version 1.0
Escherichia coli 536, complete genome - 1..4938920 4620 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2480 53.58 0 2670938..2671426 - 162 110642696 - ECP_2536 - DNA-binding transcriptional regulator IscR 2481 54.66 0 2671696..2672436 - 246 110642697 - ECP_2537 - tRNA/rRNA methyltransferase YfhQ 2482 54.35 0 2672555..2673358 + 267 110642698 - ECP_2538 - inositol monophosphatase 2483 50.64 0 2673503..2674357 + 284 110642699 - ECP_2539 - hypothetical protein 2484 51.68 0 2674548..2675828 + 426 110642700 - ECP_2540 - stationary phase inducible protein CsiE 2485 56.84 +1 2675820..2676959 - 379 110642701 - ECP_2541 - putative 3-phenylpropionic acid transporter 2486 48.70 0 2677328..2677750 + 140 110642702 - ECP_2542 - hypothetical protein 2487 46.36 0 2677825..2678346 + 173 110642703 - ECP_2543 - IS putative transposase 2488 49.09 0 2678571..2679173 + 200 110642704 - ECP_2544 - IS putative transposase 2489 54.75 0 2679346..2680218 - 290 110642705 - ECP_2545 - hypothetical protein 2490 53.52 0 2680230..2681324 - 364 110642706 - ECP_2546 - zinc-type alcohol dehydrogenase-like protein YphC 2491 55.26 0 2681357..2682355 - 332 110642707 - ECP_2547 - ABC transporter permease 2492 55.82 +1 2682380..2683891 - 503 110642708 - ECP_2548 - ABC transporter ATP-binding protein 2493 45.73 0 2683914..2684897 - 327 110642709 - ECP_2549 - ABC transporter periplasmic binding protein YphF precursor 2494 55.06 0 2684994..2688275 - 1093 110642710 - ECP_2550 - hypothetical protein 2495 51.17 0 2688393..2689586 + 397 110642711 - ECP_2551 - hypothetical protein 2496 52.71 0 2689650..2690903 - 417 110642712 glyA ECP_2552 - serine hydroxymethyltransferase 2497 36.72 -2 2691007..2691183 + 58 110642713 - ECP_2553 - hypothetical protein 2498 52.56 0 2691232..2692422 + 396 110642714 - ECP_2554 - nitric oxide dioxygenase 2499 49.85 0 2692467..2692805 - 112 110642715 - ECP_2555 - nitrogen regulatory protein P-II 1 2500 55.06 0 2692866..2694200 - 444 110642716 - ECP_2556 - hypothetical protein 2501 54.76 0 2694190..2694903 - 237 110642717 - ECP_2557 - hypothetical protein 2502 52.85 0 2695068..2696558 - 496 110642718 - ECP_2558 - putative sensor-like histidine kinase YfhK 2503 56.58 +1 2697071..2700958 - 1295 110642719 - ECP_2559 - phosphoribosylformylglycinamidine synthase 2504 50.48 0 2701216..2702772 + 518 110642720 - ECP_2560 - putative transglycosylase 2505 52.89 0 2702769..2703305 - 178 110642721 - ECP_2561 - tRNA-specific adenosine deaminase 2506 52.67 0 2703330..2703965 - 211 110642722 - ECP_2562 - hypothetical protein 2507 51.71 0 2704174..2705022 + 282 110642723 - ECP_2563 - putative DNA-binding transcriptional regulator 2508 44.83 -1 2705078..2705338 + 86 110642724 - ECP_2564 - putative ferredoxin-like protein YfhL 2509 49.87 0 2706033..2706413 - 126 110642725 acpS ECP_2565 - 4'-phosphopantetheinyl transferase 2510 55.74 0 2706413..2707144 - 243 110642726 - ECP_2566 - pyridoxal phosphate biosynthetic protein PdxJ 2511 54.05 0 2707156..2707884 - 242 110642727 recO ECP_2567 - DNA repair protein RecO 2512 51.99 0 2707896..2708801 - 301 110642728 era ECP_2568 - GTP-binding protein Era 2513 51.25 0 2708798..2709478 - 226 110642729 rnc ECP_2569 - ribonuclease III 2514 51.49 0 2709745..2710719 - 324 110642730 - ECP_2570 - lsignal peptidase I 2515 53.17 0 2710735..2712534 - 599 110642731 - ECP_2571 - GTP-binding protein LepA 2516 55.21 0 2712732..2713211 - 159 110642732 - ECP_2572 - SoxR reducing system protein RseC 2517 51.31 0 2713208..2714164 - 318 110642733 rseB ECP_2573 - periplasmic negative regulator of sigmaE 2518 51.46 0 2714164..2714814 - 216 110642734 - ECP_2574 - anti-RNA polymerase sigma factor SigE 2519 48.78 0 2714847..2715422 - 191 110642735 - ECP_2575 - RNA polymerase sigma factor RpoE 2520 52.99 0 2715830..2717452 + 540 110642736 - ECP_2576 - L-aspartate oxidase 2521 52.17 0 2717437..2718174 - 245 110642737 - ECP_2577 - hypothetical protein 2522 54.61 0 2718306..2719640 + 444 110642738 - ECP_2578 - ATP-dependent RNA helicase SrmB 2523 49.43 0 2719673..2720554 - 293 110642739 - ECP_2579 - transcriptional regulator YfiE 2524 51.02 0 2720657..2721244 + 195 110642740 - ECP_2580 - neutral amino-acid efflux protein 2525 48.18 0 2721300..2721683 - 127 110642741 - ECP_2581 - autonomous glycyl radical cofactor GrcA 2526 52.61 0 2721988..2722677 + 229 110642742 - ECP_2582 - uracil-DNA glycosylase 2527 56.36 +1 2722725..2723762 - 345 110642743 - ECP_2583 - putative methyltransferase 2528 50.24 0 2723969..2724388 + 139 110642744 - ECP_2584 - thioredoxin 2 2529 51.31 0 2724433..2725155 + 240 110642745 - ECP_2585 - putative cytoplasmic protein 2530 54.15 0 2725187..2727847 + 886 110642746 - ECP_2586 - hypothetical protein 2531 49.04 0 2727961..2729316 + 451 110642747 pssA ECP_2587 - phosphatidylserine synthase 2532 53.40 0 2729362..2729685 + 107 110642748 - ECP_2588 - hypothetical protein 2533 47.56 0 2729682..2731073 - 463 110642749 - ECP_2589 - alpha-ketoglutarate transporter 2534 55.25 0 2731323..2731541 - 72 110642750 - ECP_2590 - putative transposase 2535 55.26 0 2731637..2731969 - 110 110642751 - ECP_2591 - putative transposase 2536 51.11 0 2731885..2732289 - 134 110642752 - ECP_2592 - putative transposase 2537 49.09 0 2732533..2733135 - 200 110642753 - ECP_2593 - IS putative transposase 2538 46.17 0 2733360..2733881 - 173 110642754 - ECP_2594 - IS putative transposase 2539 51.17 0 2739465..2742038 - 857 110642755 - ECP_2595 - protein disaggregation chaperone 2540 53.69 0 2742168..2742899 - 243 110642756 - ECP_2596 - hypothetical protein 2541 52.91 0 2742896..2743876 - 326 110642757 rluD ECP_2597 - 23S rRNA pseudouridine synthase D 2542 50.54 0 2744011..2744748 + 245 110642758 - ECP_2598 - outer membrane protein assembly complex subunit YfiO 2543 46.20 0 2745018..2745359 + 113 110642759 - ECP_2599 - translation inhibitor protein RaiA 2544 48.75 0 2745609..2746769 + 386 110642760 pheA ECP_2600 - bifunctional chorismate mutase/prephenate dehydratase 2545 52.14 0 2746812..2747933 - 373 110642761 tyrA ECP_2601 - bifunctional chorismate mutase/prephenate dehydrogenase 2546 51.54 0 2747944..2749014 - 356 110642762 - ECP_2602 - phospho-2-dehydro-3-deoxyheptonate aldolase 2547 44.81 -1 2749224..2749589 + 121 110642763 - ECP_2603 - hypothetical protein 2548 44.32 -1 2749738..2750256 + 172 110642764 - ECP_2604 - hypothetical protein 2549 48.33 0 2750246..2751472 + 408 110642765 - ECP_2605 - hypothetical protein 2550 51.14 0 2751488..2751970 + 160 110642766 - ECP_2606 - putative outer membrane lipoprotein 2551 48.28 0 2752047..2752394 - 115 110642767 rplS ECP_2607 - 50S ribosomal protein L19 2552 53.26 0 2752436..2753203 - 255 110642768 trmD ECP_2608 - tRNA (guanine-N(1)-)-methyltransferase 2553 48.82 0 2753234..2753782 - 182 110642769 rimM ECP_2609 - 16S rRNA-processing protein 2554 51.41 0 2753801..2754049 - 82 110642770 rpsP ECP_2610 - 30S ribosomal protein S16 2555 54.26 0 2754186..2755547 - 453 110642771 - ECP_2611 - signal recognition particle protein 2556 51.56 0 2755639..2756505 + 288 110642772 - ECP_2612 - putative cytochrome C-type biogenesis protein 2557 50.51 0 2756550..2757812 + 420 110642773 - ECP_2613 - hypothetical protein 2558 50.67 0 2757867..2758460 - 197 110642774 - ECP_2614 - heat shock protein GrpE 2559 50.17 0 2758583..2759461 + 292 110642775 ppnK ECP_2615 - inorganic polyphosphate/ATP-NAD kinase 2560 51.99 0 2759547..2761208 + 553 110642776 - ECP_2616 - recombination and repair protein 2561 49.71 0 2761357..2761698 + 113 110642777 - ECP_2617 - hypothetical protein 2562 50.17 0 2761761..2762051 - 96 110642778 - ECP_2618 - hypothetical protein 2563 46.12 0 2762041..2762517 - 158 110642779 - ECP_2619 - hypothetical protein 2564 51.35 0 2762649..2763131 + 160 110642780 smpB ECP_2620 - SsrA-binding protein 2565 48.09 0 2763710..2763892 - 60 110642781 - ECP_2621 - hypothetical protein 2566 55.11 0 2764391..2765368 + 325 110642782 - ECP_2622 - hypothetical protein 2567 56.74 +1 2765388..2766656 + 422 110642783 - ECP_2623 - hypothetical protein 2568 56.73 +1 2766679..2768127 + 482 110642784 gabD ECP_2624 - succinate-semialdehyde dehydrogenase I 2569 58.78 +1 2768141..2769421 + 426 110642785 - ECP_2625 - 4-aminobutyrate aminotransferase 2570 51.11 0 2769659..2771059 + 466 110642786 - ECP_2626 - gamma-aminobutyrate transporter 2571 53.09 0 2771080..2771742 + 220 110642787 - ECP_2627 - DNA-binding transcriptional regulator CsiR 2572 48.00 0 2771743..2772192 - 149 110642788 - ECP_2628 - hypothetical protein 2573 51.57 0 2772276..2772434 - 52 110642789 - ECP_2629 - hypothetical protein 2574 52.33 0 2772617..2772916 + 99 110642790 - ECP_2630 - transcriptional regulator YgaV 2575 45.71 0 2772926..2773450 + 174 110642791 - ECP_2631 - hypothetical protein 2576 48.15 0 2773497..2773901 - 134 110642792 - ECP_2632 - DNA binding protein, nucleoid-associated 2577 49.11 0 2774568..2775017 + 149 110642793 - ECP_2633 - hypothetical protein 2578 46.09 0 2775054..2775398 - 114 110642794 - ECP_2634 - hypothetical protein 2579 54.55 0 2775550..2775879 + 109 110642795 - ECP_2635 - hypothetical protein 50.53 MEAN 5.23 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0