version 1.0
Escherichia coli CFT073, complete genome - 1..5231428 5339 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 822 50.84 0 829502..830632 + 376 26246741 gipA c0851 - Peyer's patch-specific virulence factor GipA 823 53.14 0 829652..829858 - 68 26246742 - c0852 - hypothetical protein 824 56.12 +1 830743..832032 - 429 161486276 bioA c0853 - adenosylmethionine--8-amino-7-oxononanoate transaminase 825 55.56 0 830809..831006 + 65 26246744 - c0854 - hypothetical protein 826 54.85 0 832119..833159 + 346 26246745 bioB c0855 - biotin synthase 827 57.66 +1 833156..834310 + 384 26246746 bioF c0856 - 8-amino-7-oxononanoate synthase 828 55.72 0 834258..835052 + 264 26246747 bioC c0857 - putative methyltransferase 829 53.69 0 835045..835722 + 225 26246748 bioD c0858 - dithiobiotin synthetase 830 38.41 -2 835889..836026 - 45 26246749 - c0859 - hypothetical protein 831 53.07 0 836301..838322 + 673 26246750 uvrB c0860 - excinuclease ABC subunit B 832 51.60 0 838360..839328 - 322 26246751 ybhK c0861 - hypothetical protein 833 53.41 0 839584..840654 + 356 26246752 moaA c0862 - molybdenum cofactor biosynthesis protein A 834 52.44 0 840676..841188 + 170 26246753 moaB c0863 - molybdenum cofactor biosynthesis protein B 835 55.89 +1 840930..841421 - 163 26246754 - c0864 - hypothetical protein 836 56.38 +1 841191..841676 + 161 26246755 moaC c0865 - molybdenum cofactor biosynthesis protein C 837 56.10 +1 841669..841914 + 81 161486275 moaD c0866 - molybdopterin synthase small subunit 838 56.07 +1 841916..842368 + 150 26246757 MoaE c0867 - molybdopterin synthase large subunit 839 48.22 0 842424..843209 + 261 26246758 ybhL c0868 - hypothetical protein 840 43.18 -1 843141..843272 - 43 26246759 - c0869 - hypothetical protein 841 40.49 -1 843388..844128 + 246 26246760 ybhM c0870 - hypothetical protein 842 52.25 0 844164..845120 - 318 26246761 ybhN c0871 - hypothetical protein 843 55.56 0 845120..846361 - 413 26246762 ybhO c0872 - cardiolipin synthase 2 844 55.38 0 846358..847119 - 253 26246763 ybhP c0873 - hypothetical protein 845 54.01 0 847252..847662 + 136 26246764 ybhQ c0874 - hypothetical protein 846 52.21 0 847624..848730 - 368 26246765 ybhR c0875 - hypothetical protein 847 55.03 0 848741..849874 - 377 26246766 ybhS c0876 - hypothetical protein 848 55.82 +1 849867..851618 - 583 26246767 ybhF c0877 - ABC transporter ATP-binding protein 849 57.96 +1 851596..852594 - 332 26246768 ybhG c0878 - hypothetical protein 850 52.78 0 852594..853277 - 227 26246769 ybiH c0879 - putative DNA-binding transcriptional regulator 851 56.31 +1 853494..854855 + 453 26246770 rhlE c0880 - ATP-dependent RNA helicase RhlE 852 47.71 0 855088..855393 - 101 26246772 - c0882 - hypothetical protein 853 54.39 0 855392..857542 + 716 26246773 dinG c0883 - ATP-dependent DNA helicase DinG 854 55.56 0 857570..858532 + 320 26246774 ybiB c0884 - hypothetical protein 855 55.25 0 858673..859758 + 361 26246775 ybiC c0885 - hypothetical protein 856 50.19 0 859986..860246 - 86 26246776 ybiJ c0886 - hypothetical protein 857 50.94 0 860511..860777 - 88 26246778 - c0888 - hypothetical protein 858 53.98 0 860851..861528 - 225 161486274 ybiX c0889 - putative hydroxylase 859 53.26 0 861744..864026 - 760 26246780 ybiL c0890 - catecholate siderophore receptor Fiu 860 45.68 0 864291..864695 - 134 26246781 ybiM c0891 - hypothetical protein 861 52.70 0 864737..865753 + 338 26246782 ybiN c0892 - putative SAM-dependent methyltransferase 862 53.14 0 865750..867975 - 741 161486273 ybiO c0893 - hypothetical protein 863 53.94 0 868092..868814 - 240 26246784 glnQ c0894 - glutamine ABC transporter ATP-binding protein 864 53.33 0 868811..869470 - 219 26246785 glnP c0895 - glutamine ABC transporter permease protein 865 48.46 0 869609..870355 - 248 26246786 glnH c0896 - glutamine ABC transporter periplasmic protein 866 43.75 -1 870282..870473 - 63 26246787 - c0897 - hypothetical protein 867 48.41 0 870759..871262 - 167 161486272 dps c0898 - DNA starvation/stationary phase protection protein Dps 868 53.33 0 871563..872462 - 299 26246789 ybiF c0899 - threonine and homoserine efflux system 869 50.96 0 872797..873318 + 173 26246790 ompX c0900 - outer membrane protein X 870 48.93 0 873368..874951 - 527 26246791 ybiP c0901 - hypothetical protein 871 41.86 -1 875223..875351 - 42 26246792 - c0902 - hypothetical protein 872 54.06 0 875537..876004 + 155 26246793 - c0903 - manganese transport regulator MntR 873 51.47 0 876001..877119 + 372 26246794 ybiR c0904 - hypothetical protein 874 52.88 0 877177..878097 - 306 26246795 ybiS c0905 - hypothetical protein 875 52.67 0 878316..879908 + 530 26246796 ybiT c0906 - ABC transporter ATP-binding protein 876 46.45 0 880108..880923 - 271 26246797 ybiV c0907 - hypothetical protein 877 54.25 0 881069..883501 - 810 26246798 ybiW c0908 - putative formate acetyltransferase 3 878 53.18 0 883507..884433 - 308 26246799 - c0909 - putative pyruvate formate-lyase 3 activating enzyme 879 53.54 0 884537..885199 + 220 161486271 mipB c0910 - fructose-6-phosphate aldolase 880 56.13 +1 885275..886024 - 249 26246801 moeB c0911 - molybdopterin biosynthesis protein MoeB 881 56.23 +1 886024..887259 - 411 26246802 moeA c0912 - molybdopterin biosynthesis protein MoeA 882 56.00 +1 887463..888428 + 321 26246803 ybiK c0913 - L-asparaginase 883 54.07 0 888397..890286 + 629 26246804 yliA c0914 - glutathione transporter ATP-binding protein 884 52.86 0 890150..891844 + 564 26246805 - c0915 - putative binding protein yliB precursor 885 53.75 0 891862..892782 + 306 26246806 yliC c0916 - ABC transporter permease 886 53.29 0 892785..893696 + 303 26246807 yliD c0917 - ABC transporter permease 887 41.12 -1 893873..896221 + 782 26246808 yliE c0918 - hypothetical protein 888 42.81 -1 896229..897557 + 442 26246809 yliF c0919 - membrane protein yliF 889 52.26 0 897604..898929 - 441 26246810 yliG c0920 - hypothetical protein 890 48.18 0 899142..899525 + 127 161486270 bssR c0921 - biofilm formation regulatory protein BssR 891 51.61 0 899636..900751 + 371 26246812 yliI c0922 - hypothetical protein 892 51.97 0 900748..901380 - 210 26246813 yliJ c0923 - GST-like protein yliJ 893 51.31 0 901600..902823 + 407 26246814 dacC c0924 - D-alanyl-D-alanine carboxypeptidase fraction C 894 50.33 0 902870..903628 - 252 26246815 deoR c0925 - DNA-binding transcriptional repressor DeoR 895 51.59 0 903686..904282 - 198 26246816 ybjG c0926 - undecaprenyl pyrophosphate phosphatase 896 52.18 0 904537..905799 + 420 26246817 cmr c0927 - multidrug translocase mdfA 897 52.63 0 905840..906124 - 94 26246818 ybjH c0928 - hypothetical protein 898 46.03 0 906210..907028 - 272 26246819 - c0929 - hypothetical protein 899 53.46 0 907025..908296 - 423 26246820 ybjJ c0930 - hypothetical protein 900 50.97 0 908287..908853 + 188 26246821 ybjK c0931 - hypothetical protein 901 47.29 0 909332..910363 - 343 26246822 intT c0932 - integrase for prophage 902 33.95 -2 910450..911421 - 323 26246823 - c0933 - hypothetical protein 903 38.08 -2 911434..912360 - 308 26246824 - c0934 - hypothetical protein 904 42.34 -1 912449..912670 + 73 26246825 coxT c0935 - putative regulator for prophage 905 49.47 0 912649..913212 + 187 26246826 - c0936 - hypothetical protein 906 49.35 0 913190..913420 + 76 26246827 - c0937 - hypothetical protein 907 43.63 -1 913522..913725 + 67 26246828 - c0938 - hypothetical protein 908 52.08 0 913787..914026 + 79 26246829 - c0939 - hypothetical protein 909 56.02 +1 914038..914253 + 71 26246830 - c0940 - hypothetical protein 910 46.62 0 914250..915107 + 285 26246831 - c0941 - DNA adenine methylase 911 53.08 0 915104..917518 + 804 26246832 - c0942 - putative replication protein for prophage 912 45.42 0 917799..918104 + 101 26246833 - c0943 - hypothetical protein 913 43.28 -1 918325..918525 + 66 26246834 - c0944 - hypothetical protein 914 39.85 -1 918529..919311 + 260 26246835 - c0945 - hypothetical protein 915 35.15 -2 919531..920685 + 384 26246836 - c0946 - hypothetical protein 916 50.29 0 920737..921774 - 345 26246837 - c0947 - capsid portal protein 917 56.76 +1 921771..923537 - 588 26246838 - c0948 - terminase, ATPase subunit 918 50.62 0 923547..923708 - 53 26246839 - c0949 - hypothetical protein 919 56.88 +1 923686..924513 + 275 26246840 - c0950 - putative capsid scaffolding protein 920 56.77 +1 924410..925702 - 430 26246841 - c0951 - hypothetical protein 921 55.71 0 924530..925588 + 352 26246842 - c0952 - major capsid protein 50.18 MEAN 5.55 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0