version 1.0
Escherichia coli CFT073, complete genome - 1..5231428 5339 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 34 53.28 0 31001..31822 + 273 26245952 dapB c0037 - dihydrodipicolinate reductase 35 25.60 -2 31864..32031 - 55 26245953 - c0038 - hypothetical protein 36 38.41 -2 32101..32238 + 45 26245954 - c0039 - hypothetical protein 37 53.06 0 32251..33426 + 391 26245955 carA c0040 - carbamoyl phosphate synthase small subunit 38 56.18 +1 33444..36665 + 1073 26245956 carB c0041 - carbamoyl phosphate synthase large subunit 39 36.07 -2 36673..36891 - 72 26245957 - c0042 - hypothetical protein 40 46.72 0 36926..37321 + 131 161486339 caiF c0043 - DNA-binding transcriptional activator CaiF 41 55.07 0 37440..38051 - 203 26245959 caiE c0044 - carnitine operon protein CaiE 42 52.80 0 38036..38929 - 297 26245960 caiD c0045 - carnitinyl-CoA dehydratase 43 50.80 0 38930..40498 - 522 26245961 caiC c0046 - putative crotonobetaine/carnitine-CoA ligase 44 52.46 0 40556..41773 - 405 26245962 caiB c0047 - crotonobetainyl-CoA:carnitine CoA-transferase 45 53.46 0 41901..43043 - 380 26245963 caiA c0048 - crotonobetainyl-CoA dehydrogenase 46 52.41 0 43074..44588 - 504 26245964 caiT c0049 - L-carnitine/gamma-butyrobetaine antiporter 47 51.75 0 45061..45831 + 256 161486338 fixA c0050 - putative electron transfer flavoprotein FixA 48 54.31 0 46809..48095 + 428 26245966 fixC c0053 - putative oxidoreductase FixC 49 57.29 +1 48092..48379 + 95 26245967 fixX c0054 - ferredoxin-like protein 50 53.60 0 48438..49769 + 443 26245968 yaaU c0055 - metabolite transporter 51 54.43 0 49877..50407 + 176 26245969 yabF c0056 - glutathione-regulated potassium-efflux system ancillary protein KefF 52 55.45 0 50400..52262 + 620 26245970 kefC c0057 - glutathione-regulated potassium-efflux system protein KefC 53 52.20 0 52319..52933 + 204 26245971 folA c0058 - dihydrofolate reductase 54 48.72 0 53019..53252 + 77 26245972 - c0059 - putative antitoxin of gyrase inhibiting toxin-antitoxin system 55 46.03 0 53255..53569 + 104 26245973 - c0060 - putative toxin of gyrase inhibiting toxin-antitoxin system 56 55.48 0 53566..54414 - 282 26245974 apaH c0061 - diadenosine tetraphosphatase 57 51.98 0 54385..54738 + 117 26245975 - c0062 - hypothetical protein 58 52.12 0 54421..54798 - 125 26245976 apaG c0063 - ApaG 59 53.77 0 54801..55622 - 273 26245977 ksgA c0064 - dimethyladenosine transferase 60 55.76 +1 55619..56608 - 329 26245978 pdxA c0065 - 4-hydroxythreonine-4-phosphate dehydrogenase 61 53.77 0 56608..57894 - 428 26245979 surA c0066 - peptidyl-prolyl cis-trans isomerase SurA 62 51.72 0 57947..60301 - 784 26245980 imp c0067 - organic solvent tolerance protein 63 52.45 0 60556..61371 + 271 161486337 djlA c0068 - DNA-J like membrane chaperone protein 64 54.24 0 61489..62148 - 219 26245982 yabO c0069 - 23S rRNA/tRNA pseudouridine synthase A 65 55.07 0 62160..65066 - 968 26245983 hepA c0070 - ATP-dependent helicase HepA 66 55.44 0 65231..67582 - 783 26245984 polB c0071 - DNA polymerase II 67 46.08 0 67723..68232 + 169 26245985 - c0072 - transposase 68 55.60 0 68369..69064 - 231 26245986 araD c0073 - L-ribulose-5-phosphate 4-epimerase 69 55.22 0 69349..70851 - 500 26245987 araA c0074 - L-arabinose isomerase 70 58.14 +1 70862..72562 - 566 26245988 araB c0075 - ribulokinase 71 52.96 0 72901..73746 + 281 26245989 araC c0076 - DNA-binding transcriptional regulator AraC 72 47.15 0 74011..74133 + 40 26245990 - c0077 - hypothetical protein 73 34.18 -2 74258..74494 + 78 26245991 - c0078 - hypothetical protein 74 33.51 -2 74536..75108 + 190 26245992 - c0079 - hypothetical protein 75 31.21 -2 75115..75537 + 140 26245993 - c0080 - hypothetical protein 76 54.77 0 75692..76456 + 254 26245994 yabI c0081 - hypothetical protein 77 56.53 +1 76570..77289 - 239 26245995 thiQ c0082 - thiamine transporter ATP-binding subunit 78 57.98 +1 77252..78862 - 536 26245996 thiP c0083 - thiamine transporter membrane protein 79 51.83 0 78838..79821 - 327 161486336 tbpA c0084 - thiamine transporter substrate binding subunit 80 55.34 0 79985..81661 - 558 26245998 yabN c0085 - transcriptional regulator SgrR 81 46.27 0 82026..82535 + 169 26245999 - c0086 - transposase 82 51.82 0 82679..83284 - 201 26246000 leuD c0087 - isopropylmalate isomerase small subunit 83 52.69 0 82730..82915 + 61 26246001 - c0088 - hypothetical protein 84 55.60 0 83295..84695 - 466 26246002 leuC c0089 - isopropylmalate isomerase large subunit 85 54.85 0 84698..85789 - 363 161486335 leuB c0090 - 3-isopropylmalate dehydrogenase 86 52.91 0 85789..87402 - 537 26246004 leuA c0091 - 2-isopropylmalate synthase 87 47.13 0 87451..87537 - 28 26246005 leuL c5492 - leu operon leader peptide 88 30.08 -2 87996..88118 + 40 26246006 - c0092 - hypothetical protein 89 46.21 0 88177..89139 + 320 161486334 leuO c0093 - leucine transcriptional activator 90 24.81 -2 89175..89303 - 42 26246008 - c0094 - hypothetical protein 91 53.16 0 89457..91181 + 574 161486333 ilvI c0095 - acetolactate synthase 3 catalytic subunit 92 50.00 0 91184..91675 + 163 161486332 ilvH c0096 - acetolactate synthase 3 regulatory subunit 93 45.98 0 91687..91773 + 28 26246011 fruL c5493 - hypothetical protein 94 39.39 -1 91727..91858 + 43 26246012 - c0097 - hypothetical protein 95 55.12 0 91855..92859 + 334 26246013 fruR c0098 - DNA-binding transcriptional regulator FruR 96 52.73 0 93425..93919 + 164 26246014 yabB c0099 - cell division protein MraZ 97 55.31 0 93921..94862 + 313 26246015 mraW c0100 - S-adenosyl-methyltransferase MraW 98 50.55 0 94859..95224 + 121 26246016 ftsL c0101 - cell division protein FtsL 99 53.71 0 95240..97006 + 588 26246017 ftsI c0102 - peptidoglycan synthetase ftsI precursor 100 57.06 +1 96993..98480 + 495 26246018 murE c0103 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 101 53.94 0 98477..99835 + 452 26246019 murF c0104 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 102 53.46 0 99829..100911 + 360 26246020 mraY c0105 - phospho-N-acetylmuramoyl-pentapeptide-transferase 103 55.05 0 100914..102230 + 438 26246021 murD c0106 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 104 52.72 0 102227..103474 + 415 26246022 ftsW c0107 - cell division protein FtsW 105 56.09 +1 103471..104538 + 355 26246023 murG c0108 - N-acetylglucosaminyl transferase 106 54.61 0 104592..106067 + 491 26246024 murC c0109 - UDP-N-acetylmuramate--L-alanine ligase 107 51.36 0 106060..106980 + 306 26246025 ddl c0110 - D-alanine--D-alanine ligase 108 53.19 0 106982..107812 + 276 26246026 ftsQ c0111 - cell division protein FtsQ 109 52.18 0 107809..109071 + 420 26246027 ftsA c0112 - cell division protein FtsA 110 53.56 0 109132..110283 + 383 26246028 ftsZ c0113 - cell division protein FtsZ 111 50.87 0 110384..111301 + 305 26246029 lpxC c0114 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 112 54.19 0 111532..112044 + 170 161486331 yacA c0115 - SecA regulator SecM 113 52.11 0 112106..114811 + 901 26246031 secA c0116 - preprotein translocase subunit SecA 114 49.37 0 114871..115269 + 132 26246032 mutT c0117 - nucleoside triphosphate pyrophosphohydrolase 115 46.36 0 115372..115893 + 173 26246033 - c0118 - hypothetical protein 116 48.96 0 115993..116715 + 240 26246034 - c0119 - transposase insK 117 51.52 0 116785..116982 + 65 26246035 - c0120 - hypothetical protein 118 51.52 0 116788..116985 - 65 26246036 yacG c0121 - zinc-binding protein 119 51.48 0 116995..117738 - 247 26246037 yacF c0122 - hypothetical protein 120 52.66 0 117738..118358 - 206 26246038 coaE c0123 - dephospho-CoA kinase 121 51.63 0 118583..119626 + 347 26246039 guaC c0124 - guanosine 5'-monophosphate oxidoreductase 122 52.20 0 119661..120863 - 400 26246040 hofC c0125 - type IV pilin biogenesis protein 123 53.61 0 120853..122238 - 461 26246041 hofB c0126 - hypothetical protein 124 52.61 0 122248..122688 - 146 26246042 ppdD c0127 - putative major pilin subunit 125 53.02 0 122892..123785 - 297 161486330 nadC c0128 - quinolinate phosphoribosyltransferase 126 54.35 0 123873..124424 + 183 26246044 ampD c0129 - N-acetyl-anhydromuranmyl-L-alanine amidase 127 51.46 0 124421..125275 + 284 26246045 ampE c0130 - regulatory protein AmpE 128 52.59 0 125318..126688 - 456 26246046 aroP c0131 - aromatic amino acid transporter 129 33.00 -2 128997..129293 + 98 26246047 - c0133 - hypothetical protein 130 27.78 -2 129267..129410 - 47 26246048 - c0134 - hypothetical protein 131 30.08 -2 129968..130090 - 40 26246049 - c0136 - hypothetical protein 132 38.49 -2 130380..130670 + 96 26246050 - c0137 - hypothetical protein 133 53.52 0 131044..131370 + 108 26246051 - c0138 - hypothetical protein 50.18 MEAN 5.55 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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