptional regulator 3137 52.71 0 3369980..3370681 + 233 110643354 - ECP_3201 - hypothetical protein 3138 51.52 0 3370704..3370868 + 54 110643355 - ECP_3202 - hypothetical protein 3139 55.91 +1 3370929..3372239 - 436 110643356 - ECP_3203 - hypothetical protein 3140 50.60 0 3372267..3373598 - 443 110643357 - ECP_3204 - hypothetical protein 3141 53.26 0 3373876..3375240 - 454 110643358 - ECP_3205 - L-serine dehydratase tdcG 3142 52.05 0 3375312..3375701 - 129 110643359 - ECP_3206 - hypothetical protein 3143 52.68 0 3375715..3378009 - 764 110643360 - ECP_3207 - keto-acid formate acetyltransferase 3144 48.08 0 3378043..3379263 - 406 162138275 - ECP_3208 - propionate/acetate kinase 3145 48.95 0 3379277..3380608 - 443 110643362 - ECP_3209 - threonine/serine transporter TdcC 3146 46.06 0 3380630..3381619 - 329 110643363 - ECP_3210 - threonine dehydratase 3147 42.28 -1 3381718..3382656 - 312 110643364 - ECP_3211 - DNA-binding transcriptional activator TdcA 3148 30.72 -2 3382845..3383189 + 114 110643365 - ECP_3212 - DNA-binding transcriptional activator TdcR 3149 61.11 +2 3383778..3384227 + 149 110643366 - ECP_3213 - hypothetical protein 3150 53.71 0 3384155..3385381 - 408 110643367 - ECP_3214 - glycerate kinase I 3151 53.33 0 3385397..3386296 - 299 110643368 garR ECP_3215 - tartronate semialdehyde reductase 3152 52.40 0 3386317..3387087 - 256 110643369 - ECP_3216 - alpha-dehydro-beta-deoxy-D-glucarate aldolase 3153 51.31 0 3387103..3388437 - 444 110643370 - ECP_3217 - galactarate transporter 3154 52.48 0 3388812..3390383 + 523 110643371 - ECP_3218 - D-galactarate dehydratase 3155 47.62 0 3390532..3390867 + 111 110643372 - ECP_3219 - putative regulator PrlF 3156 44.30 -1 3390867..3391331 + 154 110643373 - ECP_3220 - hypothetical protein 3157 51.85 0 3391386..3392195 - 269 110643374 - ECP_3221 - DNA-binding transcriptional regulator AgaR 3158 55.35 0 3392444..3393724 + 426 110643375 - ECP_3222 - putative tagatose 6-phosphate kinase agaZ 3159 50.63 0 3393747..3394220 + 157 110643376 - ECP_3223 - N-acetylgalactosamine-specific PTS system transporter subunit IIB 3160 56.03 +1 3394231..3395010 + 259 110643377 - ECP_3224 - putative phosphotransferase system enzyme subunit (AgaW) 3161 52.62 0 3395000..3395896 + 298 110643378 - ECP_3225 - PTS system, N-acetylgalactosamine-specific IID component (AgaE) 3162 54.10 0 3395943..3396332 + 129 110643379 - ECP_3226 - putative phosphotransferase system enzyme subunit (AgaF) 3163 58.02 +1 3396329..3397462 + 377 110643380 - ECP_3227 - putative N-acetylgalctosamine-6-phosphate deacetylase 3164 56.19 +1 3397812..3398966 + 384 110643381 - ECP_3228 - putative tagatose-6-phosphate ketose/aldose isomerase 3165 52.61 0 3398979..3399839 + 286 110643382 kbaY ECP_3229 - tagatose-bisphosphate aldolase 3166 43.82 -1 3400006..3400482 + 158 110643383 - ECP_3230 - N-acetylgalactosamine-specific PTS system transporter subunit IIB 3167 50.87 0 3400521..3401324 + 267 110643384 - ECP_3231 - N-acetylgalactosamine-specific PTS system transporter subunit IIC 3168 48.99 0 3401314..3402105 + 263 110643385 - ECP_3232 - N-acetylgalactosamine-specific PTS system transporter subunit IID 3169 50.26 0 3402106..3402873 + 255 110643386 - ECP_3233 - galactosamine-6-phosphate isomerase 3170 53.82 0 3402923..3403786 - 287 110643387 - ECP_3234 - putative tetrapyrrole methylase 3171 54.49 0 3403851..3405887 + 678 110643388 - ECP_3235 - hypothetical protein 3172 54.55 0 3405845..3406240 + 131 110643389 - ECP_3236 - hypothetical protein 3173 49.92 0 3406260..3406850 + 196 110643390 - ECP_3237 - DnaA initiator-associating protein DiaA 3174 53.99 0 3406860..3407435 + 191 110643391 - ECP_3238 - hypothetical protein 3175 57.35 +1 3407548..3408588 - 346 110643392 - ECP_3239 - hypothetical protein 3176 55.35 0 3408661..3409296 - 211 110643393 - ECP_3240 - hypothetical protein 3177 50.48 0 3409424..3409942 + 172 110643394 - ECP_3241 - hypothetical protein 3178 53.83 0 3409922..3410365 - 147 110643395 - ECP_3242 - hypothetical protein 3179 54.13 0 3410416..3410718 + 100 110643396 - ECP_3243 - GIY-YIG nuclease superfamily protein 3180 55.16 0 3410705..3411208 - 167 110643397 - ECP_3244 - acetyltransferase YhbS 3181 51.18 0 3411202..3411750 - 182 110643398 - ECP_3245 - hypothetical protein 3182 57.23 +1 3411935..3412930 + 331 110643399 - ECP_3246 - putative protease YhbU precursor 3183 55.86 +1 3412939..3413817 + 292 110643400 - ECP_3247 - peptidase YhbV 3184 57.14 +1 3413898..3414905 + 335 110643401 - ECP_3248 - hypothetical protein 3185 53.57 0 3415023..3416267 - 414 110643402 - ECP_3249 - tryptophan permease 3186 55.82 +1 3416421..3418310 - 629 110643403 - ECP_3250 - ATP-dependent RNA helicase DeaD 3187 48.36 0 3418490..3419374 - 294 110643404 - ECP_3251 - lipoprotein NlpI 3188 53.15 0 3419483..3421687 - 734 110643405 - ECP_3252 - polynucleotide phosphorylase/polyadenylase 3189 52.22 0 3421865..3422134 - 89 110643406 rpsO ECP_3253 - 30S ribosomal protein S15 3190 52.80 0 3422283..3423227 - 314 110643407 truB ECP_3254 - tRNA pseudouridine synthase B 3191 52.99 0 3423227..3423628 - 133 110643408 rbfA ECP_3255 - ribosome-binding factor A 3192 53.09 0 3423792..3426464 - 890 110643409 infB ECP_3256 - translation initiation factor IF-2 50.53 MEAN 5.23 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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